
Microexon ID | Os_3:31923539-31923547:+ |
Species | Oryza sativa | Coordinates | 3:31923539..31923547 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGAAAAGGACGCCAAGTGTATCTTGGTGGGTATGACATGGAGGAGAAGGCTGCCAGGGCGTATGATCTTGCTGCG |
Microexon-tag Amino Acid Seq | WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAA |
Microexon-tag spanning region | 31923374-31923687 |
Microexon-tag prediction score | 0.9693 |
Overlapped with the annotated transcript (%) | 48.21 |
New Transcript ID | Os03t0770700-01x |
Reference Transcript ID | Os03t0770700-01 |
Gene ID | Os03g0770700 |
Gene Name | OsPLT7 |
Os_3:31923539-31923547:+ does not have available information here.
Microexon DNA seq | TGTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGAAAAGGACGCCAAGTGTATCTTGGTGGGTATGACATGGAGGAGAAGGCTGCCAGGGCGTATGATCTTGCTGCG |
Microexon-tag Amino Acid seq | WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAA |
Transcript ID | Os.20538.1 |
Gene ID | Os.20538 |
Gene Name | OsPLT7 |
Pfam domain motif | AP2 |
Motif E-value | 1.5e-13 |
Motif start | 305 |
Motif end | 363 |
Protein seq | >Os.20538.1 MASGNSSSSSGSMAATAGGVGGWLGFSLSPHMATYCAGGVDDVGHHHHHHVHQHQQQHGGGLFYNPAAVASSFYYGGGHD AVVTSAAGGGSYYGAGFSSMPLKSDGSLCIMEALRGGDQEQQGVVVSASPKLEDFLGAGPAMALSLDNSAFYYGGHGHHQ GHAQDGGAVGGDPHHGGGGFLQCAVIPGAGAGHDAALVHDQSAAAVAAGWAAMHGGGYDIANAAADDVCAAGPIIPTGGH LHPLTLSMSSAGSQSSCVTVQAAAAGEPYMAMDAVSKKRGGADRAGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEA HLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMSRQEYVAHLRRKSSG FSRGASIYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDITRYDVDKILESSTL LPGELARRKGKVGDGGGAAAVADAAAALVQAGNVAEWKMATAAALPAAARTEQQQQHGHGGHQHHDLLPSDAFSVLQDIV STVDAAGAPPRAPHMSMAATSLGNSREQSPDRGVGGGGGGGVLATLFAKPAAASKLYSPVPLNTWASPSPAVSSVPARAG VSIAHLPMFAAWTDA* |
CDS seq | >Os.20538.1 ATGGCCAGTGGCAACAGCAGCAGCAGCAGCGGCAGCATGGCTGCCACCGCCGGAGGTGTCGGCGGCTGGCTGGGATTCTC GCTGTCGCCGCACATGGCGACGTACTGCGCCGGCGGCGTCGACGATGTCGGCCACCACCACCACCACCACGTGCACCAGC ATCAGCAGCAGCATGGAGGTGGGCTGTTCTACAACCCTGCCGCCGTCGCCTCCTCCTTCTACTACGGCGGCGGGCATGAC GCCGTCGTCACCTCCGCGGCCGGCGGCGGATCGTACTATGGCGCCGGGTTCTCCTCCATGCCGCTCAAGTCCGACGGCTC GCTCTGCATCATGGAGGCACTCCGGGGAGGCGACCAAGAACAGCAAGGGGTGGTGGTGTCGGCGTCGCCCAAGCTGGAGG ATTTCCTAGGCGCGGGCCCCGCCATGGCGCTGAGCCTGGACAACTCCGCCTTCTACTACGGCGGCCACGGTCACCACCAG GGACACGCCCAGGACGGCGGCGCCGTCGGTGGCGACCCGCACCACGGCGGCGGCGGCTTCCTGCAGTGCGCTGTCATCCC CGGCGCCGGCGCCGGCCACGACGCGGCGCTGGTGCACGACCAGTCCGCCGCGGCAGTGGCGGCCGGCTGGGCGGCGATGC ACGGCGGCGGCTACGACATCGCCAACGCCGCCGCCGACGACGTCTGCGCCGCCGGCCCCATCATCCCCACCGGCGGCCAC CTGCACCCTCTCACCCTGTCCATGAGCTCGGCCGGGTCCCAGTCCAGCTGCGTCACCGTGCAGGCCGCCGCCGCCGGCGA GCCGTACATGGCCATGGACGCCGTGAGCAAGAAGCGCGGCGGCGCGGACCGCGCCGGGCAGAAGCAGCCGGTGCACCGCA AGTCCATTGACACGTTCGGCCAGAGGACGTCGCAGTACAGAGGCGTCACCAGGCATAGGTGGACTGGGAGATATGAGGCA CACCTCTGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGAAAAGGACGCCAAGTGTATCTTGGTGGGTATGACATGGA GGAGAAGGCTGCCAGGGCGTATGATCTTGCTGCGCTCAAGTACTGGGGCCCTTCCACGCACATCAACTTCCCGTTGGAGG ACTACCAGGAGGAGCTGGAGGAGATGAAGAACATGAGCAGGCAGGAGTATGTGGCTCACCTCAGAAGGAAAAGCAGTGGC TTCTCGCGTGGCGCTTCGATCTACCGTGGAGTCACCAGGCATCATCAGCACGGGAGATGGCAGGCGCGAATCGGCCGCGT CTCGGGCAACAAGGACCTTTACTTGGGGACATTCAGCACGCAGGAGGAGGCGGCGGAGGCGTACGACGTGGCGGCGATCA AGTTCCGGGGGCTCAACGCCGTCACCAACTTCGACATCACGAGGTACGACGTGGACAAGATCCTGGAGAGCAGCACGCTC CTCCCGGGGGAGCTGGCGCGGCGCAAGGGTAAGGTCGGCGACGGCGGCGGCGCGGCGGCGGTCGCCGACGCCGCGGCCGC CTTGGTGCAGGCCGGGAACGTGGCGGAGTGGAAGATGGCCACCGCCGCCGCGCTGCCAGCGGCGGCGAGAACGGAGCAGC AGCAGCAGCATGGGCACGGCGGCCACCAACACCATGACCTCCTGCCGAGCGACGCCTTCTCGGTGCTGCAGGACATCGTG TCGACCGTGGACGCGGCGGGCGCGCCGCCGCGCGCGCCGCACATGTCGATGGCGGCGACGAGCCTGGGCAACTCCCGGGA GCAGAGCCCTGACAGGGGCGTCGGCGGCGGCGGCGGCGGCGGCGTCCTCGCCACGCTGTTCGCCAAGCCCGCGGCGGCGT CGAAGCTGTACAGCCCGGTGCCGCTGAACACCTGGGCCTCGCCCTCGCCGGCGGTGAGCTCGGTGCCGGCGAGGGCCGGC GTGTCCATCGCGCACCTGCCAATGTTCGCCGCGTGGACCGACGCATGA |