
Microexon ID | Os_3:6995145-6995153:- |
Species | Oryza sativa | Coordinates | 3:6995145..6995153 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TATATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGTTGCAAAAAGGATGGACAGACAAGGAAGGGAAGGCAAGTATATCTAGGTGGTTATGACACTGAAGATAAAGCTGCGAGGGCTTATGATCTGGCTGCG |
Microexon-tag Amino Acid Seq | WDNSCKKDGQTRKGRQVYLGGYDTEDKAARAYDLAA |
Microexon-tag spanning region | 6995010-6995336 |
Microexon-tag prediction score | 0.9694 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os03t0232200-01x |
Reference Transcript ID | Os03t0232200-01 |
Gene ID | Os03g0232200 |
Gene Name | OsPLT9 |
Transcript ID | Os03t0232200-01 |
Protein ID | Os03t0232200-01 |
Gene ID | Os03g0232200 |
Gene Name | OsPLT9 |
Pfam domain motif | AP2 |
Motif E-value | 2.9e-13 |
Motif start | 291 |
Motif end | 349 |
Protein seq | >Os03t0232200-01 MASGGGSSNWLGFSLSPHMPAMEVPSSSEPSTAAHHHHHHHPPAAAAAAGAMSSPPDSATTCNFLFSPPAAQMVAPSPGY YYVGGAYGDGTSTAGVYYSHLPVMPIKSDGSLCIMEGMMPSSSPKLEDFLGCGNGSGHDPATYYSQGQEAEDASRAAYQH HQLVPYNYQPLTEAEMLQEAAAAPMEDAMAAAKNFLVTSYGACYGNQEMPQPLSLSMSPGSQSSSCVSAAPQQHQQMAVV AAAAAAGDGQGSNSNDGGEQRVGKKRGTGKGGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKDGQTR KGRQVYLGGYDTEDKAARAYDLAALKYWGLSTHINFPLENYRDEIEEMERMTRQEYVAHLRRRSSGFSRGASIYRGVTRH HQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDITRYDVDKIMESSSLLPGEAARKVKAIEA APDHVPIGRELGATEEASAATVTGTDWRMVLHGSQQQQAAACTEATADLQKGFMGDAHSALHGIVGFDVESAAADEIDVP GGKISGINFSNSSSLVTSLSNSREGSPERLGLAMLYAKHHPTAVSLAAMNPWMPMPAPAAAHVMRPPSAIAHLPVFAAWT DA* |
CDS seq | >Os03t0232200-01 ATGGCCAGCGGCGGCGGCAGCAGCAACTGGTTAGGCTTCTCGCTCTCCCCGCACATGCCGGCCATGGAGGTGCCGTCCTC CTCTGAGCCATCGACTGCTGCTCATCATCATCATCATCATCATCCACCTGCTGCTGCTGCTGCTGCCGGAGCCATGTCGT CTCCTCCCGACAGCGCCACGACCTGCAACTTCCTCTTCTCCCCTCCTGCAGCACAGATGGTCGCTCCTTCACCTGGCTAC TACTACGTCGGCGGCGCCTACGGAGACGGGACCAGCACCGCCGGCGTCTACTACTCGCACCTCCCTGTCATGCCTATCAA GTCCGATGGCTCCCTCTGCATCATGGAAGGCATGATGCCGTCGTCATCGCCAAAGCTCGAGGACTTCTTGGGGTGTGGCA ATGGCAGTGGCCATGACCCGGCCACCTACTATAGCCAGGGCCAAGAAGCAGAGGATGCAAGCAGGGCGGCCTACCAGCAC CACCAGCTAGTCCCCTACAACTACCAGCCATTGACGGAAGCAGAGATGCTGCAAGAGGCCGCAGCGGCGCCAATGGAGGA CGCAATGGCGGCGGCCAAGAACTTCCTCGTCACCAGCTACGGCGCCTGCTACGGCAACCAGGAGATGCCGCAGCCGCTCA