
Microexon ID | Ps_NC_039364.1:102111603-102111611:+ |
Species | Papaver somniferum | Coordinates | NC_039364.1:102111603..102111611 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTTTTTAG |
Microexon Amino Acid seq | VFLG |
Microexon-tag DNA Seq | TGGGATAACAGCTACATAAGAGAAGGTCATAGACGTAAAGGCAAGCAAGTGTTTTTAGGTCAATATGACAATGAGGAGAAAGCAGCGCAGTCTTATGACCTTGTAGCT |
Microexon-tag Amino Acid Seq | WDNSYIREGHRRKGKQVFLGQYDNEEKAAQSYDLVA |
Microexon-tag spanning region | 102110168-102111772 |
Microexon-tag prediction score | 0.8998 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026546619.1x |
Reference Transcript ID | XM_026546619.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026546619.1 |
Protein ID | XP_026402404.1 |
Gene ID | LOC113297994 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.9e-10 |
Motif start | 203 |
Motif end | 262 |
Protein seq | >XP_026402404.1 MAFMNLLDERSSLDDEGHFNTNIFIKLQDSDEGCFESSFLENAQSTVPFIVVNEKPSDYMVSLVNPTVNENCDGPPSDDT ELEPHPSLADEQAPELLRIQAVGQEVYGVCRSTNTESKSLSRSENEKILEREDVSLSTNSCHEENAESQNSQSVLVSGTA MFLNLEHADDLVCSDEEKNLGEFVPPEVSTPIKSIQKVDHRTSKYHGVTRHFWTGKFEAHLWDNSYIREGHRRKGKQVFL GQYDNEEKAAQSYDLVALKYWGLHASTRLNFPISTYKKQLEEMKEMSKEEFVMYIRRNSCFKKGSSVYRGVTRHGDGRWQ ARISGIPGRRGLHLGTFSSEEEAAKAYDIASIRYRGMKAFTNFDVSNYSPLDLKESEEQLPEPKKLKKDVNLSESTIVIA KSDPRQDVRTQTV* |
CDS seq | >XM_026546619.1 ATGGCATTTATGAATCTACTAGATGAGCGTTCCAGTTTGGACGATGAGGGGCATTTTAATACCAATATATTCATTAAACT TCAAGATTCTGATGAGGGATGTTTTGAATCTTCATTCCTGGAAAATGCGCAATCAACAGTTCCTTTTATAGTAGTTAATG AGAAACCTTCAGATTATATGGTATCACTTGTAAATCCAACTGTGAACGAAAATTGTGATGGCCCACCTTCAGATGATACT GAATTAGAACCTCATCCCAGCTTGGCAGATGAACAAGCGCCAGAGCTTTTAAGAATACAGGCGGTGGGCCAGGAAGTATA CGGGGTTTGTAGATCAACTAACACTGAGTCTAAGTCTCTTTCGAGATCAGAGAATGAGAAAATCCTAGAGAGGGAAGACG TTTCTCTTAGTACCAATTCATGTCATGAGGAAAATGCTGAGTCACAGAATTCTCAGTCTGTTCTGGTTTCAGGCACCGCG ATGTTCTTGAATTTAGAACATGCTGACGACCTTGTTTGCAGTGATGAGGAAAAGAACCTTGGGGAGTTCGTTCCTCCCGA AGTTTCTACTCCAATAAAATCAATTCAGAAGGTTGACCACCGAACATCAAAATACCATGGAGTTACTAGACACTTTTGGA CTGGAAAATTTGAAGCACACCTTTGGGATAACAGCTACATAAGAGAAGGTCATAGACGTAAAGGCAAGCAAGTGTTTTTA GGTCAATATGACAATGAGGAGAAAGCAGCGCAGTCTTATGACCTTGTAGCTCTCAAATACTGGGGTCTTCATGCAAGTAC CAGATTAAATTTCCCTATTTCTACTTACAAGAAACAACTCGAAGAGATGAAGGAAATGTCAAAAGAGGAGTTTGTCATGT ACATTAGGAGGAATAGTTGCTTCAAAAAAGGATCTTCTGTTTATAGAGGCGTGACAAGACATGGAGATGGCCGGTGGCAA GCTCGAATAAGTGGAATACCTGGAAGAAGGGGACTTCACCTTGGGACATTCAGTAGTGAGGAAGAGGCTGCTAAAGCTTA CGATATCGCTTCTATCAGATATAGAGGCATGAAGGCTTTCACAAATTTTGATGTCAGTAACTATTCTCCGCTGGATTTAA AAGAATCAGAGGAACAACTACCTGAACCAAAAAAACTAAAGAAGGATGTTAATCTTAGTGAGTCTACAATTGTTATTGCT AAGTCAGATCCTCGCCAGGATGTTAGAACTCAGACAGTATGA |
