
Microexon ID | Ps_NC_039366.1:77632844-77632852:+ |
Species | Papaver somniferum | Coordinates | NC_039366.1:77632844..77632852 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGCCGTAGAGAGGGTCAATCAAGAAAAGGTCGACAAGTCTATCTTGGTGGGTATGACAGGGAAGAAAAAGCTGCCAGGGCTTATGATTTGGCTGCT |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDREEKAARAYDLAA |
Microexon-tag spanning region | 77632648-77633317 |
Microexon-tag prediction score | 0.9524 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026563162.1x |
Reference Transcript ID | XM_026563162.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026563162.1 |
Protein ID | XP_026418947.1 |
Gene ID | LOC113314365 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.3e-12 |
Motif start | 173 |
Motif end | 231 |
Protein seq | >XP_026418947.1 MGSMNNNWLSFPLSPVHSSLSHLHSSQNNQFSLGLVTDGMDHSFENPADWNLMNAHGGGVGDEVPKVADFLGVEKSDNHN DSLVFNQIPTPTQADYLLSNCNPQVTDISPSDGSAKDFKSSQGNVGNLQSLTLSMGTGKGSNTTDEGNSAITTTVVEEAP RRAIDTFGQRTSIYRGVTKHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDREEKAARAYDLAALKYWGTSTTTNFPI SIYEKELEEMKNMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAA IKFRGLNAVTNFDMNRYDVKSILESNTLPIGGASKRLKETQDTETLRKREEIKAIGSSFYDGNSTVGGFQGYPMVPPFEQ TSQPLLALQNQQSYHHYTQEAPHLQNYMQTHQLLHNPNSTSSLLHSSQSGSQFHQGFYQNQPTMLHGLMTMGSSSSLMGS NGSSSNGYDEAAYFGNGLGLTATSSSTGNAGAGIGSMTDLALVKVDYDINSGGYGGWPAETVHGNGANPGSFTMWNDN* |
CDS seq | >XM_026563162.1 ATGGGTTCAATGAACAATAACTGGCTTTCATTTCCTCTTTCTCCAGTTCACTCTTCCTTATCTCATTTGCATTCATCTCA AAATAATCAGTTCTCGCTTGGGTTAGTAACCGATGGTATGGACCACTCTTTCGAAAACCCTGCTGATTGGAACTTGATGA ATGCTCATGGTGGCGGTGTCGGCGATGAAGTCCCGAAAGTTGCAGATTTTCTTGGTGTTGAGAAATCAGATAACCATAAT GACTCATTAGTATTCAATCAAATACCTACACCAACTCAAGCAGATTATCTCTTGTCTAACTGCAATCCTCAAGTTACCGA CATATCTCCTTCTGATGGCAGTGCCAAAGACTTTAAATCTTCTCAAGGAAATGTTGGAAATTTGCAGTCACTAACACTGT CTATGGGCACTGGTAAGGGTTCAAACACAACTGATGAAGGAAATAGCGCTATTACCACCACTGTTGTTGAAGAAGCACCA AGAAGGGCTATTGATACATTTGGGCAACGAACTTCTATATACCGAGGTGTAACAAAGCATAGATGGACTGGTCGATATGA AGCTCATCTTTGGGATAATAGTTGCCGTAGAGAGGGTCAATCAAGAAAAGGTCGACAAGTCTATCTTGGTGGGTATGACA GGGAAGAAAAAGCTGCCAGGGCTTATGATTTGGCTGCTCTGAAGTACTGGGGAACCTCTACAACAACAAATTTTCCTATA AGTATTTATGAAAAGGAATTAGAAGAAATGAAGAATATGACTAGGCAAGAATTTGTTGCATCTCTCAGAAGGAAAAGTAG CGGTTTTTCTAGGGGTGCTTCCATGTATCGTGGAGTTACAAGGCACCATCAACATGGTAGATGGCAAGCAAGGATTGGGA GGGTGGCTGGAAACAAGGACCTATACTTGGGCACATTCAGTACTGAAGAGGAAGCAGCGGAGGCTTATGATATTGCTGCA ATAAAGTTCAGAGGATTGAATGCGGTAACTAACTTCGACATGAACAGATATGATGTTAAAAGCATACTTGAAAGCAACAC ACTACCCATTGGAGGAGCATCTAAGCGATTAAAGGAGACTCAGGACACCGAAACACTGCGTAAGAGAGAGGAAATTAAAG CTATTGGTTCGAGCTTCTACGATGGAAATTCAACGGTTGGTGGATTCCAAGGTTATCCAATGGTACCTCCGTTTGAACAA ACTTCTCAGCCATTACTAGCTTTACAAAACCAACAGAGTTATCATCATTATACCCAAGAGGCGCCACATCTTCAAAATTA CATGCAAACTCATCAGTTGCTCCATAACCCTAATAGCACTTCTTCTTTACTTCATTCAAGCCAAAGTGGGTCTCAATTTC ATCAAGGTTTTTATCAAAATCAACCTACCATGCTACACGGTTTAATGACAATGGGTTCATCTTCATCGTTGATGGGAAGT AATGGAAGTTCCAGCAATGGTTATGATGAGGCTGCATATTTTGGTAACGGGCTTGGATTGACGGCAACTTCATCGTCAAC AGGAAATGCTGGTGCTGGTATTGGATCAATGACAGATCTTGCACTCGTTAAAGTTGATTATGACATCAACTCTGGTGGCT ATGGCGGATGGCCAGCGGAAACCGTTCATGGAAATGGTGCAAACCCAGGCTCATTTACAATGTGGAATGATAATTGA |
