
Microexon ID | Ps_NC_039360.1:85456577-85456585:- |
Species | Papaver somniferum | Coordinates | NC_039360.1:85456577..85456585 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGCAAAAAGGAAGGACAGACTAGGAAGGGAAGGCAAGTTTATCTTGGTGGATATGATATGGAAGAAAAAGCTGCTAGAGCTTATGATTTAGCAGCA |
Microexon-tag Amino Acid Seq | WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAA |
Microexon-tag spanning region | 85456444-85456803 |
Microexon-tag prediction score | 0.9787 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026599928.1x |
Reference Transcript ID | XM_026599928.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026599928.1 |
Protein ID | XP_026455713.1 |
Gene ID | LOC113356718 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.7e-13 |
Motif start | 344 |
Motif end | 402 |
Protein seq | >XP_026455713.1 MKSMSNDSNSNNNSSSNNNNWLGFSLSPHMTMEVPSESHHTHTHNQQHHHQTSSTAAVSNNTVPTSFFLSPPHMNNSEIC YGVGTCHENSGYYSHLSVMPLKSDGSLCIMEALSRSQSEGMVPTSSPKLENFLGSGAMGNPHHYGNSERETMALSLDSMY YHQNTETQNNRQQPQQHSLNFLQQPQDHHIQVQQHTYYSGLTGHEIYQTSLEEENKGTHLSNSSLQLPPMGEDGISGLKN WVARHYPTNNSSMEQKMNTAGCLTNDGSGSGSVNAMGYGDLQSLSLSMSPGSQSSCITASQQISPTGTAECVAMETNKRG SSKMGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKY WGPSTHINFPLENYQDELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRSHRHHQHGRWQARIGRVAGNKDLYLGTF STQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVERISASNTLLAGELAKRHKDVEPVVEVVEQHSSVQNGGEGNLPEENA AGPDWKMVRNHSQQQQQQLQQQQQQQTASVENLEHKPFETNNYRNLPFSMSLHDLMGIDAMNSNQQGLEDSNRSSAHLSN TSSLVTSLSSSREGSPEKNGLFGGQSSTSNKFSPSSANSWIPSAQLKPTAITMAHLPMFAAWTDA* |
CDS seq | >XM_026599928.1 ATGAAGTCCATGAGTAATGATAGCAACAGCAACAACAACAGCAGCAGCAACAACAACAACTGGTTGGGTTTTTCACTTTC ACCTCACATGACCATGGAAGTTCCTTCAGAATCTCATCATACCCATACTCATAATCAACAACACCATCATCAAACTTCTT CTACTGCTGCAGTTTCAAATAACACTGTTCCAACAAGCTTCTTTCTCTCTCCACCTCATATGAATAACTCTGAAATCTGT TATGGAGTAGGAACTTGTCATGAAAACAGTGGATATTATTCTCATTTGAGTGTAATGCCACTAAAGTCTGATGGGTCTCT TTGTATCATGGAAGCTCTCAGTAGATCACAATCAGAAGGAATGGTGCCAACTTCATCCCCAAAACTGGAAAATTTCTTAG GAAGTGGAGCAATGGGGAATCCTCATCACTATGGAAACAGTGAAAGAGAAACCATGGCTCTTAGTTTAGACAGCATGTAT TACCACCAAAACACTGAAACTCAAAATAATAGACAACAACCACAACAGCATTCTCTTAACTTTCTTCAACAACCACAAGA TCATCATATTCAAGTCCAACAACACACATATTACTCTGGATTAACTGGTCATGAGATTTATCAAACTTCATTAGAAGAAG AAAACAAAGGAACACATCTTTCAAATTCTAGTCTTCAACTTCCTCCAATGGGAGAAGATGGTATTTCAGGTTTGAAAAAC