Microexon ID Ps_NC_039359.1:210635773-210635781:-
Species Papaver somniferum
Coordinates NC_039359.1:210635773..210635781
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATCTTG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATGGAAGTTATAGAAAAGAAGGCAGCATAAGAAAAGGAAGACAAGTTTATCTTGGTGTATATGATGAGGAAGATACAGCAGCCAAGGCTTATGATTTAGCTGCA
Microexon-tag Amino Acid Seq WDGSYRKEGSIRKGRQVYLGVYDEEDTAAKAYDLAA
Microexon-tag spanning region210635588-210638623
Microexon-tag prediction score0.916
Overlapped with the annotated transcript (%) 12.34
New Transcript ID XM_026596510.1x
Reference Transcript ID XM_026596510.1
Gene ID NA
Gene Name NA
Transcript ID XM_026596510.1
Protein ID XP_026452295.1
Gene ID LOC113352723
Gene Name NA
Pfam domain motif AP2
Motif E-value 2.5e-09
Motif start 91
Motif end 148
Protein seq >XP_026452295.1
MKCGDSTSRGEISPQLLDLNSEWVVEGDSGGSDERRIFGGSEERKLELKLGPPCEVNKIPISLLFTSTLTSTTTTNNTSH
FNYTKRQKISQYRGVTRDIRKAKYKAQFWDGSCRKEGIRKGKQVYLGVYDEEDTAAKAYDLAALKYLGPTARINFPLSNY
QKEIIEMENMKKEEYVATLKRKSTGFSRGVSMYKGVRRCGKRWQAVIKSAANKRSYLGTFGTQQEAAEVYDIAAIKSRGA
SAVTNFPTSNYDVEHICSNATLIGGDITKHPSPQNSSSSIAAIENESVVVTN*
CDS seq >XM_026596510.1
ATGAAGTGCGGAGATTCCACAAGCCGAGGAGAAATTAGTCCACAGCTGCTGGACTTGAATTCAGAATGGGTAGTAGAAGG
AGATAGTGGTGGTAGTGATGAAAGAAGAATTTTTGGTGGTTCAGAGGAAAGAAAACTGGAACTAAAACTTGGGCCACCTT
GTGAAGTAAACAAAATACCTATTTCACTTCTATTTACTTCAACTTTGACTAGTACTACTACTACAAATAATACTTCCCAC
TTCAACTATACAAAGAGGCAAAAAATTTCTCAATACCGTGGTGTTACTAGAGATATACGGAAAGCAAAATATAAAGCGCA
ATTCTGGGATGGAAGTTGTAGAAAAGAAGGTATAAGAAAAGGAAAACAAGTTTATCTTGGTGTATATGATGAGGAAGATA
CAGCAGCCAAGGCTTATGATTTAGCTGCATTGAAGTATCTTGGCCCTACTGCTCGTATAAATTTCCCTTTATCTAACTAT
CAGAAAGAAATTATAGAAATGGAGAACATGAAGAAAGAAGAATATGTTGCCACTTTAAAAAGAAAAAGTACTGGCTTTTC
AAGGGGTGTATCAATGTACAAAGGAGTGAGAAGGTGTGGTAAAAGATGGCAAGCTGTAATCAAGAGTGCGGCAAACAAGC
GCTCATATCTTGGAACTTTCGGTACACAACAGGAAGCAGCCGAGGTATATGACATTGCAGCAATAAAATCCAGAGGTGCA
AGTGCAGTGACCAATTTTCCAACTAGTAACTATGATGTTGAACATATATGTTCAAACGCGACTCTAATTGGTGGTGATAT
TACAAAACATCCATCGCCTCAGAACTCTTCGTCATCTATTGCTGCCATCGAAAATGAGTCAGTCGTGGTAACTAATTAG
Ps_NC_039359.1:210635773-210635781:- does not have available information here.