
Microexon ID | Ps_NC_039364.1:190590449-190590457:- |
Species | Papaver somniferum | Coordinates | NC_039364.1:190590449..190590457 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGTAGAAGAGAAGGCCAAAGTCGGAAAGGAAGACAAGTTTATCTTGGTGGTTATGATAAAGAGGATAAAGCAGCAAGAGCTTATGATTTAGCAGCT |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA |
Microexon-tag spanning region | 190590311-190591051 |
Microexon-tag prediction score | 0.9743 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026541933.1x |
Reference Transcript ID | XM_026541933.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026541933.1 |
Protein ID | XP_026397718.1 |
Gene ID | LOC113293234 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 2.5e-12 |
Motif start | 183 |
Motif end | 241 |
Protein seq | >XP_026397718.1 MDTSHQNWLGFSLSNAQYHEHTSSSPSVVPDHHQQQQQQFFQTLNATSFPRDENENDGSTNLSMYNFDRKLEDFLGVSST NNTHESADNNSNKNNNSTNSCTADQYGIMTYDSELKTIASCFLRGYTTDNNHYQNPSLDHHDLETTNSTGTTTAMVAAPL PVAVTSDAVSKKSVDNFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYW GPTTSTNFPVTNYEKEIEDMTNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQE EAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGITGSSSKTTKAIINSDSISDDRSNDGGHSDDRDFSSTTL SFGLPIKHDPSSTDYWSLVNGSGQNNGVTNILHQQTSPHDQRNIAGNMFFNGGFVHQLQQQEQQCVMSSSSPMSYDGSAA GYGGEWVLAQPPLVYQTGKPNLSVFQTPIYGME* |
CDS seq | >XM_026541933.1 ATGGATACTTCTCATCAGAACTGGCTAGGATTTTCTCTATCTAACGCACAGTATCATGAACATACATCATCATCACCATC AGTAGTACCAGATCATCATCAACAACAACAACAACAGTTCTTTCAAACACTGAATGCAACTTCTTTCCCTAGAGATGAAA ATGAGAATGACGGGTCAACTAATCTATCTATGTATAACTTTGATCGGAAACTTGAAGATTTTCTTGGTGTTTCTTCTACT AATAATACCCATGAATCTGCAGACAACAATAGCAACAAAAACAACAACAGCACAAACAGTTGTACTGCTGATCAGTATGG GATTATGACTTATGATTCAGAGTTGAAAACAATTGCTTCTTGTTTCTTACGTGGGTATACTACTGATAATAATCACTATC AAAACCCTAGTCTTGATCATCATGATTTGGAAACTACAAACAGTACCGGCACCACCACTGCCATGGTTGCGGCACCACTC CCCGTGGCGGTTACTTCTGACGCCGTATCGAAAAAATCTGTTGATAATTTCGGTCAAAGAACTTCGATTTACCGTGGAGT TACCAGGCATAGATGGACAGGAAGATATGAAGCTCATCTGTGGGATAATAGTTGTAGAAGAGAAGGCCAAAGTCGGAAAG GAAGACAAGTTTATCTTGGTGGTTATGATAAAGAGGATAAAGCAGCAAGAGCTTATGATTTAGCAGCTCTAAAATATTGG GGTCCAACCACAAGTACGAACTTCCCGGTTACAAATTATGAGAAAGAAATTGAAGATATGACAAATATGACCAGGCAAGA ATTTGTTGCATCCCTAAGAAGAAAAAGTAGTGGGTTTTCTAGAGGAGCTTCAATATATAGAGGAGTGACAAGACATCATC AACATGGTAGATGGCAAGCAAGAATTGGAAGAGTTGCAGGGAACAAAGATCTTTACTTGGGAACTTTCAGTACCCAGGAA GAAGCAGCAGAGGCCTACGACATAGCTGCGATAAAGTTTAGAGGCCTGAATGCTGTAACAAACTTCGATATGAGTCGATA TGACGTAAAAAGCATTGCTAATAGTAATCTACCTATAGGAGGAATTACAGGATCATCATCTAAAACAACTAAAGCTATTA TCAACTCAGACTCAATCTCAGATGATCGAAGTAACGATGGCGGTCATTCAGACGATCGAGATTTCTCGTCAACAACACTT AGCTTTGGTTTACCAATTAAGCATGATCCATCATCAACAGATTATTGGTCTCTTGTAAATGGGTCTGGTCAAAATAATGG GGTGACAAATATACTTCATCAACAAACAAGTCCTCATGATCAAAGAAATATTGCTGGTAACATGTTTTTCAATGGCGGAT TTGTTCATCAACTACAACAACAAGAACAACAGTGTGTAATGTCATCATCCTCGCCTATGTCTTATGATGGTTCTGCTGCT GGTTATGGCGGAGAGTGGGTACTTGCACAACCTCCTCTTGTTTATCAGACTGGAAAACCTAATCTGTCAGTGTTTCAGAC ACCCATTTACGGAATGGAATGA |