Microexon DNA seq | TGTTTTTAG |
Microexon Amino Acid seq | VFLG |
Microexon-tag DNA Seq | TGGGATAACAGCTACATAAGAGAAGGTCATAGACGTAAAGGCAAGCAAGTGTTTTTAGGTCAATATGACAATGAGGAGAAAGCAGCGCAGTCTTATGACCTTGTAGCT |
Microexon-tag Amino Acid seq | WDNSYIREGHRRKGKQVFLGQYDNEEKAAQSYDLVA |
Transcript ID | XM_026546619.1 |
Gene ID | Ps.43004 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.9e-10 |
Motif start | 203 |
Motif end | 262 |
Protein seq | >XM_026546619.1 MAFMNLLDERSSLDDEGHFNTNIFIKLQDSDEGCFESSFLENAQSTVPFIVVNEKPSDYMVSLVNPTVNENCDGPPSDDT ELEPHPSLADEQAPELLRIQAVGQEVYGVCRSTNTESKSLSRSENEKILEREDVSLSTNSCHEENAESQNSQSVLVSGTA MFLNLEHADDLVCSDEEKNLGEFVPPEVSTPIKSIQKVDHRTSKYHGVTRHFWTGKFEAHLWDNSYIREGHRRKGKQVFL GQYDNEEKAAQSYDLVALKYWGLHASTRLNFPISTYKKQLEEMKEMSKEEFVMYIRRNSCFKKGSSVYRGVTRHGDGRWQ ARISGIPGRRGLHLGTFSSEEEAAKAYDIASIRYRGMKAFTNFDVSNYSPLDLKESEEQLPEPKKLKKDVNLSESTIVIA KSDPRQDVRTQTV* |
CDS seq | >XM_026546619.1 ATGGCATTTATGAATCTACTAGATGAGCGTTCCAGTTTGGACGATGAGGGGCATTTTAATACCAATATATTCATTAAACT TCAAGATTCTGATGAGGGATGTTTTGAATCTTCATTCCTGGAAAATGCGCAATCAACAGTTCCTTTTATAGTAGTTAATG AGAAACCTTCAGATTATATGGTATCACTTGTAAATCCAACTGTGAACGAAAATTGTGATGGCCCACCTTCAGATGATACT GAATTAGAACCTCATCCCAGCTTGGCAGATGAACAAGCGCCAGAGCTTTTAAGAATACAGGCGGTGGGCCAGGAAGTATA CGGGGTTTGTAGATCAACTAACACTGAGTCTAAGTCTCTTTCGAGATCAGAGAATGAGAAAATCCTAGAGAGGGAAGACG TTTCTCTTAGTACCAATTCATGTCATGAGGAAAATGCTGAGTCACAGAATTCTCAGTCTGTTCTGGTTTCAGGCACCGCG ATGTTCTTGAATTTAGAACATGCTGACGACCTTGTTTGCAGTGATGAGGAAAAGAACCTTGGGGAGTTCGTTCCTCCCGA AGTTTCTACTCCAATAAAATCAATTCAGAAGGTTGACCACCGAACATCAAAATACCATGGAGTTACTAGACACTTTTGGA CTGGAAAATTTGAAGCACACCTTTGGGATAACAGCTACATAAGAGAAGGTCATAGACGTAAAGGCAAGCAAGTGTTTTTA GGTCAATATGACAATGAGGAGAAAGCAGCGCAGTCTTATGACCTTGTAGCTCTCAAATACTGGGGTCTTCATGCAAGTAC CAGATTAAATTTCCCTATTTCTACTTACAAGAAACAACTCGAAGAGATGAAGGAAATGTCAAAAGAGGAGTTTGTCATGT ACATTAGGAGGAATAGTTGCTTCAAAAAAGGATCTTCTGTTTATAGAGGCGTGACAAGACATGGAGATGGCCGGTGGCAA GCTCGAATAAGTGGAATACCTGGAAGAAGGGGACTTCACCTTGGGACATTCAGTAGTGAGGAAGAGGCTGCTAAAGCTTA CGATATCGCTTCTATCAGATATAGAGGCATGAAGGCTTTCACAAATTTTGATGTCAGTAACTATTCTCCGCTGGATTTAA AAGAATCAGAGGAACAACTACCTGAACCAAAAAAACTAAAGAAGGATGTTAATCTTAGTGAGTCTACAATTGTTATTGCT AAGTCAGATCCTCGCCAGGATGTTAGAACTCAGACAGTATGA |