
Microexon ID | Os_9:15365340-15365348:+ |
Species | Oryza sativa | Coordinates | 9:15365340..15365348 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACCTCG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAGAACAGCTGGAACGAGTCCCAGAACAAGAAGGGCAAGCAAGTTTACCTCGGGGCGTATGACGACGAGGAGGCAGCGGCGAGGGCGTACGATCTGGCGGCA |
Microexon-tag Amino Acid Seq | WDKNSWNESQNKKGKQVYLGAYDDEEAAARAYDLAA |
Microexon-tag spanning region | 15365208-15365552 |
Microexon-tag prediction score | 0.961 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os09t0423800-01x |
Reference Transcript ID | Os09t0423800-01 |
Gene ID | Os09g0423800 |
Gene Name | AP2/EREBP#153 |
Transcript ID | Os09t0423800-01 |
Protein ID | Os09t0423800-01 |
Gene ID | Os09g0423800 |
Gene Name | AP2/EREBP#153 |
Pfam domain motif | AP2 |
Motif E-value | 6.1e-14 |
Motif start | 32 |
Motif end | 91 |
Protein seq | >Os09t0423800-01 SSGVAAAAAAAAVKPKRTRKSVPRESPSQRSSVYRGVTRHRWTGRFEAHLWDKNSWNESQNKKGKQVYLGAYDDEEAAAR AYDLAALKYWGPDTILNFPLSAYEGELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKY LYLGTYATQEEAAMAYDMAAIEYRGLNAVTNFDLSRYIKWLRPGADGAGAPQNPHPMLGALSAQDLPAIDLDAMASSFQH DGHGAAAAAAQLIPARHSLGHTPTTSALSLLLQSPKFKEMIERTSAAETTTTSSTTTSSSSPSPPQATKDDGASPQCSFP EDIQTYFGCAAEDGAAGAGYADVDGLFFGDLAAYASPAFHFELDL* |
CDS seq | >Os09t0423800-01 AGCAGCGGTGTCGCCGCCGCCGCCGCCGCGGCGGCGGTGAAGCCGAAGCGCACGCGGAAGAGCGTCCCCCGCGAGTCCCC CTCCCAGCGCAGCTCCGTCTACCGCGGCGTCACCCGGCACCGGTGGACGGGGCGGTTCGAGGCGCACCTGTGGGACAAGA ACAGCTGGAACGAGTCCCAGAACAAGAAGGGCAAGCAAGTTTACCTCGGGGCGTATGACGACGAGGAGGCAGCGGCGAGG GCGTACGATCTGGCGGCATTGAAGTACTGGGGACCCGACACCATCCTCAACTTCCCGTTGTCTGCATATGAAGGTGAGTT GAAAGAAATGGAGGGGCAATCAAGGGAAGAGTATATTGGATCCCTAAGGAGGAAAAGCAGTGGGTTCTCAAGAGGAGTAT CGAAGTACCGAGGCGTTGCAAGACACCATCACAATGGGAGATGGGAGGCCCGGATTGGCCGTGTTTTTGGCAACAAGTAC CTCTATCTCGGTACTTACGCGACGCAGGAGGAGGCGGCAATGGCGTACGACATGGCGGCCATCGAGTATCGGGGCCTGAA CGCCGTCACCAACTTCGACCTCAGCCGGTACATCAAGTGGCTCCGGCCCGGCGCCGACGGCGCGGGCGCTCCCCAGAATC CTCACCCCATGCTGGGTGCTCTGTCGGCGCAGGATCTCCCGGCGATCGACCTCGACGCCATGGCGTCGTCGTTCCAGCAC GACGGCCATGGCGCCGCGGCGGCGGCGGCACAGCTGATCCCGGCAAGACATTCGCTCGGCCACACGCCGACAACGTCGGC GCTCAGCCTGCTGCTGCAGTCGCCCAAGTTCAAGGAGATGATCGAGCGGACGTCGGCGGCGGAGACCACCACCACCAGCA GCACAACCACCTCCTCCTCGTCCCCGTCGCCGCCGCAGGCGACCAAGGACGACGGCGCCTCGCCGCAGTGCAGCTTCCCG GAGGACATCCAGACCTACTTCGGCTGCGCCGCCGAGGACGGCGCCGCCGGCGCGGGATACGCCGACGTGGACGGCCTGTT CTTCGGCGACCTCGCCGCGTACGCGTCGCCGGCGTTCCACTTCGAGCTGGACTTGTGA |