Microexon DNA seq | TTTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGTAGAAGAGAAGGCCAAAGTCGGAAAGGAAGACAAGTTTATCTTGGTGGTTATGATAAAGAGGATAAAGCAGCAAGAGCTTATGATTTAGCAGCT |
Microexon-tag Amino Acid seq | WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA |
Transcript ID | XM_026541933.1 |
Gene ID | Ps.45200 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 2.5e-12 |
Motif start | 183 |
Motif end | 241 |
Protein seq | >XM_026541933.1 MDTSHQNWLGFSLSNAQYHEHTSSSPSVVPDHHQQQQQQFFQTLNATSFPRDENENDGSTNLSMYNFDRKLEDFLGVSST NNTHESADNNSNKNNNSTNSCTADQYGIMTYDSELKTIASCFLRGYTTDNNHYQNPSLDHHDLETTNSTGTTTAMVAAPL PVAVTSDAVSKKSVDNFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYW GPTTSTNFPVTNYEKEIEDMTNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQE EAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGITGSSSKTTKAIINSDSISDDRSNDGGHSDDRDFSSTTL SFGLPIKHDPSSTDYWSLVNGSGQNNGVTNILHQQTSPHDQRNIAGNMFFNGGFVHQLQQQEQQCVMSSSSPMSYDGSAA GYGGEWVLAQPPLVYQTGKPNLSVFQTPIYGME* |
CDS seq | >XM_026541933.1 ATGGATACTTCTCATCAGAACTGGCTAGGATTTTCTCTATCTAACGCACAGTATCATGAACATACATCATCATCACCATC AGTAGTACCAGATCATCATCAACAACAACAACAACAGTTCTTTCAAACACTGAATGCAACTTCTTTCCCTAGAGATGAAA ATGAGAATGACGGGTCAACTAATCTATCTATGTATAACTTTGATCGGAAACTTGAAGATTTTCTTGGTGTTTCTTCTACT AATAATACCCATGAATCTGCAGACAACAATAGCAACAAAAACAACAACAGCACAAACAGTTGTACTGCTGATCAGTATGG GATTATGACTTATGATTCAGAGTTGAAAACAATTGCTTCTTGTTTCTTACGTGGGTATACTACTGATAATAATCACTATC AAAACCCTAGTCTTGATCATCATGATTTGGAAACTACAAACAGTACCGGCACCACCACTGCCATGGTTGCGGCACCACTC CCCGTGGCGGTTACTTCTGACGCCGTATCGAAAAAATCTGTTGATAATTTCGGTCAAAGAACTTCGATTTACCGTGGAGT TACCAGGCATAGATGGACAGGAAGATATGAAGCTCATCTGTGGGATAATAGTTGTAGAAGAGAAGGCCAAAGTCGGAAAG GAAGACAAGTTTATCTTGGTGGTTATGATAAAGAGGATAAAGCAGCAAGAGCTTATGATTTAGCAGCTCTAAAATATTGG GGTCCAACCACAAGTACGAACTTCCCGGTTACAAATTATGAGAAAGAAATTGAAGATATGACAAATATGACCAGGCAAGA ATTTGTTGCATCCCTAAGAAGAAAAAGTAGTGGGTTTTCTAGAGGAGCTTCAATATATAGAGGAGTGACAAGACATCATC AACATGGTAGATGGCAAGCAAGAATTGGAAGAGTTGCAGGGAACAAAGATCTTTACTTGGGAACTTTCAGTACCCAGGAA GAAGCAGCAGAGGCCTACGACATAGCTGCGATAAAGTTTAGAGGCCTGAATGCTGTAACAAACTTCGATATGAGTCGATA TGACGTAAAAAGCATTGCTAATAGTAATCTACCTATAGGAGGAATTACAGGATCATCATCTAAAACAACTAAAGCTATTA TCAACTCAGACTCAATCTCAGATGATCGAAGTAACGATGGCGGTCATTCAGACGATCGAGATTTCTCGTCAACAACACTT AGCTTTGGTTTACCAATTAAGCATGATCCATCATCAACAGATTATTGGTCTCTTGTAAATGGGTCTGGTCAAAATAATGG GGTGACAAATATACTTCATCAACAAACAAGTCCTCATGATCAAAGAAATATTGCTGGTAACATGTTTTTCAATGGCGGAT TTGTTCATCAACTACAACAACAAGAACAACAGTGTGTAATGTCATCATCCTCGCCTATGTCTTATGATGGTTCTGCTGCT GGTTATGGCGGAGAGTGGGTACTTGCACAACCTCCTCTTGTTTATCAGACTGGAAAACCTAATCTGTCAGTGTTTCAGAC ACCCATTTACGGAATGGAATGA |