
Microexon ID | Ps_NC_039366.1:167770755-167770763:+ |
Species | Papaver somniferum | Coordinates | NC_039366.1:167770755..167770763 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAAAGTACCTGGAATCAAAACCAAAATAAGAAGGGAAAGCAAGTTTACTTGGGTGCATATGATGATGAGGAGGCTGCAGCTAGAGCGTATGATCTTGCTGCT |
Microexon-tag Amino Acid Seq | WDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAA |
Microexon-tag spanning region | 167770538-167770964 |
Microexon-tag prediction score | 0.9732 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026562961.1x |
Reference Transcript ID | XM_026562961.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026562961.1 |
Protein ID | XP_026418746.1 |
Gene ID | LOC113314191 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.2e-13 |
Motif start | 75 |
Motif end | 133 |
Protein seq | >XP_026418746.1 MATTSSSDLGSGLKAEGGEATETVPSTATIAMANNNDQKILLYRGLKRSRKDRGCTAKERISKMPPCAAGKRSSIYRGVT RHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYSRDLDEMQNISREEY LASLRRKSSGFSRGMAKYRGLSRPCQSSRWESSLSQIGGLEQFSGSLHYGEGGTAESEYPGRFCIERKVDLTGYIKWWGP SKTCRLSKSFDETKHGSLEDIGGGEWGLQPTEPYQMPRLGLSHGPAGKKKHQEVSSALNILSQSAAYKSLQEKASKQDND ENTNNENTNTEMPFRDPVPLESTSGDGVSGGGNERHLMGGATTLGMSWLPFQRTTLSPLRTPFLSVPLMTNYSTIDPLAD PILWSSLVSHPTPGLSHTSAEEVTKTETSSSYNCFNQEEH* |
CDS seq | >XM_026562961.1 ATGGCTACTACTTCATCATCAGATCTTGGATCAGGATTGAAAGCTGAAGGAGGAGAAGCTACAGAAACAGTTCCTTCAAC AGCAACTATAGCAATGGCAAATAATAATGATCAAAAAATTCTTCTTTATAGAGGATTAAAGAGATCAAGAAAAGATAGAG GGTGTACAGCTAAAGAAAGAATTAGTAAAATGCCACCTTGTGCAGCTGGAAAAAGGAGCTCCATTTATAGAGGTGTTACT AGGCATAGATGGACTGGGCGTTATGAAGCTCACCTTTGGGATAAAAGTACCTGGAATCAAAACCAAAATAAGAAGGGAAA GCAAGTTTACTTGGGTGCATATGATGATGAGGAGGCTGCAGCTAGAGCGTATGATCTTGCTGCTCTAAAATACTGGGGTC CTGGCACACTCATTAATTTTCCAGTTAGTGACTATTCAAGAGATCTGGATGAGATGCAAAACATTTCAAGAGAGGAGTAT CTTGCATCTCTAAGAAGAAAGAGTAGTGGTTTCTCAAGAGGGATGGCTAAATACCGTGGGCTTTCTAGACCATGTCAAAG TAGTCGGTGGGAATCTTCCCTTAGTCAAATAGGAGGTCTGGAGCAATTTAGTGGAAGCTTACACTACGGCGAGGGTGGTA CTGCAGAAAGTGAATATCCAGGGAGGTTTTGCATAGAAAGAAAAGTTGACCTGACGGGTTACATCAAGTGGTGGGGGCCG AGCAAAACCTGCCGTCTAAGTAAATCTTTCGATGAAACAAAGCATGGCAGTTTGGAAGATATTGGTGGTGGTGAGTGGGG TCTCCAGCCTACAGAGCCATACCAGATGCCTCGTTTAGGGCTTTCTCATGGCCCTGCAGGAAAGAAGAAGCATCAAGAAG TTTCTTCAGCTTTGAATATTTTATCGCAGTCTGCTGCCTACAAGAGTTTGCAAGAGAAAGCCTCAAAACAAGATAATGAT GAAAATACGAACAACGAGAACACAAATACAGAGATGCCATTTCGCGATCCTGTCCCTTTGGAATCAACTAGTGGAGATGG TGTTAGTGGTGGTGGGAATGAGAGACACCTGATGGGAGGAGCAACAACACTAGGCATGAGCTGGTTGCCATTCCAAAGGA CTACTCTGTCTCCGTTGAGAACTCCTTTCCTATCAGTACCACTCATGACTAACTACAGCACTATTGATCCCTTGGCGGAT CCTATTCTTTGGTCATCACTTGTTTCTCATCCGACACCTGGACTTTCTCATACCTCAGCAGAAGAGGTTACAAAAACCGA GACCAGCTCAAGTTACAACTGCTTTAACCAGGAAGAACATTAG |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAAAGTACCTGGAATCAAAACCAAAATAAGAAGGGAAAGCAAGTTTACTTGGGTGCATATGATGATGAGGAGGCTGCAGCTAGAGCGTATGATCTTGCTGCT |
