
Microexon ID | Os_4:33343172-33343180:+ |
Species | Oryza sativa | Coordinates | 4:33343172..33343180 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTGGGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCG |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 33342964-33343358 |
Microexon-tag prediction score | 0.9602 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os04t0653600-01x |
Reference Transcript ID | Os04t0653600-01 |
Gene ID | Os04g0653600 |
Gene Name | OsPLT1 |
Transcript ID | Os04t0653600-01 |
Protein ID | Os04t0653600-01 |
Gene ID | Os04g0653600 |
Gene Name | OsPLT1 |
Pfam domain motif | AP2 |
Motif E-value | 3.6e-13 |
Motif start | 144 |
Motif end | 202 |
Protein seq | >Os04t0653600-01 MDMDTSHHYPWLNFSLAHHCEMEEEERGAAAELAAIAGAAPPPKLEDFLGGGCNGGSSGGACPPVQTTAPTAAELYESEL KFLAAGFQLSGAAGAAPPVPALLPAAALEQTDETKQLALPPQAAVAPPPEQKKAVDSFGQRTSIYRGVTRHRWTGRYEAH LWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPSTTTNFPVAEYEKELEEMKHMTRQEFVASLRRKSSGF SRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGLNAVTNFEIGRYNVESIISSNLPI GSMAGNRSTKAGLELAPSSSADAIAATEANHTGVAPPSTLAFTALPMKYDQADYLSYLALQHHQQGNLQGLGFGLYSSGV NLDFANANGNGAMSNCYTNVSLHEQQQQHQHQHQQEQQQDQQDDQSQSSNNSCGSIPFATPIAFSGSYESSMTAAGTFGY YPNVAAFQTPIFGME* |
CDS seq | >Os04t0653600-01 ATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGGAGGAGGAGAG GGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGAAACTGGAGGACTTCCTCGGCGGCGGCTGCA ACGGGGGATCAAGCGGTGGCGCTTGCCCGCCGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTC AAGTTTCTCGCCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCGGTGCCCGCGCTGTTGCCGGCGGCTGC TCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCAGGCCGCGGTGGCGCCGCCGCCGGAGCAGAAGAAGG CGGTGGACTCGTTCGGGCAGAGAACGTCTATCTACCGCGGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCAT CTGTGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTGGGTGGCTATGATAAGGAGGA GAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGT ACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTC TCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGC TGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGT TCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATC GGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCAC CGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATT ACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTCAGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTA AACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCA GCAACATCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAACAGGATGATCAGTCACAAAGCTCCAACAACAGCTGCG GCTCCATTCCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCTCCATGACAGCAGCAGGCACCTTTGGATAC TACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGA |
Microexon DNA seq | TGTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTGGGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCG |
Microexon-tag Amino Acid seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
Transcript ID | Os04t0653600-01 |
Gene ID | Os.24423 |
Gene Name | OsPLT1 |
Pfam domain motif | AP2 |
Motif E-value | 3.6e-13 |
Motif start | 144 |
Motif end | 202 |
Protein seq | >Os04t0653600-01 MDMDTSHHYPWLNFSLAHHCEMEEEERGAAAELAAIAGAAPPPKLEDFLGGGCNGGSSGGACPPVQTTAPTAAELYESEL KFLAAGFQLSGAAGAAPPVPALLPAAALEQTDETKQLALPPQAAVAPPPEQKKAVDSFGQRTSIYRGVTRHRWTGRYEAH LWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPSTTTNFPVAEYEKELEEMKHMTRQEFVASLRRKSSGF SRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGLNAVTNFEIGRYNVESIISSNLPI GSMAGNRSTKAGLELAPSSSADAIAATEANHTGVAPPSTLAFTALPMKYDQADYLSYLALQHHQQGNLQGLGFGLYSSGV NLDFANANGNGAMSNCYTNVSLHEQQQQHQHQHQQEQQQDQQDDQSQSSNNSCGSIPFATPIAFSGSYESSMTAAGTFGY YPNVAAFQTPIFGME* |
CDS seq | >Os04t0653600-01 ATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGGAGGAGGAGAG GGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGAAACTGGAGGACTTCCTCGGCGGCGGCTGCA ACGGGGGATCAAGCGGTGGCGCTTGCCCGCCGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTC AAGTTTCTCGCCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCGGTGCCCGCGCTGTTGCCGGCGGCTGC TCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCAGGCCGCGGTGGCGCCGCCGCCGGAGCAGAAGAAGG CGGTGGACTCGTTCGGGCAGAGAACGTCTATCTACCGCGGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCAT CTGTGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTGGGTGGCTATGATAAGGAGGA GAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGT ACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTC TCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGC TGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGT TCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATC GGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCAC CGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATT ACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTCAGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTA AACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCA GCAACATCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAACAGGATGATCAGTCACAAAGCTCCAACAACAGCTGCG GCTCCATTCCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCTCCATGACAGCAGCAGGCACCTTTGGATAC TACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGA |