
Microexon ID | Os_8:21564858-21564866:+ |
Species | Oryza sativa | Coordinates | 8:21564858..21564866 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACCTCG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAGAACACCTGGAACGAGTCGCAGAGCAAGAAGGGCAGACAAGTTTACCTCGGGGCTTACGACGGCGAGGAAGCGGCGGCGCGCGCCTACGACCTCGCCGCA |
Microexon-tag Amino Acid Seq | WDKNTWNESQSKKGRQVYLGAYDGEEAAARAYDLAA |
Microexon-tag spanning region | 21564666-21565012 |
Microexon-tag prediction score | 0.9453 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os08t0442400-01x |
Reference Transcript ID | Os08t0442400-01 |
Gene ID | Os08g0442400 |
Gene Name | AP2/EREBP#109 |
Transcript ID | Os08t0442400-01 |
Protein ID | Os08t0442400-01 |
Gene ID | Os08g0442400 |
Gene Name | AP2/EREBP#109 |
Pfam domain motif | AP2 |
Motif E-value | 3.8e-13 |
Motif start | 55 |
Motif end | 114 |
Protein seq | >Os08t0442400-01 MAKRRSNGETAAASSDDSSSGVCGGGGGGEVEPRRRQKRPRRSAPRDCPSQRSSAFRGVTRHRWTGRFEAHLWDKNTWNE SQSKKGRQVYLGAYDGEEAAARAYDLAALKYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRG VARHHHNGKWEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLYIRWYHGSCRSSSAAAATTIED DDFAEAIAAALQGVDEQPSSSPATTRQLQTADDDDDDLVAQLPPQLRPLARAASTSPIGLLLRSPKFKEIIEQAAAAAAS SSGSSSSSSTDSPSSSSSSSLSPSPLPSPPPQQQPTVPKDDQYNVDMSSVAAARCSFPDDVQTYFGLDDDGFGYPEVDTF LFGDLGAYAAPMFQFELDV* |
CDS seq | >Os08t0442400-01 ATGGCCAAGCGACGCAGCAACGGCGAGACCGCCGCCGCGAGCAGCGACGACTCTAGCTCCGGCGTCTGCGGCGGCGGCGG CGGCGGTGAGGTTGAGCCGAGGCGGCGGCAGAAGCGGCCGCGGAGGAGCGCCCCGCGGGATTGCCCCTCCCAGCGCAGCT CCGCGTTCCGCGGCGTCACACGGCACCGGTGGACGGGGCGGTTCGAGGCGCATCTCTGGGACAAGAACACCTGGAACGAG TCGCAGAGCAAGAAGGGCAGACAAGTTTACCTCGGGGCTTACGACGGCGAGGAAGCGGCGGCGCGCGCCTACGACCTCGC CGCATTGAAGTACTGGGGCCACGACACCGTCCTCAACTTCCCTCTGTCAACATATGACGAGGAATTGAAGGAAATGGAGG GGCAGTCCAGGGAAGAGTACATCGGATCGCTCCGGAGGAAGAGCAGTGGCTTCTCAAGAGGGGTGTCCAAGTACAGAGGA GTTGCAAGGCATCATCACAACGGCAAATGGGAGGCTCGGATTGGGCGTGTGTTCGGCAACAAATACCTCTACCTAGGTAC TTATGCAACACAAGAGGAGGCGGCCGTGGCGTACGACATCGCGGCGATCGAGCACCGCGGCCTCAACGCCGTCACCAACT TCGACATCAATCTCTACATCAGGTGGTACCACGGCTCTTGCCGCTCCAGCAGCGCCGCCGCCGCCACCACCATCGAAGAC GATGATTTCGCCGAAGCCATCGCCGCCGCGTTGCAAGGCGTCGACGAGCAGCCGTCGTCGTCGCCGGCGACGACGCGCCA GCTGCAAACCGCGGACGACGACGACGACGACCTCGTGGCGCAGCTCCCGCCCCAGCTGAGGCCGCTGGCTCGCGCGGCGT CCACCTCCCCGATCGGACTGCTGCTGCGGTCGCCCAAGTTCAAGGAGATCATCGAGCAGGCGGCGGCCGCGGCGGCGTCG TCCTCTGGTAGCAGCAGTAGCAGCAGCACAGACTCACCTTCTTCTTCGTCGTCGTCATCGCTGTCGCCGTCGCCATTGCC ATCGCCGCCGCCGCAGCAGCAGCCAACCGTACCGAAGGACGACCAGTACAACGTCGACATGTCGTCGGTGGCGGCGGCGA GGTGCAGCTTCCCGGACGACGTGCAGACGTACTTCGGGCTGGACGACGACGGCTTCGGGTACCCGGAGGTGGACACGTTC TTGTTCGGGGATTTGGGCGCGTACGCGGCGCCCATGTTTCAGTTCGAGCTCGACGTCTGA |
