Microexon ID Os_3:11186416-11186424:-
Species Oryza sativa
Coordinates 3:11186416..11186424
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACACGTGCCGGCGAGAAGGCCAGAAGCGCAAGGGCCGCCAAGTTTACTTGGGTGGCTATGACATAGAAGATAAGGCTGCTAGGGCATATGACCTTGCTGCT
Microexon-tag Amino Acid Seq WDNTCRREGQKRKGRQVYLGGYDIEDKAARAYDLAA
Microexon-tag spanning region11186278-11188700
Microexon-tag prediction score0.9512
Overlapped with the annotated transcript (%) 100
New Transcript ID Os03t0313100-01x
Reference Transcript ID Os03t0313100-01
Gene ID Os03g0313100
Gene Name AP2/EREBP#086
Transcript ID Os03t0313100-01
Protein ID Os03t0313100-01
Gene ID Os03g0313100
Gene Name AP2/EREBP#086
Pfam domain motif AP2
Motif E-value 1.9e-12
Motif start 133
Motif end 192
Protein seq >Os03t0313100-01
MSPPTNGAISLAFPPMGPLPADALIYPFDGLSYDDFVLPVAAAPQHPLPVAVADPAPLLLLPPPSSCTCNGASSGMGAVA
PRTLALGATTDGSVMTPTSWGSDGGGGGSSSARAVRSPSPVLPLVQGTGQRTSCYRGVTRHRWTGRYEAHLWDNTCRREG
QKRKGRQVYLGGYDIEDKAARAYDLAALKYWGANATTNFPKESYVKEIEEMQKMSKQELVASLRRKSSGFSRGASIYRGV
TRHHQHGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDVAALKFRGANAVTNFEPSRYNLEAISQSDLPISVSGRRHNSS
SNSNNPAPEAGGQITLMSSPPISQQSSSAPPYLIHNLLQFQPCGPPYAPPPPPPPPPPPPQALPLPGSYNFAEPVGFYWP
YGDGEEQKVQLNSNMVGMASGGFLHLANAAN*
CDS seq >Os03t0313100-01
ATGTCGCCGCCGACGAACGGCGCCATCTCGCTCGCGTTCCCGCCCATGGGGCCGCTGCCGGCGGACGCGCTGATCTACCC
GTTCGACGGCCTCTCCTACGACGACTTCGTCCTCCCTGTCGCCGCCGCACCGCAGCATCCGCTCCCCGTCGCCGTCGCCG
ACCCCGCGCCCCTCCTCCTCCTGCCGCCGCCGTCCTCCTGCACCTGCAACGGCGCCAGCAGCGGCATGGGCGCCGTTGCG
CCGCGCACGTTGGCTCTGGGCGCCACCACCGACGGCAGCGTGATGACCCCCACCAGCTGGGGCAGCGACGGCGGCGGCGG
CGGCTCCTCCTCCGCGCGGGCCGTGCGCTCGCCGTCGCCGGTGCTGCCGCTGGTGCAGGGCACCGGCCAGAGGACCTCCT
GCTACCGCGGCGTGACCAGGCACAGGTGGACGGGGCGATACGAGGCGCACCTGTGGGACAACACGTGCCGGCGAGAAGGC
CAGAAGCGCAAGGGCCGCCAAGTTTACTTGGGTGGCTATGACATAGAAGATAAGGCTGCTAGGGCATATGACCTTGCTGC
TCTGAAATATTGGGGTGCTAATGCTACCACTAACTTCCCTAAAGAAAGTTACGTGAAAGAGATTGAGGAGATGCAAAAGA
TGAGCAAGCAGGAGCTTGTAGCCTCACTAAGGAGGAAGAGCAGTGGCTTTTCTAGAGGTGCATCGATCTACAGAGGTGTA
ACAAGGCACCACCAACATGGCCGCTGGCAGGCAAGAATTGGTCGTGTTGCAGGCAACAAGGACTTGTATCTCGGCACCTT
TGCGACCGAAGAAGAAGCAGCGGAGGCGTATGACGTTGCAGCGCTGAAGTTCAGGGGCGCCAACGCCGTCACCAACTTCG
AGCCAAGCCGGTACAACCTGGAAGCGATCTCTCAGAGCGACCTCCCGATCAGCGTGTCCGGGAGGCGGCACAACAGCAGC
AGCAACAGCAACAATCCAGCACCAGAAGCAGGAGGCCAAATCACTCTGATGAGCAGCCCGCCGATCTCCCAGCAGTCGAG
CAGCGCGCCACCGTATCTCATCCACAACCTCCTGCAGTTCCAGCCATGTGGTCCCCCATACGCACCACCACCACCACCAC
