Microexon ID Os_4:33343172-33343180:+
Species Oryza sativa
Coordinates 4:33343172..33343180
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTGGGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCG
Microexon-tag Amino Acid Seq WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA
Microexon-tag spanning region33342964-33343358
Microexon-tag prediction score0.9602
Overlapped with the annotated transcript (%) 100
New Transcript ID Os04t0653600-01x
Reference Transcript ID Os04t0653600-01
Gene ID Os04g0653600
Gene Name OsPLT1
Transcript ID Os04t0653600-01
Protein ID Os04t0653600-01
Gene ID Os04g0653600
Gene Name OsPLT1
Pfam domain motif AP2
Motif E-value 3.6e-13
Motif start 144
Motif end 202
Protein seq >Os04t0653600-01
MDMDTSHHYPWLNFSLAHHCEMEEEERGAAAELAAIAGAAPPPKLEDFLGGGCNGGSSGGACPPVQTTAPTAAELYESEL
KFLAAGFQLSGAAGAAPPVPALLPAAALEQTDETKQLALPPQAAVAPPPEQKKAVDSFGQRTSIYRGVTRHRWTGRYEAH
LWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPSTTTNFPVAEYEKELEEMKHMTRQEFVASLRRKSSGF
SRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGLNAVTNFEIGRYNVESIISSNLPI
GSMAGNRSTKAGLELAPSSSADAIAATEANHTGVAPPSTLAFTALPMKYDQADYLSYLALQHHQQGNLQGLGFGLYSSGV
NLDFANANGNGAMSNCYTNVSLHEQQQQHQHQHQQEQQQDQQDDQSQSSNNSCGSIPFATPIAFSGSYESSMTAAGTFGY
YPNVAAFQTPIFGME*
CDS seq >Os04t0653600-01
ATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGGAGGAGGAGAG
GGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGAAACTGGAGGACTTCCTCGGCGGCGGCTGCA
ACGGGGGATCAAGCGGTGGCGCTTGCCCGCCGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTC
AAGTTTCTCGCCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCGGTGCCCGCGCTGTTGCCGGCGGCTGC
TCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCAGGCCGCGGTGGCGCCGCCGCCGGAGCAGAAGAAGG
CGGTGGACTCGTTCGGGCAGAGAACGTCTATCTACCGCGGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCAT
CTGTGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTGGGTGGCTATGATAAGGAGGA
GAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGT
ACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTC
TCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGC
TGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGT
TCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATC
GGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCAC
CGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATT
ACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTCAGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTA
AACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCA
GCAACATCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAACAGGATGATCAGTCACAAAGCTCCAACAACAGCTGCG
GCTCCATTCCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCTCCATGACAGCAGCAGGCACCTTTGGATAC
TACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGA
Microexon DNA seq TGTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTGGGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCG
Microexon-tag Amino Acid seq WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA
Transcript ID Os04t0653600-01
Gene ID Os.24423
Gene Name OsPLT1
Pfam domain motif AP2
Motif E-value 3.6e-13
Motif start 144
Motif end 202
Protein seq >Os04t0653600-01
MDMDTSHHYPWLNFSLAHHCEMEEEERGAAAELAAIAGAAPPPKLEDFLGGGCNGGSSGGACPPVQTTAPTAAELYESEL
KFLAAGFQLSGAAGAAPPVPALLPAAALEQTDETKQLALPPQAAVAPPPEQKKAVDSFGQRTSIYRGVTRHRWTGRYEAH
LWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPSTTTNFPVAEYEKELEEMKHMTRQEFVASLRRKSSGF
SRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGLNAVTNFEIGRYNVESIISSNLPI
GSMAGNRSTKAGLELAPSSSADAIAATEANHTGVAPPSTLAFTALPMKYDQADYLSYLALQHHQQGNLQGLGFGLYSSGV
NLDFANANGNGAMSNCYTNVSLHEQQQQHQHQHQQEQQQDQQDDQSQSSNNSCGSIPFATPIAFSGSYESSMTAAGTFGY
YPNVAAFQTPIFGME*
CDS seq >Os04t0653600-01
ATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGGAGGAGGAGAG
GGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGAAACTGGAGGACTTCCTCGGCGGCGGCTGCA
ACGGGGGATCAAGCGGTGGCGCTTGCCCGCCGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTC
AAGTTTCTCGCCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCGGTGCCCGCGCTGTTGCCGGCGGCTGC
TCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCAGGCCGCGGTGGCGCCGCCGCCGGAGCAGAAGAAGG
CGGTGGACTCGTTCGGGCAGAGAACGTCTATCTACCGCGGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCAT
CTGTGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTGGGTGGCTATGATAAGGAGGA
GAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGT
ACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTC
TCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGC
TGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGT
TCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATC
GGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCAC
CGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATT
ACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTCAGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTA
AACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCA
GCAACATCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAACAGGATGATCAGTCACAAAGCTCCAACAACAGCTGCG
GCTCCATTCCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCTCCATGACAGCAGCAGGCACCTTTGGATAC
TACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGA