
Microexon ID | Ps_NC_039360.1:41171399-41171407:+ |
Species | Papaver somniferum | Coordinates | NC_039360.1:41171399..41171407 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAGAATTCTTGGAATGAATCTCAGAATAAGAAAGGAAGACAAGTCTATCTTGGTGCTTATGATGGTGAAGAGGCAGCTGCACATGCATATGACTTAGCTGCA |
Microexon-tag Amino Acid Seq | WDKNSWNESQNKKGRQVYLGAYDGEEAAAHAYDLAA |
Microexon-tag spanning region | 41171185-41171632 |
Microexon-tag prediction score | 0.9634 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026604512.1x |
Reference Transcript ID | XM_026604512.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026604512.1 |
Protein ID | XP_026460297.1 |
Gene ID | LOC113361180 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 7.5e-13 |
Motif start | 51 |
Motif end | 109 |
Protein seq | >XP_026460297.1 MAKLSQQIKNNNSTTSNNTSTAVTVTTTAATKVKRKRKSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNSWNESQNK KGRQVYLGAYDGEEAAAHAYDLAALKYWGRETILNFPLATYEEEIKEMEGQSKEEYIGSLRRRSSGFSRGVSKYRGVARH HHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNNNNSSDTNTDTKPVVVHP STQDELMNSSTQQHSPSEVAAVYQPRQNGASSAKSSSALGLLLQSSKFKEMLERTSSEESTEECPLTPAESDPPKCSFPD DIQTFFECQDSGSYVEGEDNIFGDLNSSSFSPIFDCELGA* |
CDS seq | >XM_026604512.1 ATGGCAAAACTTTCACAGCAAATCAAGAACAACAATTCTACTACTAGTAACAACACTAGTACTGCTGTTACTGTTACTAC TACTGCAGCAACAAAAGTGAAAAGAAAAAGAAAAAGTGTTCCAAGAGATTCTCCTCCTCAAAGAAGTTCCATCTATCGTG GTGTTACTAGGCATAGATGGACTGGTAGATATGAAGCACATCTCTGGGACAAGAATTCTTGGAATGAATCTCAGAATAAG AAAGGAAGACAAGTCTATCTTGGTGCTTATGATGGTGAAGAGGCAGCTGCACATGCATATGACTTAGCTGCATTGAAGTA TTGGGGAAGAGAAACCATCCTTAATTTCCCTCTGGCAACATATGAAGAAGAGATAAAAGAAATGGAGGGGCAATCCAAAG AAGAATATATTGGATCCTTAAGAAGGAGAAGCAGTGGATTTTCTAGAGGAGTCTCCAAGTACAGAGGTGTTGCAAGGCAT CATCATAATGGGAGATGGGAAGCTCGAATTGGGAGAGTATTTGGCAACAAATACCTTTACCTTGGAACATATGCAACCCA AGAGGAAGCAGCTACTGCATATGACATGGCAGCAATAGAATACCGTGGACTAAATGCTGTTACAAACTTTGATCTTAGCC GCTACATCAAATGGTTAAGACCCAACAACAACAATTCTTCAGACACTAACACAGATACTAAACCAGTAGTAGTTCATCCT AGTACTCAAGATGAGTTGATGAACTCATCCACCCAACAACACAGCCCAAGTGAAGTTGCTGCAGTTTATCAGCCTCGGCA GAATGGTGCAAGTTCAGCTAAGTCATCATCGGCACTGGGACTATTACTTCAGTCGTCGAAGTTTAAGGAAATGCTTGAGA GGACTTCATCGGAGGAGTCGACAGAAGAATGTCCATTGACTCCAGCGGAATCTGACCCACCCAAATGCAGTTTCCCTGAT GATATCCAAACTTTCTTTGAGTGTCAAGATTCCGGCAGTTATGTTGAGGGTGAAGATAACATTTTTGGTGATCTCAATTC TTCTTCGTTTTCGCCAATATTTGATTGCGAGTTGGGTGCATAA |
Microexon DNA seq | TCTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAGAATTCTTGGAATGAATCTCAGAATAAGAAAGGAAGACAAGTCTATCTTGGTGCTTATGATGGTGAAGAGGCAGCTGCACATGCATATGACTTAGCTGCA |
Microexon-tag Amino Acid seq | WDKNSWNESQNKKGRQVYLGAYDGEEAAAHAYDLAA |
Transcript ID | XM_026604512.1 |
Gene ID | Ps.16813 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 7.6e-13 |
Motif start | 51 |
Motif end | 109 |
Protein seq | >XM_026604512.1 MAKLSQQIKNNNSTTSNNTSTAVTVTTTAATKVKRKRKSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNSWNESQNK KGRQVYLGAYDGEEAAAHAYDLAALKYWGRETILNFPLATYEEEIKEMEGQSKEEYIGSLRRRSSGFSRGVSKYRGVARH HHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNNNNSSDTNTDTKPVVVHP STQDELMNSSTQQHSPSEVAAVYQPRQNGASSAKSSSALGLLLQSSKFKEMLERTSSEESTEECPLTPAESDPPKCSFPD DIQTFFECQDSGSYVEGEDNIFGDLNSSSFSPIFDCELGA* |
CDS seq | >XM_026604512.1 ATGGCAAAACTTTCACAGCAAATCAAGAACAACAATTCTACTACTAGTAACAACACTAGTACTGCTGTTACTGTTACTAC TACTGCAGCAACAAAAGTGAAAAGAAAAAGAAAAAGTGTTCCAAGAGATTCTCCTCCTCAAAGAAGTTCCATCTATCGTG GTGTTACTAGGCATAGATGGACTGGTAGATATGAAGCACATCTCTGGGACAAGAATTCTTGGAATGAATCTCAGAATAAG AAAGGAAGACAAGTCTATCTTGGTGCTTATGATGGTGAAGAGGCAGCTGCACATGCATATGACTTAGCTGCATTGAAGTA TTGGGGAAGAGAAACCATCCTTAATTTCCCTCTGGCAACATATGAAGAAGAGATAAAAGAAATGGAGGGGCAATCCAAAG AAGAATATATTGGATCCTTAAGAAGGAGAAGCAGTGGATTTTCTAGAGGAGTCTCCAAGTACAGAGGTGTTGCAAGGCAT CATCATAATGGGAGATGGGAAGCTCGAATTGGGAGAGTATTTGGCAACAAATACCTTTACCTTGGAACATATGCAACCCA AGAGGAAGCAGCTACTGCATATGACATGGCAGCAATAGAATACCGTGGACTAAATGCTGTTACAAACTTTGATCTTAGCC GCTACATCAAATGGTTAAGACCCAACAACAACAATTCTTCAGACACTAACACAGATACTAAACCAGTAGTAGTTCATCCT AGTACTCAAGATGAGTTGATGAACTCATCCACCCAACAACACAGCCCAAGTGAAGTTGCTGCAGTTTATCAGCCTCGGCA GAATGGTGCAAGTTCAGCTAAGTCATCATCGGCACTGGGACTATTACTTCAGTCGTCGAAGTTTAAGGAAATGCTTGAGA GGACTTCATCGGAGGAGTCGACAGAAGAATGTCCATTGACTCCAGCGGAATCTGACCCACCCAAATGCAGTTTCCCTGAT GATATCCAAACTTTCTTTGAGTGTCAAGATTCCGGCAGTTATGTTGAGGGTGAAGATAACATTTTTGGTGATCTCAATTC TTCTTCGTTTTCGCCAATATTTGATTGCGAGTTGGGTGCATAA |