Microexon DNA seq | TTTACCTCG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAGAACACCTGGAACGAGTCGCAGAGCAAGAAGGGCAGACAAGTTTACCTCGGGGCTTACGACGGCGAGGAAGCGGCGGCGCGCGCCTACGACCTCGCCGCA |
Microexon-tag Amino Acid seq | WDKNTWNESQSKKGRQVYLGAYDGEEAAARAYDLAA |
Transcript ID | Os08t0442400-01 |
Gene ID | Os.35689 |
Gene Name | AP2/EREBP#109 |
Pfam domain motif | AP2 |
Motif E-value | 3.8e-13 |
Motif start | 55 |
Motif end | 114 |
Protein seq | >Os08t0442400-01 MAKRRSNGETAAASSDDSSSGVCGGGGGGEVEPRRRQKRPRRSAPRDCPSQRSSAFRGVTRHRWTGRFEAHLWDKNTWNE SQSKKGRQVYLGAYDGEEAAARAYDLAALKYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRG VARHHHNGKWEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLYIRWYHGSCRSSSAAAATTIED DDFAEAIAAALQGVDEQPSSSPATTRQLQTADDDDDDLVAQLPPQLRPLARAASTSPIGLLLRSPKFKEIIEQAAAAAAS SSGSSSSSSTDSPSSSSSSSLSPSPLPSPPPQQQPTVPKDDQYNVDMSSVAAARCSFPDDVQTYFGLDDDGFGYPEVDTF LFGDLGAYAAPMFQFELDV* |
CDS seq | >Os08t0442400-01 ATGGCCAAGCGACGCAGCAACGGCGAGACCGCCGCCGCGAGCAGCGACGACTCTAGCTCCGGCGTCTGCGGCGGCGGCGG CGGCGGTGAGGTTGAGCCGAGGCGGCGGCAGAAGCGGCCGCGGAGGAGCGCCCCGCGGGATTGCCCCTCCCAGCGCAGCT CCGCGTTCCGCGGCGTCACACGGCACCGGTGGACGGGGCGGTTCGAGGCGCATCTCTGGGACAAGAACACCTGGAACGAG TCGCAGAGCAAGAAGGGCAGACAAGTTTACCTCGGGGCTTACGACGGCGAGGAAGCGGCGGCGCGCGCCTACGACCTCGC CGCATTGAAGTACTGGGGCCACGACACCGTCCTCAACTTCCCTCTGTCAACATATGACGAGGAATTGAAGGAAATGGAGG GGCAGTCCAGGGAAGAGTACATCGGATCGCTCCGGAGGAAGAGCAGTGGCTTCTCAAGAGGGGTGTCCAAGTACAGAGGA GTTGCAAGGCATCATCACAACGGCAAATGGGAGGCTCGGATTGGGCGTGTGTTCGGCAACAAATACCTCTACCTAGGTAC TTATGCAACACAAGAGGAGGCGGCCGTGGCGTACGACATCGCGGCGATCGAGCACCGCGGCCTCAACGCCGTCACCAACT TCGACATCAATCTCTACATCAGGTGGTACCACGGCTCTTGCCGCTCCAGCAGCGCCGCCGCCGCCACCACCATCGAAGAC GATGATTTCGCCGAAGCCATCGCCGCCGCGTTGCAAGGCGTCGACGAGCAGCCGTCGTCGTCGCCGGCGACGACGCGCCA GCTGCAAACCGCGGACGACGACGACGACGACCTCGTGGCGCAGCTCCCGCCCCAGCTGAGGCCGCTGGCTCGCGCGGCGT CCACCTCCCCGATCGGACTGCTGCTGCGGTCGCCCAAGTTCAAGGAGATCATCGAGCAGGCGGCGGCCGCGGCGGCGTCG TCCTCTGGTAGCAGCAGTAGCAGCAGCACAGACTCACCTTCTTCTTCGTCGTCGTCATCGCTGTCGCCGTCGCCATTGCC ATCGCCGCCGCCGCAGCAGCAGCCAACCGTACCGAAGGACGACCAGTACAACGTCGACATGTCGTCGGTGGCGGCGGCGA GGTGCAGCTTCCCGGACGACGTGCAGACGTACTTCGGGCTGGACGACGACGGCTTCGGGTACCCGGAGGTGGACACGTTC TTGTTCGGGGATTTGGGCGCGTACGCGGCGCCCATGTTTCAGTTCGAGCTCGACGTCTGA |