Microexon DNA seq | TCTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGCCGTAGAGAGGGTCAATCAAGAAAAGGTCGACAAGTCTATCTTGGTGGGTATGACAGGGAAGAAAAAGCTGCCAGGGCTTATGATTTGGCTGCT |
Microexon-tag Amino Acid seq | WDNSCRREGQSRKGRQVYLGGYDREEKAARAYDLAA |
Transcript ID | XM_026563162.1 |
Gene ID | Ps.55685 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.3e-12 |
Motif start | 173 |
Motif end | 231 |
Protein seq | >XM_026563162.1 MGSMNNNWLSFPLSPVHSSLSHLHSSQNNQFSLGLVTDGMDHSFENPADWNLMNAHGGGVGDEVPKVADFLGVEKSDNHN DSLVFNQIPTPTQADYLLSNCNPQVTDISPSDGSAKDFKSSQGNVGNLQSLTLSMGTGKGSNTTDEGNSAITTTVVEEAP RRAIDTFGQRTSIYRGVTKHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDREEKAARAYDLAALKYWGTSTTTNFPI SIYEKELEEMKNMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAA IKFRGLNAVTNFDMNRYDVKSILESNTLPIGGASKRLKETQDTETLRKREEIKAIGSSFYDGNSTVGGFQGYPMVPPFEQ TSQPLLALQNQQSYHHYTQEAPHLQNYMQTHQLLHNPNSTSSLLHSSQSGSQFHQGFYQNQPTMLHGLMTMGSSSSLMGS NGSSSNGYDEAAYFGNGLGLTATSSSTGNAGAGIGSMTDLALVKVDYDINSGGYGGWPAETVHGNGANPGSFTMWNDN* |
CDS seq | >XM_026563162.1 ATGGGTTCAATGAACAATAACTGGCTTTCATTTCCTCTTTCTCCAGTTCACTCTTCCTTATCTCATTTGCATTCATCTCA AAATAATCAGTTCTCGCTTGGGTTAGTAACCGATGGTATGGACCACTCTTTCGAAAACCCTGCTGATTGGAACTTGATGA ATGCTCATGGTGGCGGTGTCGGCGATGAAGTCCCGAAAGTTGCAGATTTTCTTGGTGTTGAGAAATCAGATAACCATAAT GACTCATTAGTATTCAATCAAATACCTACACCAACTCAAGCAGATTATCTCTTGTCTAACTGCAATCCTCAAGTTACCGA CATATCTCCTTCTGATGGCAGTGCCAAAGACTTTAAATCTTCTCAAGGAAATGTTGGAAATTTGCAGTCACTAACACTGT CTATGGGCACTGGTAAGGGTTCAAACACAACTGATGAAGGAAATAGCGCTATTACCACCACTGTTGTTGAAGAAGCACCA AGAAGGGCTATTGATACATTTGGGCAACGAACTTCTATATACCGAGGTGTAACAAAGCATAGATGGACTGGTCGATATGA AGCTCATCTTTGGGATAATAGTTGCCGTAGAGAGGGTCAATCAAGAAAAGGTCGACAAGTCTATCTTGGTGGGTATGACA GGGAAGAAAAAGCTGCCAGGGCTTATGATTTGGCTGCTCTGAAGTACTGGGGAACCTCTACAACAACAAATTTTCCTATA AGTATTTATGAAAAGGAATTAGAAGAAATGAAGAATATGACTAGGCAAGAATTTGTTGCATCTCTCAGAAGGAAAAGTAG CGGTTTTTCTAGGGGTGCTTCCATGTATCGTGGAGTTACAAGGCACCATCAACATGGTAGATGGCAAGCAAGGATTGGGA GGGTGGCTGGAAACAAGGACCTATACTTGGGCACATTCAGTACTGAAGAGGAAGCAGCGGAGGCTTATGATATTGCTGCA ATAAAGTTCAGAGGATTGAATGCGGTAACTAACTTCGACATGAACAGATATGATGTTAAAAGCATACTTGAAAGCAACAC ACTACCCATTGGAGGAGCATCTAAGCGATTAAAGGAGACTCAGGACACCGAAACACTGCGTAAGAGAGAGGAAATTAAAG CTATTGGTTCGAGCTTCTACGATGGAAATTCAACGGTTGGTGGATTCCAAGGTTATCCAATGGTACCTCCGTTTGAACAA ACTTCTCAGCCATTACTAGCTTTACAAAACCAACAGAGTTATCATCATTATACCCAAGAGGCGCCACATCTTCAAAATTA CATGCAAACTCATCAGTTGCTCCATAACCCTAATAGCACTTCTTCTTTACTTCATTCAAGCCAAAGTGGGTCTCAATTTC ATCAAGGTTTTTATCAAAATCAACCTACCATGCTACACGGTTTAATGACAATGGGTTCATCTTCATCGTTGATGGGAAGT AATGGAAGTTCCAGCAATGGTTATGATGAGGCTGCATATTTTGGTAACGGGCTTGGATTGACGGCAACTTCATCGTCAAC AGGAAATGCTGGTGCTGGTATTGGATCAATGACAGATCTTGCACTCGTTAAAGTTGATTATGACATCAACTCTGGTGGCT ATGGCGGATGGCCAGCGGAAACCGTTCATGGAAATGGTGCAAACCCAGGCTCATTTACAATGTGGAATGATAATTGA |