
Microexon ID | Os_7:1299781-1299789:+ |
Species | Oryza sativa | Coordinates | 7:1299781..1299789 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTCG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGGAAAGGGAGGCAAGTTTATCTCGGTGGGTATGACATGGAGGAGAAAGCGGCGAGAGCGTATGACCTGGCGGCG |
Microexon-tag Amino Acid Seq | WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAA |
Microexon-tag spanning region | 1299582-1299950 |
Microexon-tag prediction score | 0.972 |
Overlapped with the annotated transcript (%) | 85.19 |
New Transcript ID | Os07t0124700-01x |
Reference Transcript ID | Os07t0124700-01 |
Gene ID | Os07g0124700 |
Gene Name | OsPLT8 |
Transcript ID | Os07t0124700-01 |
Protein ID | Os07t0124700-01 |
Gene ID | Os07g0124700 |
Gene Name | OsPLT8 |
Pfam domain motif | AP2 |
Motif E-value | 2.8e-06 |
Motif start | 3 |
Motif end | 35 |
Protein seq | >Os07t0124700-01 KEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMTRQEYVAHLRRKSSGFSRGASMY RGVTRHHQHGRWQARIGRVSGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDITRYDVDKIMASNTLLPADLARR NAATTTSKDDHSAAGAGAIVSVHSAADIAVADTLWKATTAPRQQQQHHDDVVLSGADQAAFSVLHDLVAVDAAAAHQQQQ QQQHMSMSAASSLVTSLSNSREGSPDRGGGLSMLFAKPSPAVAASAQQQASTKLMAAPLPLGSWVSSPPASARPPAVSIA HMPLFAAWTDA* |
CDS seq | >Os07t0124700-01 AAGGAAGGCCAGACCAGGAAAGGGAGGCAAGTTTATCTCGGTGGGTATGACATGGAGGAGAAAGCGGCGAGAGCGTATGA CCTGGCGGCGCTCAAGTATTGGGGCCCTTCCACACACATCAACTTCCCGCTGGAGGACTACCAGGAGGAGCTGGAGGAGA TGAAGAACATGACAAGGCAGGAGTATGTGGCTCACTTAAGGAGGAAAAGTAGCGGTTTCTCACGGGGAGCTTCCATGTAC CGTGGTGTCACAAGGCATCATCAGCACGGACGGTGGCAGGCACGCATCGGCCGAGTCTCCGGCAACAAGGACCTCTACCT CGGCACTTTCAGCACGCAGGAGGAGGCGGCGGAGGCGTACGACGTGGCGGCGATCAAGTTCCGGGGGCTCAACGCCGTCA CCAACTTCGACATCACCCGCTACGACGTCGACAAGATCATGGCCAGCAACACCCTCCTCCCCGCCGACCTCGCCCGCCGC AACGCCGCCACCACCACCTCCAAGGACGACCACTCCGCCGCCGGCGCCGGCGCCATTGTCTCGGTGCACTCCGCCGCCGA CATCGCCGTCGCCGACACCCTCTGGAAGGCCACCACTGCCCCGAGGCAGCAGCAGCAGCACCACGACGACGTCGTGCTGT CCGGCGCCGACCAGGCCGCATTCTCCGTCCTCCACGACCTCGTCGCCGTCGACGCCGCGGCGGCGCACCAGCAGCAGCAG CAGCAGCAGCACATGTCCATGTCGGCGGCGTCGTCGCTGGTGACGAGCCTGAGCAACTCGCGCGAGGGGAGCCCCGACCG CGGCGGCGGCCTCTCCATGCTCTTCGCCAAGCCGTCGCCCGCCGTGGCGGCGTCGGCGCAGCAGCAGGCGTCGACCAAGC TCATGGCGGCGCCGCTGCCGCTCGGCTCCTGGGTCTCCTCGCCGCCGGCGTCTGCCAGGCCGCCCGCCGTCTCCATCGCC CACATGCCCCTCTTCGCCGCCTGGACCGACGCCTAA |
Os_7:1299781-1299789:+ does not have available information here.