Microexon DNA seq | TTTACCTCG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAGAACAGCTGGAACGAGTCCCAGAACAAGAAGGGCAAGCAAGTTTACCTCGGGGCGTATGACGACGAGGAGGCAGCGGCGAGGGCGTACGATCTGGCGGCA |
Microexon-tag Amino Acid seq | WDKNSWNESQNKKGKQVYLGAYDDEEAAARAYDLAA |
Transcript ID | Os.37615.1 |
Gene ID | Os.37615 |
Gene Name | AP2/EREBP#153 |
Pfam domain motif | AP2 |
Motif E-value | 6.5e-14 |
Motif start | 46 |
Motif end | 105 |
Protein seq | >Os.37615.1 MAKPRKNSTTTNTSSSGVAAAAAAAAVKPKRTRKSVPRESPSQRSSVYRGVTRHRWTGRFEAHLWDKNSWNESQNKKGKQ VYLGAYDDEEAAARAYDLAALKYWGPDTILNFPLSAYEGELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNG RWEARIGRVFGNKYLYLGTYATQEEAAMAYDMAAIEYRGLNAVTNFDLSRYIKWLRPGADGAGAPQNPHPMLGALSAQDL PAIDLDAMASSFQHDGHGAAAAAAQLIPARHSLGHTPTTSALSLLLQSPKFKEMIERTSAAETTTTSSTTTSSSSPSPPQ ATKDDGASPQCSFPEDIQTYFGCAAEDGAAGAGYADVDGLFFGDLAAYASPAFHFELDL* |
CDS seq | >Os.37615.1 ATGGCGAAGCCTCGCAAGAACTCCACCACTACCAACACCAGCAGCAGCGGTGTCGCCGCCGCCGCCGCCGCGGCGGCGGT GAAGCCGAAGCGCACGCGGAAGAGCGTCCCCCGCGAGTCCCCCTCCCAGCGCAGCTCCGTCTACCGCGGCGTCACCCGGC ACCGGTGGACGGGGCGGTTCGAGGCGCACCTGTGGGACAAGAACAGCTGGAACGAGTCCCAGAACAAGAAGGGCAAGCAA GTTTACCTCGGGGCGTATGACGACGAGGAGGCAGCGGCGAGGGCGTACGATCTGGCGGCATTGAAGTACTGGGGACCCGA CACCATCCTCAACTTCCCGTTGTCTGCATATGAAGGTGAGTTGAAAGAAATGGAGGGGCAATCAAGGGAAGAGTATATTG GATCCCTAAGGAGGAAAAGCAGTGGGTTCTCAAGAGGAGTATCGAAGTACCGAGGCGTTGCAAGACACCATCACAATGGG AGATGGGAGGCCCGGATTGGCCGTGTTTTTGGCAACAAGTACCTCTATCTCGGTACTTACGCGACGCAGGAGGAGGCGGC AATGGCGTACGACATGGCGGCCATCGAGTATCGGGGCCTGAACGCCGTCACCAACTTCGACCTCAGCCGGTACATCAAGT GGCTCCGGCCCGGCGCCGACGGCGCGGGCGCTCCCCAGAATCCTCACCCCATGCTGGGTGCTCTGTCGGCGCAGGATCTC CCGGCGATCGACCTCGACGCCATGGCGTCGTCGTTCCAGCACGACGGCCATGGCGCCGCGGCGGCGGCGGCACAGCTGAT CCCGGCAAGACATTCGCTCGGCCACACGCCGACAACGTCGGCGCTCAGCCTGCTGCTGCAGTCGCCCAAGTTCAAGGAGA TGATCGAGCGGACGTCGGCGGCGGAGACCACCACCACCAGCAGCACAACCACCTCCTCCTCGTCCCCGTCGCCGCCGCAG GCGACCAAGGACGACGGCGCCTCGCCGCAGTGCAGCTTCCCGGAGGACATCCAGACCTACTTCGGCTGCGCCGCCGAGGA CGGCGCCGCCGGCGCGGGATACGCCGACGTGGACGGCCTGTTCTTCGGCGACCTCGCCGCGTACGCGTCGCCGGCGTTCC ACTTCGAGCTGGACTTGTGA |