
Microexon ID | Pp_23:8897688-8897696:- |
Species | Physcomitrium patens | Coordinates | 23:8897688..8897696 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAGAATTGTTGGAATGATAAACAAAAGAAGAAAGGACGACAAGTTTATTTAGGAGCATACGATGAAGAAGAGGCGGCTGCCAGGGCTTACGACCTTGCTGCG |
Microexon-tag Amino Acid Seq | WDKNCWNDKQKKKGRQVYLGAYDEEEAAARAYDLAA |
Microexon-tag spanning region | 8897443-8897923 |
Microexon-tag prediction score | 0.9582 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c23_13360V3.1x |
Reference Transcript ID | Pp3c23_13360V3.1 |
Gene ID | Pp3c23_13360 |
Gene Name | NA |
Transcript ID | Pp3c23_13360V3.1 |
Protein ID | Pp3c23_13360V3.1 |
Gene ID | Pp3c23_13360 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 2e-13 |
Motif start | 59 |
Motif end | 117 |
Protein seq | >Pp3c23_13360V3.1 MEPRQRSLMLSSLVVAEDKVCKRTVRQYPARSKSKRKSFAERELAGADACGGPLKRSSSFRGVTRHRWTGRFEAHLWDKN CWNDKQKKKGRQVYLGAYDEEEAAARAYDLAALKYWGQSTVINFKLEDYQQQLEEMRNITREEYLATLRRKSSGFSRGVS KYRGVARHHHNGRWEARIGRVDGNKYLYLGTFGTQEEAARAYDRAAIEYRGPAAVTNFDLTCYTQQLARKPVQSKLAFEE GQGASSVSVGGSCTNDQMYPPIPLEQSCDMQLLPTLDGDDSQLVDRKSIIFDSGSCRDLSQLLQSPFSPGSDAGGSCIKS LTKLRYACDGGSSNNLQSLAYEDPAQITESRCSSQYQYTDDSMEQDVIFNANPYLTNDFSHQEYQIVDEKPKICLEDITY VVNECIPGDKIPEMETSGSSVVTTMMIPRESNYLKSFEIDFDDDSHTECESQIESQVDNNSFWDEFLGSNDPLLQETSFP DVFDEQQTFRCPSSDSDLTLTFDM* |
CDS seq | >Pp3c23_13360V3.1 ATGGAGCCGCGGCAGCGAAGCCTGATGCTCAGTAGTTTGGTTGTCGCGGAGGACAAGGTTTGTAAGAGGACTGTGAGGCA GTACCCTGCGAGGAGTAAAAGCAAGCGGAAGTCGTTTGCGGAGCGAGAGCTCGCGGGAGCTGATGCATGCGGTGGCCCTT TGAAGAGAAGCTCGTCGTTTAGAGGAGTGACCAGGCACCGATGGACAGGAAGATTTGAGGCACACCTCTGGGACAAGAAT TGTTGGAATGATAAACAAAAGAAGAAAGGACGACAAGTTTATTTAGGAGCATACGATGAAGAAGAGGCGGCTGCCAGGGC TTACGACCTTGCTGCGCTCAAATACTGGGGACAGAGTACTGTTATTAACTTCAAGTTGGAAGATTATCAACAACAGCTTG AGGAGATGAGGAACATTACCCGTGAGGAGTACCTTGCCACTCTTCGAAGAAAAAGCAGCGGCTTCTCGCGGGGAGTTTCC AAATATCGAGGTGTTGCTAGGCATCATCACAACGGACGCTGGGAAGCTCGCATTGGTCGTGTTGATGGCAACAAGTACTT GTATCTCGGCACTTTCGGTACACAAGAAGAAGCCGCTCGAGCGTATGACAGGGCTGCCATTGAGTACCGTGGGCCAGCAG CTGTTACCAACTTCGATCTCACGTGTTACACCCAGCAATTGGCGCGAAAGCCCGTGCAATCGAAGTTGGCATTCGAGGAG GGTCAAGGCGCAAGCTCAGTCTCAGTAGGCGGCTCGTGCACTAACGATCAGATGTATCCACCAATCCCCTTAGAACAATC ATGCGACATGCAGTTGCTGCCGACTCTTGATGGAGATGATTCCCAGCTGGTGGACAGGAAGAGCATCATCTTTGACAGTG GCTCTTGCAGGGACCTCTCCCAGCTCCTTCAATCACCCTTCAGTCCAGGCTCGGACGCAGGGGGCTCGTGCATCAAGTCA TTGACGAAACTACGGTACGCTTGCGATGGTGGCTCAAGCAACAACCTCCAGAGCCTCGCGTACGAGGATCCTGCTCAGAT CACAGAGTCTCGTTGTTCGTCTCAGTACCAATACACAGACGATAGCATGGAGCAGGACGTGATCTTCAACGCCAATCCTT ATCTTACAAATGACTTTTCCCATCAAGAATATCAGATTGTAGACGAGAAGCCCAAAATATGTCTAGAAGACATCACCTAT GTCGTCAACGAATGCATTCCTGGGGACAAGATCCCGGAGATGGAGACGAGCGGCTCTAGCGTTGTGACCACCATGATGAT TCCGAGGGAATCCAACTACTTGAAGAGCTTTGAGATTGACTTCGACGACGACTCTCACACGGAATGTGAGAGTCAGATAG AGAGTCAAGTGGATAATAATTCTTTCTGGGATGAATTTCTGGGGTCGAACGACCCTCTATTGCAGGAGACCTCCTTCCCC GACGTATTCGACGAGCAGCAGACGTTCAGGTGTCCTTCTTCTGACAGCGACTTAACTTTAACGTTTGACATGTAG |
