Microexon ID Os_3:4059542-4059550:-
Species Oryza sativa
Coordinates 3:4059542..4059550
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTACTTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACACTTGCAGGAAGGAAGGCCAGACCAGGAAAGGAAGGCAAGTTTACTTAGGTGGCTATGACAAGGAGGAGAAGGCTGCAAGGGCTTATGATTTGGCAGCA
Microexon-tag Amino Acid Seq WDNTCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAA
Microexon-tag spanning region4059367-4059742
Microexon-tag prediction score0.9888
Overlapped with the annotated transcript (%) 100
New Transcript ID Os03t0176300-00x
Reference Transcript ID Os03t0176300-00
Gene ID Os03g0176300
Gene Name OsPLT10
Transcript ID Os03t0176300-00
Protein ID Os03t0176300-00
Gene ID Os03g0176300
Gene Name OsPLT10
Pfam domain motif AP2
Motif E-value 1.1e-13
Motif start 5
Motif end 63
Protein seq >Os03t0176300-00
QRTSQFRGVTRHRWTGRYEAHLWDNTCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELE
EMKHMTRQEFIAHLRRNSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNA
VTNFDISKYD
CDS seq >Os03t0176300-00
CAGAGGACGTCACAGTTCCGTGGCGTCACCAGACATAGATGGACTGGAAGATACGAGGCTCACTTGTGGGACAACACTTG
CAGGAAGGAAGGCCAGACCAGGAAAGGAAGGCAAGTTTACTTAGGTGGCTATGACAAGGAGGAGAAGGCTGCAAGGGCTT
ATGATTTGGCAGCACTCAAGTACTGGGGTCCAACAACTCACATAAATTTTCCATTGAGCACTTATGAGAAGGAGCTGGAG
GAGATGAAGCACATGACAAGGCAGGAGTTCATTGCCCACTTAAGAAGGAACAGCAGTGGCTTCTCGAGGGGAGCATCCAT
GTACAGAGGGGTGACGAGGCATCACCAGCACGGGAGATGGCAGGCAAGGATTGGAAGGGTCGCAGGGAACAAGGACCTGT
ATCTCGGCACCTTCAGCACGCAGGAGGAAGCGGCGGAGGCGTACGACATAGCGGCGATCAAGTTCCGCGGCCTGAACGCC
GTGACCAACTTCGACATCAGCAAGTACGACGT
Microexon DNA seq TTTACTTAG
Microexon Amino Acid seq FT*
Microexon-tag DNA Seq TGTGGGACAACACTTGCAGGAAGGAAGGCCAGACCAGGAAAGGAAGGCAAGTTTACTTAG
Microexon-tag Amino Acid seq CGTTLAGRKARPGKEGKFT*
Transcript ID Os.17295.1
Gene ID Os.17295
Gene Name OsPLT10
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Os.17295.1
MRHRQAAQASCRTTDHLRRSKTISSCLPMASTSWAHRTQWRRRRCTTPAAAAAASSTDPCRSPASSRGSGRQCTCRNGQR
RRCRSPCRPLPRARRRCRRRRCRWSASPLRRSGRGRHSSVASPDIDGLEDTRLTCGTTLAGRKARPGKEGKFT*
CDS seq >Os.17295.1
ATGCGCCACCGGCAGGCTGCACAGGCGTCCTGCCGGACCACCGACCACCTCCGCCGCAGCAAGACCATATCTTCCTGCCT
CCCCATGGCCAGTACTTCCTGGGCCCACCGAACCCAATGGCGCCGGCGCCGATGTACAACGCCGGCGGCGGCGGCGGCGG
CGTCGTCGACGGATCCATGTCGATCTCCGGCATCAAGTCGTGGCTCCGGCAGGCAATGTACGTGCCGGAACGGTCAGCGG
CGGCGCTGTCGCTCTCCGTGCCGGCCGCTCCCCCGAGCGAGGCGCCGCTGCCGCCGGCGGCGATGCCGGTGGTCCGCAAG
CCCGCTCAGACGTTCGGGCAGAGGACGTCACAGTTCCGTGGCGTCACCAGACATAGATGGACTGGAAGATACGAGGCTCA
CTTGTGGGACAACACTTGCAGGAAGGAAGGCCAGACCAGGAAAGGAAGGCAAGTTTACTTAG