
Microexon ID | Ps_NC_039359.1:210635773-210635781:- |
Species | Papaver somniferum | Coordinates | NC_039359.1:210635773..210635781 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATGGAAGTTATAGAAAAGAAGGCAGCATAAGAAAAGGAAGACAAGTTTATCTTGGTGTATATGATGAGGAAGATACAGCAGCCAAGGCTTATGATTTAGCTGCA |
Microexon-tag Amino Acid Seq | WDGSYRKEGSIRKGRQVYLGVYDEEDTAAKAYDLAA |
Microexon-tag spanning region | 210635588-210638623 |
Microexon-tag prediction score | 0.916 |
Overlapped with the annotated transcript (%) | 12.34 |
New Transcript ID | XM_026596510.1x |
Reference Transcript ID | XM_026596510.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026596510.1 |
Protein ID | XP_026452295.1 |
Gene ID | LOC113352723 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 2.5e-09 |
Motif start | 91 |
Motif end | 148 |
Protein seq | >XP_026452295.1 MKCGDSTSRGEISPQLLDLNSEWVVEGDSGGSDERRIFGGSEERKLELKLGPPCEVNKIPISLLFTSTLTSTTTTNNTSH FNYTKRQKISQYRGVTRDIRKAKYKAQFWDGSCRKEGIRKGKQVYLGVYDEEDTAAKAYDLAALKYLGPTARINFPLSNY QKEIIEMENMKKEEYVATLKRKSTGFSRGVSMYKGVRRCGKRWQAVIKSAANKRSYLGTFGTQQEAAEVYDIAAIKSRGA SAVTNFPTSNYDVEHICSNATLIGGDITKHPSPQNSSSSIAAIENESVVVTN* |
CDS seq | >XM_026596510.1 ATGAAGTGCGGAGATTCCACAAGCCGAGGAGAAATTAGTCCACAGCTGCTGGACTTGAATTCAGAATGGGTAGTAGAAGG AGATAGTGGTGGTAGTGATGAAAGAAGAATTTTTGGTGGTTCAGAGGAAAGAAAACTGGAACTAAAACTTGGGCCACCTT GTGAAGTAAACAAAATACCTATTTCACTTCTATTTACTTCAACTTTGACTAGTACTACTACTACAAATAATACTTCCCAC TTCAACTATACAAAGAGGCAAAAAATTTCTCAATACCGTGGTGTTACTAGAGATATACGGAAAGCAAAATATAAAGCGCA ATTCTGGGATGGAAGTTGTAGAAAAGAAGGTATAAGAAAAGGAAAACAAGTTTATCTTGGTGTATATGATGAGGAAGATA CAGCAGCCAAGGCTTATGATTTAGCTGCATTGAAGTATCTTGGCCCTACTGCTCGTATAAATTTCCCTTTATCTAACTAT CAGAAAGAAATTATAGAAATGGAGAACATGAAGAAAGAAGAATATGTTGCCACTTTAAAAAGAAAAAGTACTGGCTTTTC AAGGGGTGTATCAATGTACAAAGGAGTGAGAAGGTGTGGTAAAAGATGGCAAGCTGTAATCAAGAGTGCGGCAAACAAGC GCTCATATCTTGGAACTTTCGGTACACAACAGGAAGCAGCCGAGGTATATGACATTGCAGCAATAAAATCCAGAGGTGCA AGTGCAGTGACCAATTTTCCAACTAGTAACTATGATGTTGAACATATATGTTCAAACGCGACTCTAATTGGTGGTGATAT TACAAAACATCCATCGCCTCAGAACTCTTCGTCATCTATTGCTGCCATCGAAAATGAGTCAGTCGTGGTAACTAATTAG |
Ps_NC_039359.1:210635773-210635781:- does not have available information here.