CACCACCACCACCACCACCACAGGCTCTTCCGCTGCCAGGATCGTACAACTTTGCAGAGCCAGTAGGCTTCTACTGGCCC
TACGGCGATGGGGAGGAGCAGAAGGTTCAGCTCAACAGCAACATGGTTGGAATGGCTAGTGGTGGCTTTCTTCATCTGGC
CAATGCTGCCAACTGA
Microexon DNA seq TTTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACACGTGCCGGCGAGAAGGCCAGAAGCGCAAGGGCCGCCAAGTTTACTTGGGTGGCTATGACATAGAAGATAAGGCTGCTAGGGCATATGACCTTGCTGCT
Microexon-tag Amino Acid seq WDNTCRREGQKRKGRQVYLGGYDIEDKAARAYDLAA
Transcript ID Os03t0313100-01
Gene ID Os.18390
Gene Name AP2/EREBP#086
Pfam domain motif AP2
Motif E-value 1.9e-12
Motif start 133
Motif end 192
Protein seq >Os03t0313100-01
MSPPTNGAISLAFPPMGPLPADALIYPFDGLSYDDFVLPVAAAPQHPLPVAVADPAPLLLLPPPSSCTCNGASSGMGAVA
PRTLALGATTDGSVMTPTSWGSDGGGGGSSSARAVRSPSPVLPLVQGTGQRTSCYRGVTRHRWTGRYEAHLWDNTCRREG
QKRKGRQVYLGGYDIEDKAARAYDLAALKYWGANATTNFPKESYVKEIEEMQKMSKQELVASLRRKSSGFSRGASIYRGV
TRHHQHGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDVAALKFRGANAVTNFEPSRYNLEAISQSDLPISVSGRRHNSS
SNSNNPAPEAGGQITLMSSPPISQQSSSAPPYLIHNLLQFQPCGPPYAPPPPPPPPPPPPQALPLPGSYNFAEPVGFYWP
YGDGEEQKVQLNSNMVGMASGGFLHLANAAN*
CDS seq >Os03t0313100-01
ATGTCGCCGCCGACGAACGGCGCCATCTCGCTCGCGTTCCCGCCCATGGGGCCGCTGCCGGCGGACGCGCTGATCTACCC
GTTCGACGGCCTCTCCTACGACGACTTCGTCCTCCCTGTCGCCGCCGCACCGCAGCATCCGCTCCCCGTCGCCGTCGCCG
ACCCCGCGCCCCTCCTCCTCCTGCCGCCGCCGTCCTCCTGCACCTGCAACGGCGCCAGCAGCGGCATGGGCGCCGTTGCG
CCGCGCACGTTGGCTCTGGGCGCCACCACCGACGGCAGCGTGATGACCCCCACCAGCTGGGGCAGCGACGGCGGCGGCGG
CGGCTCCTCCTCCGCGCGGGCCGTGCGCTCGCCGTCGCCGGTGCTGCCGCTGGTGCAGGGCACCGGCCAGAGGACCTCCT
GCTACCGCGGCGTGACCAGGCACAGGTGGACGGGGCGATACGAGGCGCACCTGTGGGACAACACGTGCCGGCGAGAAGGC
CAGAAGCGCAAGGGCCGCCAAGTTTACTTGGGTGGCTATGACATAGAAGATAAGGCTGCTAGGGCATATGACCTTGCTGC
TCTGAAATATTGGGGTGCTAATGCTACCACTAACTTCCCTAAAGAAAGTTACGTGAAAGAGATTGAGGAGATGCAAAAGA
TGAGCAAGCAGGAGCTTGTAGCCTCACTAAGGAGGAAGAGCAGTGGCTTTTCTAGAGGTGCATCGATCTACAGAGGTGTA
ACAAGGCACCACCAACATGGCCGCTGGCAGGCAAGAATTGGTCGTGTTGCAGGCAACAAGGACTTGTATCTCGGCACCTT
TGCGACCGAAGAAGAAGCAGCGGAGGCGTATGACGTTGCAGCGCTGAAGTTCAGGGGCGCCAACGCCGTCACCAACTTCG
AGCCAAGCCGGTACAACCTGGAAGCGATCTCTCAGAGCGACCTCCCGATCAGCGTGTCCGGGAGGCGGCACAACAGCAGC
AGCAACAGCAACAATCCAGCACCAGAAGCAGGAGGCCAAATCACTCTGATGAGCAGCCCGCCGATCTCCCAGCAGTCGAG
CAGCGCGCCACCGTATCTCATCCACAACCTCCTGCAGTTCCAGCCATGTGGTCCCCCATACGCACCACCACCACCACCAC
CACCACCACCACCACCACCACAGGCTCTTCCGCTGCCAGGATCGTACAACTTTGCAGAGCCAGTAGGCTTCTACTGGCCC
TACGGCGATGGGGAGGAGCAGAAGGTTCAGCTCAACAGCAACATGGTTGGAATGGCTAGTGGTGGCTTTCTTCATCTGGC
CAATGCTGCCAACTGA