
Microexon ID | Os_6:27026683-27026691:+ |
Species | Oryza sativa | Coordinates | 6:27026683..27026691 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTACTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAATAGCTGCCGCCGGGAAGGCCAAAGCCGCAAAGGCCGCCAAGTCTACTTAGGAGGTTATGATAAGGAGGAGAAGGCCGCAAGAGCTTACGACCTCGCCGCC |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 27026476-27026851 |
Microexon-tag prediction score | 0.9492 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os06t0657500-02x |
Reference Transcript ID | Os06t0657500-02 |
Gene ID | Os06g0657500 |
Gene Name | OsPLT2 |
Transcript ID | Os06t0657500-02 |
Protein ID | Os06t0657500-02 |
Gene ID | Os06g0657500 |
Gene Name | OsPLT2 |
Pfam domain motif | AP2 |
Motif E-value | 3.4e-13 |
Motif start | 130 |
Motif end | 188 |
Protein seq | >Os06t0657500-02 MDMDMSSAYPHHWLSFSLSNNYHHGLLEALSTTSAPPLGEEGPAEGAPKMEDFLGGLGGGGGAVAAAPAAAPEDQLSCGE LGSIAAGFLRRYPAPENAGGVTIAMATDAAAELADPARRTAETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRK GRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVANYETELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRHH QHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVDSILNSDLPVGGGAATRASKFPSD PSLPLPSPAMPPSEKDYWSLLALHYHHHQQQQQQQQFPASAFDTYGCSSGVNVDFTMGTSSHSGSNSNSSSSSAIWGTAA GAAMGRQQNGGSSNKQSNSYSGNNIPYAAAAAMTSGSALYGGSTGSNGTWVASNTSTAPHFYNYLFGME* |
CDS seq | >Os06t0657500-02 ATGGACATGGACATGAGCTCGGCTTATCCTCACCATTGGCTCTCCTTCTCCCTCTCTAACAACTACCACCATGGCCTCCT TGAGGCCCTCTCTACCACATCTGCACCTCCACTTGGAGAGGAGGGGCCAGCGGAGGGCGCTCCGAAGATGGAGGATTTCC TCGGCGGCCTAGGCGGAGGCGGCGGCGCCGTCGCCGCCGCTCCGGCAGCTGCCCCGGAGGATCAGCTCAGCTGCGGCGAG CTTGGTAGCATCGCCGCCGGGTTCTTGCGCCGGTACCCAGCGCCTGAGAACGCCGGCGGGGTGACCATCGCAATGGCGAC CGACGCGGCGGCGGAGCTGGCCGATCCGGCGAGGAGGACCGCCGAGACGTTCGGGCAACGGACGTCCATCTACCGTGGTG TCACTAGGCACCGGTGGACGGGGAGGTACGAGGCGCACCTGTGGGACAATAGCTGCCGCCGGGAAGGCCAAAGCCGCAAA GGCCGCCAAGTCTACTTAGGAGGTTATGATAAGGAGGAGAAGGCCGCAAGAGCTTACGACCTCGCCGCCCTAAAGTACTG GGGTCCAACCACCACGACGAACTTCCCTGTTGCCAACTACGAGACGGAGCTGGAGGAGATGAAGTCCATGACGCGGCAGG AGTTCATCGCGTCGCTGCGCAGGAAGAGCAGCGGCTTCTCAAGAGGGGCTTCCATCTACAGAGGAGTAACAAGACATCAT CAGCACGGCCGGTGGCAAGCGAGGATCGGCAGGGTGGCCGGAAACAAGGACCTGTACTTGGGCACTTTCAGCACGCAGGA GGAGGCTGCCGAGGCGTACGACATTGCCGCTATCAAGTTCAGGGGGCTCAACGCCGTCACCAACTTCGACATGAGCCGCT ACGACGTCGACAGCATCCTCAACAGCGACCTGCCGGTCGGCGGCGGAGCCGCCACGCGCGCCTCTAAGTTCCCCTCTGAC CCATCGCTGCCGCTGCCGTCGCCTGCCATGCCACCGTCGGAGAAGGACTACTGGTCCCTCCTTGCCCTGCACTACCACCA CCACCAGCAGCAGCAGCAGCAGCAGCAGTTTCCTGCTTCTGCATTTGACACCTACGGCTGCTCCTCCGGCGTGAACGTGG ACTTCACAATGGGGACTAGCAGCCACAGCGGCAGCAACAGCAACAGCAGCAGCAGCAGCGCCATATGGGGCACAGCCGCC GGCGCAGCGATGGGGAGGCAGCAAAACGGCGGCAGCAGCAACAAGCAGAGCAACAGCTACTCCGGTAACAACATTCCTTA TGCTGCTGCAGCAGCTATGACTTCTGGATCAGCACTCTACGGGGGCTCCACCGGTAGCAACGGGACATGGGTGGCGAGTA ACACGAGCACGGCTCCCCACTTCTACAACTATTTGTTTGGGATGGAGTAG |
