
Microexon ID | Ps_NC_039359.1:53674527-53674535:- |
Species | Papaver somniferum | Coordinates | NC_039359.1:53674527..53674535 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ps_NC_039359.1:53674527-53674535:- does not have available information here.
Transcript ID | XM_026596951.1 |
Protein ID | XP_026452736.1 |
Gene ID | LOC113353301 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.1e-10 |
Motif start | 111 |
Motif end | 168 |
Protein seq | >XP_026452736.1 MEAGDSKSRRKISPRLLDLNSEWAVEEERRLFGGIEERKLELKLGPPNEEEKGFSNGSNRKNIVKSPSSNTLNSTVNKTP ISLLFTSTLTSTTTTNNTFHYNYKKKQKISQYRGVTRDVRKGIHKAQIWDGSCRKEGIRKGKQVYLGKYDEEDAAAKAYD LAALKYFGPTARINFPLANYETEIKEMEC* |
CDS seq | >XM_026596951.1 ATGGAGGCTGGAGATTCGAAAAGTCGCCGAAAAATTAGCCCACGGCTGCTGGATTTGAATTCAGAATGGGCGGTAGAAGA AGAAAGAAGATTGTTTGGTGGTATAGAGGAAAGAAAACTGGAACTAAAACTCGGACCACCTAATGAAGAAGAGAAAGGGT TTTCTAATGGAAGCAATAGAAAGAATATAGTTAAATCTCCTTCTTCTAATACCCTTAATAGTACTGTAAACAAAACACCT ATTTCGCTTCTATTTACTTCAACTTTGACTAGCACTACTACTACGAATAATACTTTCCACTACAACTATAAAAAGAAGCA AAAAATTTCTCAATACCGTGGTGTTACTAGAGATGTGCGGAAAGGAATACATAAAGCGCAAATCTGGGATGGAAGTTGTA GAAAAGAAGGTATAAGAAAAGGAAAACAAGTTTATCTTGGTAAATATGATGAGGAAGATGCAGCAGCCAAGGCTTATGAT TTAGCTGCATTGAAGTATTTTGGCCCTACTGCTCGTATAAATTTCCCTTTAGCTAATTATGAGACAGAAATTAAAGAAAT GGAGTGTTGA |
Microexon DNA seq | TTTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | ATCTGGGATGGAAGTTGTAGAAAAGAAGGTATAAGAAAAGGAAAACAAGTTTATCTTGGTAAATATGATGAGGAAGATGCAGCAGCCAAGGCTTATGATTTAGCTGCA |
Microexon-tag Amino Acid seq | IWDGSCRKEGIRKGKQVYLGKYDEEDAAAKAYDLAA |
Transcript ID | Ps.10011.1 |
Gene ID | Ps.10011 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.1e-10 |
Motif start | 111 |
Motif end | 168 |
Protein seq | >Ps.10011.1 MEAGDSKSRRKISPRLLDLNSEWAVEEERRLFGGIEERKLELKLGPPNEEEKGFSNGSNRKNIVKSPSSNTLNSTVNKTP ISLLFTSTLTSTTTTNNTFHYNYKKKQKISQYRGVTRDVRKGIHKAQIWDGSCRKEGIRKGKQVYLGKYDEEDAAAKAYD LAALKYFGPTARINFPLANYETEIKEMEC* |
CDS seq | >Ps.10011.1 ATGGAGGCTGGAGATTCGAAAAGTCGCCGAAAAATTAGCCCACGGCTGCTGGATTTGAATTCAGAATGGGCGGTAGAAGA AGAAAGAAGATTGTTTGGTGGTATAGAGGAAAGAAAACTGGAACTAAAACTCGGACCACCTAATGAAGAAGAGAAAGGGT TTTCTAATGGAAGCAATAGAAAGAATATAGTTAAATCTCCTTCTTCTAATACCCTTAATAGTACTGTAAACAAAACACCT ATTTCGCTTCTATTTACTTCAACTTTGACTAGCACTACTACTACGAATAATACTTTCCACTACAACTATAAAAAGAAGCA AAAAATTTCTCAATACCGTGGTGTTACTAGAGATGTGCGGAAAGGAATACATAAAGCGCAAATCTGGGATGGAAGTTGTA GAAAAGAAGGTATAAGAAAAGGAAAACAAGTTTATCTTGGTAAATATGATGAGGAAGATGCAGCAGCCAAGGCTTATGAT TTAGCTGCATTGAAGTATTTTGGCCCTACTGCTCGTATAAATTTCCCTTTAGCTAATTATGAGACAGAAATTAAAGAAAT GGAGTGTTGA |