Microexon ID Os_7:1299781-1299789:+
Species Oryza sativa
Coordinates 7:1299781..1299789
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATCTCG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGGAAAGGGAGGCAAGTTTATCTCGGTGGGTATGACATGGAGGAGAAAGCGGCGAGAGCGTATGACCTGGCGGCG
Microexon-tag Amino Acid Seq WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAA
Microexon-tag spanning region1299582-1299950
Microexon-tag prediction score0.972
Overlapped with the annotated transcript (%) 85.19
New Transcript ID Os07t0124700-01x
Reference Transcript ID Os07t0124700-01
Gene ID Os07g0124700
Gene Name OsPLT8
Transcript ID Os07t0124700-01
Protein ID Os07t0124700-01
Gene ID Os07g0124700
Gene Name OsPLT8
Pfam domain motif AP2
Motif E-value 2.8e-06
Motif start 3
Motif end 35
Protein seq >Os07t0124700-01
KEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMTRQEYVAHLRRKSSGFSRGASMY
RGVTRHHQHGRWQARIGRVSGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDITRYDVDKIMASNTLLPADLARR
NAATTTSKDDHSAAGAGAIVSVHSAADIAVADTLWKATTAPRQQQQHHDDVVLSGADQAAFSVLHDLVAVDAAAAHQQQQ
QQQHMSMSAASSLVTSLSNSREGSPDRGGGLSMLFAKPSPAVAASAQQQASTKLMAAPLPLGSWVSSPPASARPPAVSIA
HMPLFAAWTDA*
CDS seq >Os07t0124700-01
AAGGAAGGCCAGACCAGGAAAGGGAGGCAAGTTTATCTCGGTGGGTATGACATGGAGGAGAAAGCGGCGAGAGCGTATGA
CCTGGCGGCGCTCAAGTATTGGGGCCCTTCCACACACATCAACTTCCCGCTGGAGGACTACCAGGAGGAGCTGGAGGAGA
TGAAGAACATGACAAGGCAGGAGTATGTGGCTCACTTAAGGAGGAAAAGTAGCGGTTTCTCACGGGGAGCTTCCATGTAC
CGTGGTGTCACAAGGCATCATCAGCACGGACGGTGGCAGGCACGCATCGGCCGAGTCTCCGGCAACAAGGACCTCTACCT
CGGCACTTTCAGCACGCAGGAGGAGGCGGCGGAGGCGTACGACGTGGCGGCGATCAAGTTCCGGGGGCTCAACGCCGTCA
CCAACTTCGACATCACCCGCTACGACGTCGACAAGATCATGGCCAGCAACACCCTCCTCCCCGCCGACCTCGCCCGCCGC
AACGCCGCCACCACCACCTCCAAGGACGACCACTCCGCCGCCGGCGCCGGCGCCATTGTCTCGGTGCACTCCGCCGCCGA
CATCGCCGTCGCCGACACCCTCTGGAAGGCCACCACTGCCCCGAGGCAGCAGCAGCAGCACCACGACGACGTCGTGCTGT
CCGGCGCCGACCAGGCCGCATTCTCCGTCCTCCACGACCTCGTCGCCGTCGACGCCGCGGCGGCGCACCAGCAGCAGCAG
CAGCAGCAGCACATGTCCATGTCGGCGGCGTCGTCGCTGGTGACGAGCCTGAGCAACTCGCGCGAGGGGAGCCCCGACCG
CGGCGGCGGCCTCTCCATGCTCTTCGCCAAGCCGTCGCCCGCCGTGGCGGCGTCGGCGCAGCAGCAGGCGTCGACCAAGC
TCATGGCGGCGCCGCTGCCGCTCGGCTCCTGGGTCTCCTCGCCGCCGGCGTCTGCCAGGCCGCCCGCCGTCTCCATCGCC
CACATGCCCCTCTTCGCCGCCTGGACCGACGCCTAA
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