Microexon DNA seq | TCTACTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAATAGCTGCCGCCGGGAAGGCCAAAGCCGCAAAGGCCGCCAAGTCTACTTAGGAGGTTATGATAAGGAGGAGAAGGCCGCAAGAGCTTACGACCTCGCCGCC |
Microexon-tag Amino Acid seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
Transcript ID | Os06t0657500-02 |
Gene ID | Os.30458 |
Gene Name | OsPLT2 |
Pfam domain motif | AP2 |
Motif E-value | 3.4e-13 |
Motif start | 130 |
Motif end | 188 |
Protein seq | >Os06t0657500-02 MDMDMSSAYPHHWLSFSLSNNYHHGLLEALSTTSAPPLGEEGPAEGAPKMEDFLGGLGGGGGAVAAAPAAAPEDQLSCGE LGSIAAGFLRRYPAPENAGGVTIAMATDAAAELADPARRTAETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRK GRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVANYETELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRHH QHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVDSILNSDLPVGGGAATRASKFPSD PSLPLPSPAMPPSEKDYWSLLALHYHHHQQQQQQQQFPASAFDTYGCSSGVNVDFTMGTSSHSGSNSNSSSSSAIWGTAA GAAMGRQQNGGSSNKQSNSYSGNNIPYAAAAAMTSGSALYGGSTGSNGTWVASNTSTAPHFYNYLFGME* |
CDS seq | >Os06t0657500-02 ATGGACATGGACATGAGCTCGGCTTATCCTCACCATTGGCTCTCCTTCTCCCTCTCTAACAACTACCACCATGGCCTCCT TGAGGCCCTCTCTACCACATCTGCACCTCCACTTGGAGAGGAGGGGCCAGCGGAGGGCGCTCCGAAGATGGAGGATTTCC TCGGCGGCCTAGGCGGAGGCGGCGGCGCCGTCGCCGCCGCTCCGGCAGCTGCCCCGGAGGATCAGCTCAGCTGCGGCGAG CTTGGTAGCATCGCCGCCGGGTTCTTGCGCCGGTACCCAGCGCCTGAGAACGCCGGCGGGGTGACCATCGCAATGGCGAC CGACGCGGCGGCGGAGCTGGCCGATCCGGCGAGGAGGACCGCCGAGACGTTCGGGCAACGGACGTCCATCTACCGTGGTG TCACTAGGCACCGGTGGACGGGGAGGTACGAGGCGCACCTGTGGGACAATAGCTGCCGCCGGGAAGGCCAAAGCCGCAAA GGCCGCCAAGTCTACTTAGGAGGTTATGATAAGGAGGAGAAGGCCGCAAGAGCTTACGACCTCGCCGCCCTAAAGTACTG GGGTCCAACCACCACGACGAACTTCCCTGTTGCCAACTACGAGACGGAGCTGGAGGAGATGAAGTCCATGACGCGGCAGG AGTTCATCGCGTCGCTGCGCAGGAAGAGCAGCGGCTTCTCAAGAGGGGCTTCCATCTACAGAGGAGTAACAAGACATCAT CAGCACGGCCGGTGGCAAGCGAGGATCGGCAGGGTGGCCGGAAACAAGGACCTGTACTTGGGCACTTTCAGCACGCAGGA GGAGGCTGCCGAGGCGTACGACATTGCCGCTATCAAGTTCAGGGGGCTCAACGCCGTCACCAACTTCGACATGAGCCGCT ACGACGTCGACAGCATCCTCAACAGCGACCTGCCGGTCGGCGGCGGAGCCGCCACGCGCGCCTCTAAGTTCCCCTCTGAC CCATCGCTGCCGCTGCCGTCGCCTGCCATGCCACCGTCGGAGAAGGACTACTGGTCCCTCCTTGCCCTGCACTACCACCA CCACCAGCAGCAGCAGCAGCAGCAGCAGTTTCCTGCTTCTGCATTTGACACCTACGGCTGCTCCTCCGGCGTGAACGTGG ACTTCACAATGGGGACTAGCAGCCACAGCGGCAGCAACAGCAACAGCAGCAGCAGCAGCGCCATATGGGGCACAGCCGCC GGCGCAGCGATGGGGAGGCAGCAAAACGGCGGCAGCAGCAACAAGCAGAGCAACAGCTACTCCGGTAACAACATTCCTTA TGCTGCTGCAGCAGCTATGACTTCTGGATCAGCACTCTACGGGGGCTCCACCGGTAGCAACGGGACATGGGTGGCGAGTA ACACGAGCACGGCTCCCCACTTCTACAACTATTTGTTTGGGATGGAGTAG |