TGGGTAGCTAGACACTATCCTACTAATAACTCATCCATGGAACAAAAAATGAATACTGCTGGTTGTTTAACTAATGATGG AAGTGGGTCTGGTTCTGTTAATGCAATGGGTTATGGAGATTTACAGTCTCTGAGCTTGTCAATGAGTCCTGGTTCACAAT CAAGCTGTATTACAGCATCGCAACAGATCTCACCAACTGGTACTGCTGAATGTGTAGCCATGGAAACAAACAAGAGAGGG TCTTCAAAAATGGGTCAGAAACAACCTGTCCATAGGAAGTCCATTGACACATTTGGGCAGAGAACTTCACAATACAGAGG TGTCACAAGGCATAGGTGGACTGGAAGATATGAAGCTCATCTATGGGATAATAGTTGCAAAAAGGAAGGACAGACTAGGA AGGGAAGGCAAGTTTATCTTGGTGGATATGATATGGAAGAAAAAGCTGCTAGAGCTTATGATTTAGCAGCACTGAAGTAT TGGGGACCTTCAACCCACATCAACTTTCCGTTGGAAAATTATCAAGATGAGCTTGAAGAAATGAAGAACATGAGTAGGCA AGAATATGTTGCCCACTTGAGAAGGAAAAGCAGTGGGTTTTCAAGAGGAGCTTCAATGTACAGAGGAGTAACAAGGTCTC ACAGACATCATCAGCATGGTAGATGGCAGGCAAGGATCGGACGAGTCGCCGGAAACAAAGACCTTTATCTTGGCACATTC AGTACCCAAGAAGAAGCAGCTGAAGCTTATGACATTGCTGCAATCAAATTTCGTGGTGTAAATGCTGTTACTAACTTTGA CATAACAAGATACGACGTTGAACGCATCTCAGCCAGTAATACCTTACTTGCCGGAGAACTTGCCAAGAGGCACAAGGATG TAGAACCTGTTGTCGAAGTTGTCGAGCAACATTCCTCTGTTCAAAATGGAGGAGAAGGTAACTTGCCCGAGGAAAATGCT GCTGGGCCTGACTGGAAGATGGTTCGTAATCATTCGCAACAACAACAACAGCAGCTGCAACAGCAACAACAGCAGCAGAC TGCATCAGTTGAAAACCTTGAGCACAAACCATTTGAGACAAACAATTACCGGAACCTCCCATTTTCGATGTCATTACATG ATCTAATGGGTATTGATGCAATGAACTCAAACCAACAAGGATTAGAAGATTCTAACAGGTCGAGTGCTCATTTATCGAAC ACGTCATCATTGGTTACAAGCTTAAGCAGCTCCAGAGAAGGTAGCCCTGAGAAAAATGGGCTCTTTGGAGGACAATCATC AACCTCCAACAAGTTTAGTCCTTCCTCGGCAAACTCCTGGATTCCATCAGCACAACTTAAGCCTACTGCAATCACTATGG CTCACTTGCCTATGTTTGCTGCATGGACTGATGCTTAG |
Microexon DNA seq | TTTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGCAAAAAGGAAGGACAGACTAGGAAGGGAAGGCAAGTTTATCTTGGTGGATATGATATGGAAGAAAAAGCTGCTAGAGCTTATGATTTAGCAGCA |
Microexon-tag Amino Acid seq | WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAA |
Transcript ID | XM_026599929.1 |
Gene ID | Ps.18120 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.6e-13 |
Motif start | 344 |
Motif end | 402 |
Protein seq | >XM_026599929.1 MKSMSNDSNSNNNSSSNNNNWLGFSLSPHMTMEVPSESHHTHTHNQQHHHQTSSTAAVSNNTVPTSFFLSPPHMNNSEIC YGVGTCHENSGYYSHLSVMPLKSDGSLCIMEALSRSQSEGMVPTSSPKLENFLGSGAMGNPHHYGNSERETMALSLDSMY YHQNTETQNNRQQPQQHSLNFLQQPQDHHIQVQQHTYYSGLTGHEIYQTSLEEENKGTHLSNSSLQLPPMGEDGISGLKN WVARHYPTNNSSMEQKMNTAGCLTNDGSGSGSVNAMGYGDLQSLSLSMSPGSQSSCITASQQISPTGTAECVAMETNKRG SSKMGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKY WGPSTHINFPLENYQDELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQ EEAAEAYDIAAIKFRGVNAVTNFDITRYDVERISASNTLLAGELAKRHKDVEPVVEVVEQHSSVQNGGEGNLPEENAAGP DWKMVRNHSQQQQQQLQQQQQQQTASVENLEHKPFETNNYRNLPFSMSLHDLMGIDAMNSNQQGLEDSNRSSAHLSNTSS LVTSLSSSREGSPEKNGLFGGQSSTSNKFSPSSANSWIPSAQLKPTAITMAHLPMFAAWTDA* |