Microexon DNA seq | TTTATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAGAATTGTTGGAATGATAAACAAAAGAAGAAAGGACGACAAGTTTATTTAGGAGCATACGATGAAGAAGAGGCGGCTGCCAGGGCTTACGACCTTGCTGCG |
Microexon-tag Amino Acid seq | WDKNCWNDKQKKKGRQVYLGAYDEEEAAARAYDLAA |
Transcript ID | Pp3c23_13360V3.1 |
Gene ID | Pp.15148 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 2e-13 |
Motif start | 59 |
Motif end | 117 |
Protein seq | >Pp3c23_13360V3.1 MEPRQRSLMLSSLVVAEDKVCKRTVRQYPARSKSKRKSFAERELAGADACGGPLKRSSSFRGVTRHRWTGRFEAHLWDKN CWNDKQKKKGRQVYLGAYDEEEAAARAYDLAALKYWGQSTVINFKLEDYQQQLEEMRNITREEYLATLRRKSSGFSRGVS KYRGVARHHHNGRWEARIGRVDGNKYLYLGTFGTQEEAARAYDRAAIEYRGPAAVTNFDLTCYTQQLARKPVQSKLAFEE GQGASSVSVGGSCTNDQMYPPIPLEQSCDMQLLPTLDGDDSQLVDRKSIIFDSGSCRDLSQLLQSPFSPGSDAGGSCIKS LTKLRYACDGGSSNNLQSLAYEDPAQITESRCSSQYQYTDDSMEQDVIFNANPYLTNDFSHQEYQIVDEKPKICLEDITY VVNECIPGDKIPEMETSGSSVVTTMMIPRESNYLKSFEIDFDDDSHTECESQIESQVDNNSFWDEFLGSNDPLLQETSFP DVFDEQQTFRCPSSDSDLTLTFDM* |
CDS seq | >Pp3c23_13360V3.1 ATGGAGCCGCGGCAGCGAAGCCTGATGCTCAGTAGTTTGGTTGTCGCGGAGGACAAGGTTTGTAAGAGGACTGTGAGGCA GTACCCTGCGAGGAGTAAAAGCAAGCGGAAGTCGTTTGCGGAGCGAGAGCTCGCGGGAGCTGATGCATGCGGTGGCCCTT TGAAGAGAAGCTCGTCGTTTAGAGGAGTGACCAGGCACCGATGGACAGGAAGATTTGAGGCACACCTCTGGGACAAGAAT TGTTGGAATGATAAACAAAAGAAGAAAGGACGACAAGTTTATTTAGGAGCATACGATGAAGAAGAGGCGGCTGCCAGGGC TTACGACCTTGCTGCGCTCAAATACTGGGGACAGAGTACTGTTATTAACTTCAAGTTGGAAGATTATCAACAACAGCTTG AGGAGATGAGGAACATTACCCGTGAGGAGTACCTTGCCACTCTTCGAAGAAAAAGCAGCGGCTTCTCGCGGGGAGTTTCC AAATATCGAGGTGTTGCTAGGCATCATCACAACGGACGCTGGGAAGCTCGCATTGGTCGTGTTGATGGCAACAAGTACTT GTATCTCGGCACTTTCGGTACACAAGAAGAAGCCGCTCGAGCGTATGACAGGGCTGCCATTGAGTACCGTGGGCCAGCAG CTGTTACCAACTTCGATCTCACGTGTTACACCCAGCAATTGGCGCGAAAGCCCGTGCAATCGAAGTTGGCATTCGAGGAG GGTCAAGGCGCAAGCTCAGTCTCAGTAGGCGGCTCGTGCACTAACGATCAGATGTATCCACCAATCCCCTTAGAACAATC ATGCGACATGCAGTTGCTGCCGACTCTTGATGGAGATGATTCCCAGCTGGTGGACAGGAAGAGCATCATCTTTGACAGTG GCTCTTGCAGGGACCTCTCCCAGCTCCTTCAATCACCCTTCAGTCCAGGCTCGGACGCAGGGGGCTCGTGCATCAAGTCA TTGACGAAACTACGGTACGCTTGCGATGGTGGCTCAAGCAACAACCTCCAGAGCCTCGCGTACGAGGATCCTGCTCAGAT CACAGAGTCTCGTTGTTCGTCTCAGTACCAATACACAGACGATAGCATGGAGCAGGACGTGATCTTCAACGCCAATCCTT ATCTTACAAATGACTTTTCCCATCAAGAATATCAGATTGTAGACGAGAAGCCCAAAATATGTCTAGAAGACATCACCTAT GTCGTCAACGAATGCATTCCTGGGGACAAGATCCCGGAGATGGAGACGAGCGGCTCTAGCGTTGTGACCACCATGATGAT TCCGAGGGAATCCAACTACTTGAAGAGCTTTGAGATTGACTTCGACGACGACTCTCACACGGAATGTGAGAGTCAGATAG AGAGTCAAGTGGATAATAATTCTTTCTGGGATGAATTTCTGGGGTCGAACGACCCTCTATTGCAGGAGACCTCCTTCCCC GACGTATTCGACGAGCAGCAGACGTTCAGGTGTCCTTCTTCTGACAGCGACTTAACTTTAACGTTTGACATGTAG |