GCCTCTCCATGAGCCCAGGGTCCCAGTCCAGCAGCTGCGTCAGTGCAGCTCCCCAGCAGCATCAGCAGATGGCGGTGGTC GCTGCAGCTGCTGCTGCTGGTGATGGCCAGGGAAGCAACAGTAATGACGGTGGCGAGCAGCGTGTCGGGAAGAAGAGGGG CACCGGGAAAGGGGGCCAAAAGCAGCCTGTTCACCGGAAGTCCATTGACACGTTTGGGCAGAGGACATCGCAGTATAGGG GCGTCACCAGGCACAGGTGGACTGGAAGATATGAAGCCCACCTCTGGGATAACAGTTGCAAAAAGGATGGACAGACAAGG AAGGGAAGGCAAGTATATCTAGGTGGTTATGACACTGAAGATAAAGCTGCGAGGGCTTATGATCTGGCTGCGCTGAAATA CTGGGGGCTATCTACGCATATAAATTTCCCGTTAGAAAACTACCGAGATGAGATCGAGGAGATGGAAAGGATGACAAGGC AAGAATATGTTGCGCACTTGAGAAGGAGAAGCAGCGGGTTCTCTCGCGGTGCTTCCATCTACCGGGGAGTAACAAGGCAT CACCAGCATGGAAGATGGCAAGCTCGGATTGGCAGGGTTGCTGGCAACAAGGACTTGTATCTCGGCACTTTCAGCACTCA AGAAGAAGCAGCAGAGGCATACGACATTGCTGCCATCAAGTTCCGTGGCCTGAACGCGGTGACGAACTTTGACATCACAA GGTACGACGTGGACAAGATCATGGAGAGCAGCTCGCTGCTGCCTGGTGAGGCAGCGCGTAAGGTGAAGGCGATCGAGGCA GCGCCGGACCATGTGCCAATAGGCCGCGAGCTCGGTGCGACCGAGGAAGCGAGCGCTGCTACTGTCACGGGCACCGACTG GAGAATGGTGCTCCATGGATCACAGCAGCAGCAAGCTGCAGCGTGCACCGAAGCAACGGCAGATCTTCAGAAGGGCTTCA TGGGTGACGCGCACTCGGCTCTCCACGGCATTGTCGGGTTCGACGTCGAGTCGGCGGCAGCTGACGAGATCGATGTCCCG GGAGGGAAGATCAGTGGCATCAACTTCTCGAACTCGTCTTCGCTGGTGACTAGCCTGAGCAACTCGAGGGAGGGGAGCCC TGAGAGGCTTGGCCTCGCCATGCTCTACGCCAAGCATCATCCCACCGCCGTCAGCCTCGCCGCCATGAACCCCTGGATGC CGATGCCGGCGCCGGCCGCAGCTCACGTGATGAGGCCGCCGAGTGCCATTGCTCATCTCCCTGTTTTTGCAGCCTGGACA GATGCTTAA |
Microexon DNA seq | TATATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGTTGCAAAAAGGATGGACAGACAAGGAAGGGAAGGCAAGTATATCTAGGTGGTTATGACACTGAAGATAAAGCTGCGAGGGCTTATGATCTGGCTGCG |
Microexon-tag Amino Acid seq | WDNSCKKDGQTRKGRQVYLGGYDTEDKAARAYDLAA |
Transcript ID | Os03t0232200-01 |
Gene ID | Os.17745 |
Gene Name | OsPLT9 |
Pfam domain motif | AP2 |
Motif E-value | 2.9e-13 |
Motif start | 291 |
Motif end | 349 |
Protein seq | >Os03t0232200-01 MASGGGSSNWLGFSLSPHMPAMEVPSSSEPSTAAHHHHHHHPPAAAAAAGAMSSPPDSATTCNFLFSPPAAQMVAPSPGY YYVGGAYGDGTSTAGVYYSHLPVMPIKSDGSLCIMEGMMPSSSPKLEDFLGCGNGSGHDPATYYSQGQEAEDASRAAYQH HQLVPYNYQPLTEAEMLQEAAAAPMEDAMAAAKNFLVTSYGACYGNQEMPQPLSLSMSPGSQSSSCVSAAPQQHQQMAVV AAAAAAGDGQGSNSNDGGEQRVGKKRGTGKGGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKDGQTR KGRQVYLGGYDTEDKAARAYDLAALKYWGLSTHINFPLENYRDEIEEMERMTRQEYVAHLRRRSSGFSRGASIYRGVTRH HQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDITRYDVDKIMESSSLLPGEAARKVKAIEA APDHVPIGRELGATEEASAATVTGTDWRMVLHGSQQQQAAACTEATADLQKGFMGDAHSALHGIVGFDVESAAADEIDVP GGKISGINFSNSSSLVTSLSNSREGSPERLGLAMLYAKHHPTAVSLAAMNPWMPMPAPAAAHVMRPPSAIAHLPVFAAWT DA* |