Microexon-tag Amino Acid seq | WDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAA |
Transcript ID | XM_026562961.1 |
Gene ID | Ps.58237 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.2e-13 |
Motif start | 75 |
Motif end | 133 |
Protein seq | >XM_026562961.1 MATTSSSDLGSGLKAEGGEATETVPSTATIAMANNNDQKILLYRGLKRSRKDRGCTAKERISKMPPCAAGKRSSIYRGVT RHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYSRDLDEMQNISREEY LASLRRKSSGFSRGMAKYRGLSRPCQSSRWESSLSQIGGLEQFSGSLHYGEGGTAESEYPGRFCIERKVDLTGYIKWWGP SKTCRLSKSFDETKHGSLEDIGGGEWGLQPTEPYQMPRLGLSHGPAGKKKHQEVSSALNILSQSAAYKSLQEKASKQDND ENTNNENTNTEMPFRDPVPLESTSGDGVSGGGNERHLMGGATTLGMSWLPFQRTTLSPLRTPFLSVPLMTNYSTIDPLAD PILWSSLVSHPTPGLSHTSAEEVTKTETSSSYNCFNQEEH* |
CDS seq | >XM_026562961.1 ATGGCTACTACTTCATCATCAGATCTTGGATCAGGATTGAAAGCTGAAGGAGGAGAAGCTACAGAAACAGTTCCTTCAAC AGCAACTATAGCAATGGCAAATAATAATGATCAAAAAATTCTTCTTTATAGAGGATTAAAGAGATCAAGAAAAGATAGAG GGTGTACAGCTAAAGAAAGAATTAGTAAAATGCCACCTTGTGCAGCTGGAAAAAGGAGCTCCATTTATAGAGGTGTTACT AGGCATAGATGGACTGGGCGTTATGAAGCTCACCTTTGGGATAAAAGTACCTGGAATCAAAACCAAAATAAGAAGGGAAA GCAAGTTTACTTGGGTGCATATGATGATGAGGAGGCTGCAGCTAGAGCGTATGATCTTGCTGCTCTAAAATACTGGGGTC CTGGCACACTCATTAATTTTCCAGTTAGTGACTATTCAAGAGATCTGGATGAGATGCAAAACATTTCAAGAGAGGAGTAT CTTGCATCTCTAAGAAGAAAGAGTAGTGGTTTCTCAAGAGGGATGGCTAAATACCGTGGGCTTTCTAGACCATGTCAAAG TAGTCGGTGGGAATCTTCCCTTAGTCAAATAGGAGGTCTGGAGCAATTTAGTGGAAGCTTACACTACGGCGAGGGTGGTA CTGCAGAAAGTGAATATCCAGGGAGGTTTTGCATAGAAAGAAAAGTTGACCTGACGGGTTACATCAAGTGGTGGGGGCCG AGCAAAACCTGCCGTCTAAGTAAATCTTTCGATGAAACAAAGCATGGCAGTTTGGAAGATATTGGTGGTGGTGAGTGGGG TCTCCAGCCTACAGAGCCATACCAGATGCCTCGTTTAGGGCTTTCTCATGGCCCTGCAGGAAAGAAGAAGCATCAAGAAG TTTCTTCAGCTTTGAATATTTTATCGCAGTCTGCTGCCTACAAGAGTTTGCAAGAGAAAGCCTCAAAACAAGATAATGAT GAAAATACGAACAACGAGAACACAAATACAGAGATGCCATTTCGCGATCCTGTCCCTTTGGAATCAACTAGTGGAGATGG TGTTAGTGGTGGTGGGAATGAGAGACACCTGATGGGAGGAGCAACAACACTAGGCATGAGCTGGTTGCCATTCCAAAGGA CTACTCTGTCTCCGTTGAGAACTCCTTTCCTATCAGTACCACTCATGACTAACTACAGCACTATTGATCCCTTGGCGGAT CCTATTCTTTGGTCATCACTTGTTTCTCATCCGACACCTGGACTTTCTCATACCTCAGCAGAAGAGGTTACAAAAACCGA GACCAGCTCAAGTTACAACTGCTTTAACCAGGAAGAACATTAG |