CDS seq | >XM_026599929.1 ATGAAGTCCATGAGTAATGATAGCAACAGCAACAACAACAGCAGCAGCAACAACAACAACTGGTTGGGTTTTTCACTTTC ACCTCACATGACCATGGAAGTTCCTTCAGAATCTCATCATACCCATACTCATAATCAACAACACCATCATCAAACTTCTT CTACTGCTGCAGTTTCAAATAACACTGTTCCAACAAGCTTCTTTCTCTCTCCACCTCATATGAATAACTCTGAAATCTGT TATGGAGTAGGAACTTGTCATGAAAACAGTGGATATTATTCTCATTTGAGTGTAATGCCACTAAAGTCTGATGGGTCTCT TTGTATCATGGAAGCTCTCAGTAGATCACAATCAGAAGGAATGGTGCCAACTTCATCCCCAAAACTGGAAAATTTCTTAG GAAGTGGAGCAATGGGGAATCCTCATCACTATGGAAACAGTGAAAGAGAAACCATGGCTCTTAGTTTAGACAGCATGTAT TACCACCAAAACACTGAAACTCAAAATAATAGACAACAACCACAACAGCATTCTCTTAACTTTCTTCAACAACCACAAGA TCATCATATTCAAGTCCAACAACACACATATTACTCTGGATTAACTGGTCATGAGATTTATCAAACTTCATTAGAAGAAG AAAACAAAGGAACACATCTTTCAAATTCTAGTCTTCAACTTCCTCCAATGGGAGAAGATGGTATTTCAGGTTTGAAAAAC TGGGTAGCTAGACACTATCCTACTAATAACTCATCCATGGAACAAAAAATGAATACTGCTGGTTGTTTAACTAATGATGG AAGTGGGTCTGGTTCTGTTAATGCAATGGGTTATGGAGATTTACAGTCTCTGAGCTTGTCAATGAGTCCTGGTTCACAAT CAAGCTGTATTACAGCATCGCAACAGATCTCACCAACTGGTACTGCTGAATGTGTAGCCATGGAAACAAACAAGAGAGGG TCTTCAAAAATGGGTCAGAAACAACCTGTCCATAGGAAGTCCATTGACACATTTGGGCAGAGAACTTCACAATACAGAGG TGTCACAAGGCATAGGTGGACTGGAAGATATGAAGCTCATCTATGGGATAATAGTTGCAAAAAGGAAGGACAGACTAGGA AGGGAAGGCAAGTTTATCTTGGTGGATATGATATGGAAGAAAAAGCTGCTAGAGCTTATGATTTAGCAGCACTGAAGTAT TGGGGACCTTCAACCCACATCAACTTTCCGTTGGAAAATTATCAAGATGAGCTTGAAGAAATGAAGAACATGAGTAGGCA AGAATATGTTGCCCACTTGAGAAGGAAAAGCAGTGGGTTTTCAAGAGGAGCTTCAATGTACAGAGGAGTAACAAGACATC ATCAGCATGGTAGATGGCAGGCAAGGATCGGACGAGTCGCCGGAAACAAAGACCTTTATCTTGGCACATTCAGTACCCAA GAAGAAGCAGCTGAAGCTTATGACATTGCTGCAATCAAATTTCGTGGTGTAAATGCTGTTACTAACTTTGACATAACAAG ATACGACGTTGAACGCATCTCAGCCAGTAATACCTTACTTGCCGGAGAACTTGCCAAGAGGCACAAGGATGTAGAACCTG TTGTCGAAGTTGTCGAGCAACATTCCTCTGTTCAAAATGGAGGAGAAGGTAACTTGCCCGAGGAAAATGCTGCTGGGCCT GACTGGAAGATGGTTCGTAATCATTCGCAACAACAACAACAGCAGCTGCAACAGCAACAACAGCAGCAGACTGCATCAGT TGAAAACCTTGAGCACAAACCATTTGAGACAAACAATTACCGGAACCTCCCATTTTCGATGTCATTACATGATCTAATGG GTATTGATGCAATGAACTCAAACCAACAAGGATTAGAAGATTCTAACAGGTCGAGTGCTCATTTATCGAACACGTCATCA TTGGTTACAAGCTTAAGCAGCTCCAGAGAAGGTAGCCCTGAGAAAAATGGGCTCTTTGGAGGACAATCATCAACCTCCAA CAAGTTTAGTCCTTCCTCGGCAAACTCCTGGATTCCATCAGCACAACTTAAGCCTACTGCAATCACTATGGCTCACTTGC CTATGTTTGCTGCATGGACTGATGCTTAG |