
Microexon ID | Ps_NC_039367.1:17897353-17897361:- |
Species | Papaver somniferum | Coordinates | NC_039367.1:17897353..17897361 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TATATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACACTACCATAAGTGAAACCCGGAAACGCAAAGGAAAGCAAGTATATCTTGGTGGATATGAAACTGAAGAGAAAGCAGCACAAGCATATGACCTTGCAGCT |
Microexon-tag Amino Acid Seq | WDNTTISETRKRKGKQVYLGGYETEEKAAQAYDLAA |
Microexon-tag spanning region | 17897208-17898019 |
Microexon-tag prediction score | 0.9423 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026566716.1x |
Reference Transcript ID | XM_026566716.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026566716.1 |
Protein ID | XP_026422501.1 |
Gene ID | LOC113318548 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 4.9e-11 |
Motif start | 82 |
Motif end | 144 |
Protein seq | >XP_026422501.1 MGTLIPASENEICLLNQEVSLIDQVSIVADYERLPSSNDSSSKLIPPPSSSSSVNVNPASSSATGNEQVKKALYKVGQRT SNFRGVTSLFCRHRWTGKFEAHLWDNTTISETRKRKGKQVYLGGYETEEKAAQAYDLAALKLWGAGAHSKMNFPIPNYAK EVEEMKDMSREEYINSLRRKSICFARGNSIYRGVTRQHEGRRWQARIGRVAGGRDIYLGTYDTEEEAAEAYDIAAVKLRG MSAITNFHISNYYKEGSKELDIVPIDVTEKELPKVKIRRFIMP* |
CDS seq | >XM_026566716.1 ATGGGAACTCTGATTCCTGCTTCAGAAAATGAGATATGTTTATTAAACCAGGAGGTATCCCTTATAGACCAAGTTTCAAT AGTGGCAGACTATGAGAGATTACCTTCTTCCAATGATTCATCTTCTAAATTAATTCCACCACCATCAAGTAGCAGTAGTG TTAATGTAAATCCTGCAAGCAGTAGTGCAACTGGAAACGAACAAGTAAAGAAGGCATTATATAAAGTTGGTCAGAGAACA TCGAATTTTCGTGGAGTTACTAGTTTGTTCTGCAGACACAGATGGACTGGCAAATTTGAAGCACATCTTTGGGATAACAC TACCATAAGTGAAACCCGGAAACGCAAAGGAAAGCAAGTATATCTTGGTGGATATGAAACTGAAGAGAAAGCAGCACAAG CATATGACCTTGCAGCTTTAAAGTTGTGGGGAGCAGGAGCACATTCTAAAATGAACTTCCCAATTCCCAATTATGCAAAA GAAGTTGAGGAAATGAAAGACATGTCACGTGAGGAGTATATTAATTCTCTAAGAAGGAAAAGCATTTGCTTTGCAAGAGG CAATTCGATTTATAGAGGAGTCACAAGACAACATGAAGGTCGTCGATGGCAAGCTAGAATTGGTAGGGTGGCAGGTGGTA GAGATATCTATCTTGGAACATATGACACCGAGGAGGAAGCTGCAGAGGCGTATGATATTGCGGCCGTTAAACTTCGAGGA ATGAGTGCCATTACCAATTTTCATATCAGTAACTACTACAAGGAAGGCTCAAAGGAACTGGATATTGTCCCTATAGACGT TACAGAGAAAGAGCTTCCGAAAGTGAAAATTAGAAGATTCATAATGCCGTGA |
Microexon DNA seq | TATATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACACTACCATAAGTGAAACCCGGAAACGCAAAGGAAAGCAAGTATATCTTGGTGGATATGAAACTGAAGAGAAAGCAGCACAAGCATATGACCTTGCAGCT |
Microexon-tag Amino Acid seq | WDNTTISETRKRKGKQVYLGGYETEEKAAQAYDLAA |
Transcript ID | XM_026566716.1 |
Gene ID | Ps.59806 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 4.9e-11 |
Motif start | 82 |
Motif end | 144 |
Protein seq | >XM_026566716.1 MGTLIPASENEICLLNQEVSLIDQVSIVADYERLPSSNDSSSKLIPPPSSSSSVNVNPASSSATGNEQVKKALYKVGQRT SNFRGVTSLFCRHRWTGKFEAHLWDNTTISETRKRKGKQVYLGGYETEEKAAQAYDLAALKLWGAGAHSKMNFPIPNYAK EVEEMKDMSREEYINSLRRKSICFARGNSIYRGVTRQHEGRRWQARIGRVAGGRDIYLGTYDTEEEAAEAYDIAAVKLRG MSAITNFHISNYYKEGSKELDIVPIDVTEKELPKVKIRRFIMP* |
CDS seq | >XM_026566716.1 ATGGGAACTCTGATTCCTGCTTCAGAAAATGAGATATGTTTATTAAACCAGGAGGTATCCCTTATAGACCAAGTTTCAAT AGTGGCAGACTATGAGAGATTACCTTCTTCCAATGATTCATCTTCTAAATTAATTCCACCACCATCAAGTAGCAGTAGTG TTAATGTAAATCCTGCAAGCAGTAGTGCAACTGGAAACGAACAAGTAAAGAAGGCATTATATAAAGTTGGTCAGAGAACA TCGAATTTTCGTGGAGTTACTAGTTTGTTCTGCAGACACAGATGGACTGGCAAATTTGAAGCACATCTTTGGGATAACAC TACCATAAGTGAAACCCGGAAACGCAAAGGAAAGCAAGTATATCTTGGTGGATATGAAACTGAAGAGAAAGCAGCACAAG CATATGACCTTGCAGCTTTAAAGTTGTGGGGAGCAGGAGCACATTCTAAAATGAACTTCCCAATTCCCAATTATGCAAAA GAAGTTGAGGAAATGAAAGACATGTCACGTGAGGAGTATATTAATTCTCTAAGAAGGAAAAGCATTTGCTTTGCAAGAGG CAATTCGATTTATAGAGGAGTCACAAGACAACATGAAGGTCGTCGATGGCAAGCTAGAATTGGTAGGGTGGCAGGTGGTA GAGATATCTATCTTGGAACATATGACACCGAGGAGGAAGCTGCAGAGGCGTATGATATTGCGGCCGTTAAACTTCGAGGA ATGAGTGCCATTACCAATTTTCATATCAGTAACTACTACAAGGAAGGCTCAAAGGAACTGGATATTGTCCCTATAGACGT TACAGAGAAAGAGCTTCCGAAAGTGAAAATTAGAAGATTCATAATGCCGTGA |