CDS seq | >Os03t0232200-01 ATGGCCAGCGGCGGCGGCAGCAGCAACTGGTTAGGCTTCTCGCTCTCCCCGCACATGCCGGCCATGGAGGTGCCGTCCTC CTCTGAGCCATCGACTGCTGCTCATCATCATCATCATCATCATCCACCTGCTGCTGCTGCTGCTGCCGGAGCCATGTCGT CTCCTCCCGACAGCGCCACGACCTGCAACTTCCTCTTCTCCCCTCCTGCAGCACAGATGGTCGCTCCTTCACCTGGCTAC TACTACGTCGGCGGCGCCTACGGAGACGGGACCAGCACCGCCGGCGTCTACTACTCGCACCTCCCTGTCATGCCTATCAA GTCCGATGGCTCCCTCTGCATCATGGAAGGCATGATGCCGTCGTCATCGCCAAAGCTCGAGGACTTCTTGGGGTGTGGCA ATGGCAGTGGCCATGACCCGGCCACCTACTATAGCCAGGGCCAAGAAGCAGAGGATGCAAGCAGGGCGGCCTACCAGCAC CACCAGCTAGTCCCCTACAACTACCAGCCATTGACGGAAGCAGAGATGCTGCAAGAGGCCGCAGCGGCGCCAATGGAGGA CGCAATGGCGGCGGCCAAGAACTTCCTCGTCACCAGCTACGGCGCCTGCTACGGCAACCAGGAGATGCCGCAGCCGCTCA GCCTCTCCATGAGCCCAGGGTCCCAGTCCAGCAGCTGCGTCAGTGCAGCTCCCCAGCAGCATCAGCAGATGGCGGTGGTC GCTGCAGCTGCTGCTGCTGGTGATGGCCAGGGAAGCAACAGTAATGACGGTGGCGAGCAGCGTGTCGGGAAGAAGAGGGG CACCGGGAAAGGGGGCCAAAAGCAGCCTGTTCACCGGAAGTCCATTGACACGTTTGGGCAGAGGACATCGCAGTATAGGG GCGTCACCAGGCACAGGTGGACTGGAAGATATGAAGCCCACCTCTGGGATAACAGTTGCAAAAAGGATGGACAGACAAGG AAGGGAAGGCAAGTATATCTAGGTGGTTATGACACTGAAGATAAAGCTGCGAGGGCTTATGATCTGGCTGCGCTGAAATA CTGGGGGCTATCTACGCATATAAATTTCCCGTTAGAAAACTACCGAGATGAGATCGAGGAGATGGAAAGGATGACAAGGC AAGAATATGTTGCGCACTTGAGAAGGAGAAGCAGCGGGTTCTCTCGCGGTGCTTCCATCTACCGGGGAGTAACAAGGCAT CACCAGCATGGAAGATGGCAAGCTCGGATTGGCAGGGTTGCTGGCAACAAGGACTTGTATCTCGGCACTTTCAGCACTCA AGAAGAAGCAGCAGAGGCATACGACATTGCTGCCATCAAGTTCCGTGGCCTGAACGCGGTGACGAACTTTGACATCACAA GGTACGACGTGGACAAGATCATGGAGAGCAGCTCGCTGCTGCCTGGTGAGGCAGCGCGTAAGGTGAAGGCGATCGAGGCA GCGCCGGACCATGTGCCAATAGGCCGCGAGCTCGGTGCGACCGAGGAAGCGAGCGCTGCTACTGTCACGGGCACCGACTG GAGAATGGTGCTCCATGGATCACAGCAGCAGCAAGCTGCAGCGTGCACCGAAGCAACGGCAGATCTTCAGAAGGGCTTCA TGGGTGACGCGCACTCGGCTCTCCACGGCATTGTCGGGTTCGACGTCGAGTCGGCGGCAGCTGACGAGATCGATGTCCCG GGAGGGAAGATCAGTGGCATCAACTTCTCGAACTCGTCTTCGCTGGTGACTAGCCTGAGCAACTCGAGGGAGGGGAGCCC TGAGAGGCTTGGCCTCGCCATGCTCTACGCCAAGCATCATCCCACCGCCGTCAGCCTCGCCGCCATGAACCCCTGGATGC CGATGCCGGCGCCGGCCGCAGCTCACGTGATGAGGCCGCCGAGTGCCATTGCTCATCTCCCTGTTTTTGCAGCCTGGACA GATGCTTAA |