
Microexon ID | Ps_NC_039367.1:17951865-17951873:- |
Species | Papaver somniferum | Coordinates | NC_039367.1:17951865..17951873 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTTTTTAG |
Microexon Amino Acid seq | VFLG |
Microexon-tag DNA Seq | TGGGATAACAGCTACATAAGAGAAGGTCATAGACGTAAAGGCAAGCAAGTGTTTTTAGGTCAATATGACAATGAGGAGAAAGCAGCGCAGTCTTATGACCTTGTAGCT |
Microexon-tag Amino Acid Seq | WDNSYIREGHRRKGKQVFLGQYDNEEKAAQSYDLVA |
Microexon-tag spanning region | 17951705-17952553 |
Microexon-tag prediction score | 0.8998 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026567790.1x |
Reference Transcript ID | XM_026567790.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026567790.1 |
Protein ID | XP_026423575.1 |
Gene ID | LOC113319538 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.9e-10 |
Motif start | 203 |
Motif end | 262 |
Protein seq | >XP_026423575.1 MAFMNLLDERSSLDDEEHFNTNIFIKLQDSDEGCFESSFLESAQSTVPFIVVNEKPSDYMVSLVNPTVNENCDGAPSDDT ELEPHPSLADEQAPELLRIQAVGQEVYGVCRPTNTESKSLSRSENEKILEREDVSLSTNSCHEENAESQNSQPVLVSGTA MFLNLDHADDLVCSDEEKNLGEFVPPDVSTPIKSIQKVAHRTSKYHGVTRHFWTGKFEAHLWDNSYIREGHRRKGKQVFL GQYDNEEKAAQSYDLVALKYWGLHASTRSNFPISTYKKQLEEMKEMSKEEFVMYIRRNSCFKKGSSVYRGVTRHGDGRWQ ARISGIPGRRGLHLGTFSSEEDAAKAYDIASIRYRGMKAFTNFHVSNYSPLDSKESEGQLPEPKKLKKDVNLTESTIVIA KSDPRQDVRTQTV* |
CDS seq | >XM_026567790.1 ATGGCATTTATGAATCTACTAGATGAGCGGTCCAGTTTGGACGATGAGGAGCATTTTAATACTAATATATTCATTAAACT TCAAGATTCTGATGAGGGATGTTTTGAATCTTCATTCCTGGAAAGTGCACAATCAACAGTTCCTTTTATAGTAGTTAATG AGAAACCTTCAGATTATATGGTATCACTTGTAAATCCAACTGTGAATGAAAACTGTGATGGCGCACCTTCAGATGATACT GAATTAGAACCTCATCCCAGCTTGGCAGATGAACAAGCACCAGAGCTTTTACGAATACAGGCGGTGGGCCAGGAAGTATA CGGGGTTTGTAGACCAACTAACACTGAGTCTAAGTCTCTTTCTAGATCAGAGAATGAGAAAATTCTAGAGAGGGAAGACG TTTCTCTTAGTACCAATTCATGTCATGAGGAAAATGCTGAGTCACAGAATTCTCAGCCTGTTCTGGTTTCAGGCACTGCG ATGTTCTTGAATTTAGACCATGCTGACGACCTTGTTTGCAGTGATGAGGAAAAGAACCTTGGGGAGTTTGTTCCTCCCGA TGTTTCTACTCCAATAAAATCAATTCAGAAGGTTGCCCACCGAACATCAAAATACCATGGAGTTACTAGACACTTTTGGA CTGGAAAATTTGAAGCACACCTATGGGATAACAGCTACATAAGAGAAGGTCATAGACGTAAAGGCAAGCAAGTGTTTTTA GGTCAATATGACAATGAGGAGAAAGCAGCGCAGTCTTATGACCTTGTAGCTCTCAAATACTGGGGTCTTCATGCAAGTAC CAGATCAAATTTCCCTATTTCTACTTACAAGAAACAACTCGAAGAGATGAAGGAAATGTCAAAAGAGGAGTTTGTCATGT ACATTAGGAGGAATAGTTGCTTCAAAAAAGGATCTTCTGTTTATAGAGGCGTGACAAGACATGGAGATGGCCGGTGGCAA GCTCGAATAAGTGGAATACCTGGAAGAAGGGGACTTCACCTTGGGACATTCAGTAGTGAGGAAGATGCTGCTAAAGCTTA CGATATCGCTTCTATCAGATATAGAGGCATGAAGGCTTTCACAAATTTTCATGTCAGTAACTATTCTCCACTGGATTCAA AAGAATCAGAGGGACAACTACCTGAACCAAAAAAACTAAAGAAGGATGTTAATCTTACTGAGTCTACAATTGTTATTGCT AAGTCAGATCCTCGCCAGGATGTTAGAACTCAGACAGTATGA |
