Microexon ID Os_3:31923539-31923547:+
Species Oryza sativa
Coordinates 3:31923539..31923547
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGTATCTTG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGAAAAGGACGCCAAGTGTATCTTGGTGGGTATGACATGGAGGAGAAGGCTGCCAGGGCGTATGATCTTGCTGCG
Microexon-tag Amino Acid Seq WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAA
Microexon-tag spanning region31923374-31923687
Microexon-tag prediction score0.9693
Overlapped with the annotated transcript (%) 48.21
New Transcript ID Os03t0770700-01x
Reference Transcript ID Os03t0770700-01
Gene ID Os03g0770700
Gene Name OsPLT7
Os_3:31923539-31923547:+ does not have available information here.
Microexon DNA seq TGTATCTTG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGAAAAGGACGCCAAGTGTATCTTGGTGGGTATGACATGGAGGAGAAGGCTGCCAGGGCGTATGATCTTGCTGCG
Microexon-tag Amino Acid seq WDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAA
Transcript ID Os.20538.1
Gene ID Os.20538
Gene Name OsPLT7
Pfam domain motif AP2
Motif E-value 1.5e-13
Motif start 305
Motif end 363
Protein seq >Os.20538.1
MASGNSSSSSGSMAATAGGVGGWLGFSLSPHMATYCAGGVDDVGHHHHHHVHQHQQQHGGGLFYNPAAVASSFYYGGGHD
AVVTSAAGGGSYYGAGFSSMPLKSDGSLCIMEALRGGDQEQQGVVVSASPKLEDFLGAGPAMALSLDNSAFYYGGHGHHQ
GHAQDGGAVGGDPHHGGGGFLQCAVIPGAGAGHDAALVHDQSAAAVAAGWAAMHGGGYDIANAAADDVCAAGPIIPTGGH
LHPLTLSMSSAGSQSSCVTVQAAAAGEPYMAMDAVSKKRGGADRAGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEA
HLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMSRQEYVAHLRRKSSG
FSRGASIYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDITRYDVDKILESSTL
LPGELARRKGKVGDGGGAAAVADAAAALVQAGNVAEWKMATAAALPAAARTEQQQQHGHGGHQHHDLLPSDAFSVLQDIV
STVDAAGAPPRAPHMSMAATSLGNSREQSPDRGVGGGGGGGVLATLFAKPAAASKLYSPVPLNTWASPSPAVSSVPARAG
VSIAHLPMFAAWTDA*
CDS seq >Os.20538.1
ATGGCCAGTGGCAACAGCAGCAGCAGCAGCGGCAGCATGGCTGCCACCGCCGGAGGTGTCGGCGGCTGGCTGGGATTCTC
GCTGTCGCCGCACATGGCGACGTACTGCGCCGGCGGCGTCGACGATGTCGGCCACCACCACCACCACCACGTGCACCAGC
ATCAGCAGCAGCATGGAGGTGGGCTGTTCTACAACCCTGCCGCCGTCGCCTCCTCCTTCTACTACGGCGGCGGGCATGAC
GCCGTCGTCACCTCCGCGGCCGGCGGCGGATCGTACTATGGCGCCGGGTTCTCCTCCATGCCGCTCAAGTCCGACGGCTC
GCTCTGCATCATGGAGGCACTCCGGGGAGGCGACCAAGAACAGCAAGGGGTGGTGGTGTCGGCGTCGCCCAAGCTGGAGG
ATTTCCTAGGCGCGGGCCCCGCCATGGCGCTGAGCCTGGACAACTCCGCCTTCTACTACGGCGGCCACGGTCACCACCAG
GGACACGCCCAGGACGGCGGCGCCGTCGGTGGCGACCCGCACCACGGCGGCGGCGGCTTCCTGCAGTGCGCTGTCATCCC
CGGCGCCGGCGCCGGCCACGACGCGGCGCTGGTGCACGACCAGTCCGCCGCGGCAGTGGCGGCCGGCTGGGCGGCGATGC
ACGGCGGCGGCTACGACATCGCCAACGCCGCCGCCGACGACGTCTGCGCCGCCGGCCCCATCATCCCCACCGGCGGCCAC
CTGCACCCTCTCACCCTGTCCATGAGCTCGGCCGGGTCCCAGTCCAGCTGCGTCACCGTGCAGGCCGCCGCCGCCGGCGA
GCCGTACATGGCCATGGACGCCGTGAGCAAGAAGCGCGGCGGCGCGGACCGCGCCGGGCAGAAGCAGCCGGTGCACCGCA
AGTCCATTGACACGTTCGGCCAGAGGACGTCGCAGTACAGAGGCGTCACCAGGCATAGGTGGACTGGGAGATATGAGGCA
CACCTCTGGGACAACAGCTGCAAGAAGGAAGGCCAGACCAGAAAAGGACGCCAAGTGTATCTTGGTGGGTATGACATGGA
GGAGAAGGCTGCCAGGGCGTATGATCTTGCTGCGCTCAAGTACTGGGGCCCTTCCACGCACATCAACTTCCCGTTGGAGG
ACTACCAGGAGGAGCTGGAGGAGATGAAGAACATGAGCAGGCAGGAGTATGTGGCTCACCTCAGAAGGAAAAGCAGTGGC
TTCTCGCGTGGCGCTTCGATCTACCGTGGAGTCACCAGGCATCATCAGCACGGGAGATGGCAGGCGCGAATCGGCCGCGT
CTCGGGCAACAAGGACCTTTACTTGGGGACATTCAGCACGCAGGAGGAGGCGGCGGAGGCGTACGACGTGGCGGCGATCA
AGTTCCGGGGGCTCAACGCCGTCACCAACTTCGACATCACGAGGTACGACGTGGACAAGATCCTGGAGAGCAGCACGCTC
CTCCCGGGGGAGCTGGCGCGGCGCAAGGGTAAGGTCGGCGACGGCGGCGGCGCGGCGGCGGTCGCCGACGCCGCGGCCGC
CTTGGTGCAGGCCGGGAACGTGGCGGAGTGGAAGATGGCCACCGCCGCCGCGCTGCCAGCGGCGGCGAGAACGGAGCAGC
AGCAGCAGCATGGGCACGGCGGCCACCAACACCATGACCTCCTGCCGAGCGACGCCTTCTCGGTGCTGCAGGACATCGTG
TCGACCGTGGACGCGGCGGGCGCGCCGCCGCGCGCGCCGCACATGTCGATGGCGGCGACGAGCCTGGGCAACTCCCGGGA
GCAGAGCCCTGACAGGGGCGTCGGCGGCGGCGGCGGCGGCGGCGTCCTCGCCACGCTGTTCGCCAAGCCCGCGGCGGCGT
CGAAGCTGTACAGCCCGGTGCCGCTGAACACCTGGGCCTCGCCCTCGCCGGCGGTGAGCTCGGTGCCGGCGAGGGCCGGC
GTGTCCATCGCGCACCTGCCAATGTTCGCCGCGTGGACCGACGCATGA