Microexon ID Ps_NC_039367.1:17897353-17897361:-
Species Papaver somniferum
Coordinates NC_039367.1:17897353..17897361
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TATATCTTG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAACACTACCATAAGTGAAACCCGGAAACGCAAAGGAAAGCAAGTATATCTTGGTGGATATGAAACTGAAGAGAAAGCAGCACAAGCATATGACCTTGCAGCT
Microexon-tag Amino Acid Seq WDNTTISETRKRKGKQVYLGGYETEEKAAQAYDLAA
Microexon-tag spanning region17897208-17898019
Microexon-tag prediction score0.9423
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026566716.1x
Reference Transcript ID XM_026566716.1
Gene ID NA
Gene Name NA
Transcript ID XM_026566716.1
Protein ID XP_026422501.1
Gene ID LOC113318548
Gene Name NA
Pfam domain motif AP2
Motif E-value 4.9e-11
Motif start 82
Motif end 144
Protein seq >XP_026422501.1
MGTLIPASENEICLLNQEVSLIDQVSIVADYERLPSSNDSSSKLIPPPSSSSSVNVNPASSSATGNEQVKKALYKVGQRT
SNFRGVTSLFCRHRWTGKFEAHLWDNTTISETRKRKGKQVYLGGYETEEKAAQAYDLAALKLWGAGAHSKMNFPIPNYAK
EVEEMKDMSREEYINSLRRKSICFARGNSIYRGVTRQHEGRRWQARIGRVAGGRDIYLGTYDTEEEAAEAYDIAAVKLRG
MSAITNFHISNYYKEGSKELDIVPIDVTEKELPKVKIRRFIMP*
CDS seq >XM_026566716.1
ATGGGAACTCTGATTCCTGCTTCAGAAAATGAGATATGTTTATTAAACCAGGAGGTATCCCTTATAGACCAAGTTTCAAT
AGTGGCAGACTATGAGAGATTACCTTCTTCCAATGATTCATCTTCTAAATTAATTCCACCACCATCAAGTAGCAGTAGTG
TTAATGTAAATCCTGCAAGCAGTAGTGCAACTGGAAACGAACAAGTAAAGAAGGCATTATATAAAGTTGGTCAGAGAACA
TCGAATTTTCGTGGAGTTACTAGTTTGTTCTGCAGACACAGATGGACTGGCAAATTTGAAGCACATCTTTGGGATAACAC
TACCATAAGTGAAACCCGGAAACGCAAAGGAAAGCAAGTATATCTTGGTGGATATGAAACTGAAGAGAAAGCAGCACAAG
CATATGACCTTGCAGCTTTAAAGTTGTGGGGAGCAGGAGCACATTCTAAAATGAACTTCCCAATTCCCAATTATGCAAAA
GAAGTTGAGGAAATGAAAGACATGTCACGTGAGGAGTATATTAATTCTCTAAGAAGGAAAAGCATTTGCTTTGCAAGAGG
CAATTCGATTTATAGAGGAGTCACAAGACAACATGAAGGTCGTCGATGGCAAGCTAGAATTGGTAGGGTGGCAGGTGGTA
GAGATATCTATCTTGGAACATATGACACCGAGGAGGAAGCTGCAGAGGCGTATGATATTGCGGCCGTTAAACTTCGAGGA
ATGAGTGCCATTACCAATTTTCATATCAGTAACTACTACAAGGAAGGCTCAAAGGAACTGGATATTGTCCCTATAGACGT
TACAGAGAAAGAGCTTCCGAAAGTGAAAATTAGAAGATTCATAATGCCGTGA
Microexon DNA seq TATATCTTG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAACACTACCATAAGTGAAACCCGGAAACGCAAAGGAAAGCAAGTATATCTTGGTGGATATGAAACTGAAGAGAAAGCAGCACAAGCATATGACCTTGCAGCT
Microexon-tag Amino Acid seq WDNTTISETRKRKGKQVYLGGYETEEKAAQAYDLAA
Transcript ID XM_026566716.1
Gene ID Ps.59806
Gene Name NA
Pfam domain motif AP2
Motif E-value 4.9e-11
Motif start 82
Motif end 144
Protein seq >XM_026566716.1
MGTLIPASENEICLLNQEVSLIDQVSIVADYERLPSSNDSSSKLIPPPSSSSSVNVNPASSSATGNEQVKKALYKVGQRT
SNFRGVTSLFCRHRWTGKFEAHLWDNTTISETRKRKGKQVYLGGYETEEKAAQAYDLAALKLWGAGAHSKMNFPIPNYAK
EVEEMKDMSREEYINSLRRKSICFARGNSIYRGVTRQHEGRRWQARIGRVAGGRDIYLGTYDTEEEAAEAYDIAAVKLRG
MSAITNFHISNYYKEGSKELDIVPIDVTEKELPKVKIRRFIMP*
CDS seq >XM_026566716.1
ATGGGAACTCTGATTCCTGCTTCAGAAAATGAGATATGTTTATTAAACCAGGAGGTATCCCTTATAGACCAAGTTTCAAT
AGTGGCAGACTATGAGAGATTACCTTCTTCCAATGATTCATCTTCTAAATTAATTCCACCACCATCAAGTAGCAGTAGTG
TTAATGTAAATCCTGCAAGCAGTAGTGCAACTGGAAACGAACAAGTAAAGAAGGCATTATATAAAGTTGGTCAGAGAACA
TCGAATTTTCGTGGAGTTACTAGTTTGTTCTGCAGACACAGATGGACTGGCAAATTTGAAGCACATCTTTGGGATAACAC
TACCATAAGTGAAACCCGGAAACGCAAAGGAAAGCAAGTATATCTTGGTGGATATGAAACTGAAGAGAAAGCAGCACAAG
CATATGACCTTGCAGCTTTAAAGTTGTGGGGAGCAGGAGCACATTCTAAAATGAACTTCCCAATTCCCAATTATGCAAAA
GAAGTTGAGGAAATGAAAGACATGTCACGTGAGGAGTATATTAATTCTCTAAGAAGGAAAAGCATTTGCTTTGCAAGAGG
CAATTCGATTTATAGAGGAGTCACAAGACAACATGAAGGTCGTCGATGGCAAGCTAGAATTGGTAGGGTGGCAGGTGGTA
GAGATATCTATCTTGGAACATATGACACCGAGGAGGAAGCTGCAGAGGCGTATGATATTGCGGCCGTTAAACTTCGAGGA
ATGAGTGCCATTACCAATTTTCATATCAGTAACTACTACAAGGAAGGCTCAAAGGAACTGGATATTGTCCCTATAGACGT
TACAGAGAAAGAGCTTCCGAAAGTGAAAATTAGAAGATTCATAATGCCGTGA