Microexon DNA seq | TGTTTTTAG |
Microexon Amino Acid seq | VFLG |
Microexon-tag DNA Seq | TGGGATAACAGCTACATAAGAGAAGGTCATAGACGTAAAGGCAAGCAAGTGTTTTTAGGTCAATATGACAATGAGGAGAAAGCAGCGCAGTCTTATGACCTTGTAGCT |
Microexon-tag Amino Acid seq | WDNSYIREGHRRKGKQVFLGQYDNEEKAAQSYDLVA |
Transcript ID | XM_026567790.1 |
Gene ID | Ps.59809 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.9e-10 |
Motif start | 203 |
Motif end | 262 |
Protein seq | >XM_026567790.1 MAFMNLLDERSSLDDEEHFNTNIFIKLQDSDEGCFESSFLESAQSTVPFIVVNEKPSDYMVSLVNPTVNENCDGAPSDDT ELEPHPSLADEQAPELLRIQAVGQEVYGVCRPTNTESKSLSRSENEKILEREDVSLSTNSCHEENAESQNSQPVLVSGTA MFLNLDHADDLVCSDEEKNLGEFVPPDVSTPIKSIQKVAHRTSKYHGVTRHFWTGKFEAHLWDNSYIREGHRRKGKQVFL GQYDNEEKAAQSYDLVALKYWGLHASTRSNFPISTYKKQLEEMKEMSKEEFVMYIRRNSCFKKGSSVYRGVTRHGDGRWQ ARISGIPGRRGLHLGTFSSEEDAAKAYDIASIRYRGMKAFTNFHVSNYSPLDSKESEGQLPEPKKLKKDVNLTESTIVIA KSDPRQDVRTQTV* |
CDS seq | >XM_026567790.1 ATGGCATTTATGAATCTACTAGATGAGCGGTCCAGTTTGGACGATGAGGAGCATTTTAATACTAATATATTCATTAAACT TCAAGATTCTGATGAGGGATGTTTTGAATCTTCATTCCTGGAAAGTGCACAATCAACAGTTCCTTTTATAGTAGTTAATG AGAAACCTTCAGATTATATGGTATCACTTGTAAATCCAACTGTGAATGAAAACTGTGATGGCGCACCTTCAGATGATACT GAATTAGAACCTCATCCCAGCTTGGCAGATGAACAAGCACCAGAGCTTTTACGAATACAGGCGGTGGGCCAGGAAGTATA CGGGGTTTGTAGACCAACTAACACTGAGTCTAAGTCTCTTTCTAGATCAGAGAATGAGAAAATTCTAGAGAGGGAAGACG TTTCTCTTAGTACCAATTCATGTCATGAGGAAAATGCTGAGTCACAGAATTCTCAGCCTGTTCTGGTTTCAGGCACTGCG ATGTTCTTGAATTTAGACCATGCTGACGACCTTGTTTGCAGTGATGAGGAAAAGAACCTTGGGGAGTTTGTTCCTCCCGA TGTTTCTACTCCAATAAAATCAATTCAGAAGGTTGCCCACCGAACATCAAAATACCATGGAGTTACTAGACACTTTTGGA CTGGAAAATTTGAAGCACACCTATGGGATAACAGCTACATAAGAGAAGGTCATAGACGTAAAGGCAAGCAAGTGTTTTTA GGTCAATATGACAATGAGGAGAAAGCAGCGCAGTCTTATGACCTTGTAGCTCTCAAATACTGGGGTCTTCATGCAAGTAC CAGATCAAATTTCCCTATTTCTACTTACAAGAAACAACTCGAAGAGATGAAGGAAATGTCAAAAGAGGAGTTTGTCATGT ACATTAGGAGGAATAGTTGCTTCAAAAAAGGATCTTCTGTTTATAGAGGCGTGACAAGACATGGAGATGGCCGGTGGCAA GCTCGAATAAGTGGAATACCTGGAAGAAGGGGACTTCACCTTGGGACATTCAGTAGTGAGGAAGATGCTGCTAAAGCTTA CGATATCGCTTCTATCAGATATAGAGGCATGAAGGCTTTCACAAATTTTCATGTCAGTAACTATTCTCCACTGGATTCAA AAGAATCAGAGGGACAACTACCTGAACCAAAAAAACTAAAGAAGGATGTTAATCTTACTGAGTCTACAATTGTTATTGCT AAGTCAGATCCTCGCCAGGATGTTAGAACTCAGACAGTATGA |