
Microexon ID | Os_3:11186416-11186424:- |
Species | Oryza sativa | Coordinates | 3:11186416..11186424 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACACGTGCCGGCGAGAAGGCCAGAAGCGCAAGGGCCGCCAAGTTTACTTGGGTGGCTATGACATAGAAGATAAGGCTGCTAGGGCATATGACCTTGCTGCT |
Microexon-tag Amino Acid Seq | WDNTCRREGQKRKGRQVYLGGYDIEDKAARAYDLAA |
Microexon-tag spanning region | 11186278-11188700 |
Microexon-tag prediction score | 0.9512 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os03t0313100-01x |
Reference Transcript ID | Os03t0313100-01 |
Gene ID | Os03g0313100 |
Gene Name | AP2/EREBP#086 |
Transcript ID | Os03t0313100-01 |
Protein ID | Os03t0313100-01 |
Gene ID | Os03g0313100 |
Gene Name | AP2/EREBP#086 |
Pfam domain motif | AP2 |
Motif E-value | 1.9e-12 |
Motif start | 133 |
Motif end | 192 |
Protein seq | >Os03t0313100-01 MSPPTNGAISLAFPPMGPLPADALIYPFDGLSYDDFVLPVAAAPQHPLPVAVADPAPLLLLPPPSSCTCNGASSGMGAVA PRTLALGATTDGSVMTPTSWGSDGGGGGSSSARAVRSPSPVLPLVQGTGQRTSCYRGVTRHRWTGRYEAHLWDNTCRREG QKRKGRQVYLGGYDIEDKAARAYDLAALKYWGANATTNFPKESYVKEIEEMQKMSKQELVASLRRKSSGFSRGASIYRGV TRHHQHGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDVAALKFRGANAVTNFEPSRYNLEAISQSDLPISVSGRRHNSS SNSNNPAPEAGGQITLMSSPPISQQSSSAPPYLIHNLLQFQPCGPPYAPPPPPPPPPPPPQALPLPGSYNFAEPVGFYWP YGDGEEQKVQLNSNMVGMASGGFLHLANAAN* |
CDS seq | >Os03t0313100-01 ATGTCGCCGCCGACGAACGGCGCCATCTCGCTCGCGTTCCCGCCCATGGGGCCGCTGCCGGCGGACGCGCTGATCTACCC GTTCGACGGCCTCTCCTACGACGACTTCGTCCTCCCTGTCGCCGCCGCACCGCAGCATCCGCTCCCCGTCGCCGTCGCCG ACCCCGCGCCCCTCCTCCTCCTGCCGCCGCCGTCCTCCTGCACCTGCAACGGCGCCAGCAGCGGCATGGGCGCCGTTGCG CCGCGCACGTTGGCTCTGGGCGCCACCACCGACGGCAGCGTGATGACCCCCACCAGCTGGGGCAGCGACGGCGGCGGCGG CGGCTCCTCCTCCGCGCGGGCCGTGCGCTCGCCGTCGCCGGTGCTGCCGCTGGTGCAGGGCACCGGCCAGAGGACCTCCT GCTACCGCGGCGTGACCAGGCACAGGTGGACGGGGCGATACGAGGCGCACCTGTGGGACAACACGTGCCGGCGAGAAGGC CAGAAGCGCAAGGGCCGCCAAGTTTACTTGGGTGGCTATGACATAGAAGATAAGGCTGCTAGGGCATATGACCTTGCTGC TCTGAAATATTGGGGTGCTAATGCTACCACTAACTTCCCTAAAGAAAGTTACGTGAAAGAGATTGAGGAGATGCAAAAGA TGAGCAAGCAGGAGCTTGTAGCCTCACTAAGGAGGAAGAGCAGTGGCTTTTCTAGAGGTGCATCGATCTACAGAGGTGTA ACAAGGCACCACCAACATGGCCGCTGGCAGGCAAGAATTGGTCGTGTTGCAGGCAACAAGGACTTGTATCTCGGCACCTT TGCGACCGAAGAAGAAGCAGCGGAGGCGTATGACGTTGCAGCGCTGAAGTTCAGGGGCGCCAACGCCGTCACCAACTTCG AGCCAAGCCGGTACAACCTGGAAGCGATCTCTCAGAGCGACCTCCCGATCAGCGTGTCCGGGAGGCGGCACAACAGCAGC AGCAACAGCAACAATCCAGCACCAGAAGCAGGAGGCCAAATCACTCTGATGAGCAGCCCGCCGATCTCCCAGCAGTCGAG CAGCGCGCCACCGTATCTCATCCACAACCTCCTGCAGTTCCAGCCATGTGGTCCCCCATACGCACCACCACCACCACCAC CACCACCACCACCACCACCACAGGCTCTTCCGCTGCCAGGATCGTACAACTTTGCAGAGCCAGTAGGCTTCTACTGGCCC TACGGCGATGGGGAGGAGCAGAAGGTTCAGCTCAACAGCAACATGGTTGGAATGGCTAGTGGTGGCTTTCTTCATCTGGC CAATGCTGCCAACTGA |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACACGTGCCGGCGAGAAGGCCAGAAGCGCAAGGGCCGCCAAGTTTACTTGGGTGGCTATGACATAGAAGATAAGGCTGCTAGGGCATATGACCTTGCTGCT |
Microexon-tag Amino Acid seq | WDNTCRREGQKRKGRQVYLGGYDIEDKAARAYDLAA |
Transcript ID | Os03t0313100-01 |
Gene ID | Os.18390 |
Gene Name | AP2/EREBP#086 |
Pfam domain motif | AP2 |
Motif E-value | 1.9e-12 |
Motif start | 133 |
Motif end | 192 |
Protein seq | >Os03t0313100-01 MSPPTNGAISLAFPPMGPLPADALIYPFDGLSYDDFVLPVAAAPQHPLPVAVADPAPLLLLPPPSSCTCNGASSGMGAVA PRTLALGATTDGSVMTPTSWGSDGGGGGSSSARAVRSPSPVLPLVQGTGQRTSCYRGVTRHRWTGRYEAHLWDNTCRREG QKRKGRQVYLGGYDIEDKAARAYDLAALKYWGANATTNFPKESYVKEIEEMQKMSKQELVASLRRKSSGFSRGASIYRGV TRHHQHGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDVAALKFRGANAVTNFEPSRYNLEAISQSDLPISVSGRRHNSS SNSNNPAPEAGGQITLMSSPPISQQSSSAPPYLIHNLLQFQPCGPPYAPPPPPPPPPPPPQALPLPGSYNFAEPVGFYWP YGDGEEQKVQLNSNMVGMASGGFLHLANAAN* |
CDS seq | >Os03t0313100-01 ATGTCGCCGCCGACGAACGGCGCCATCTCGCTCGCGTTCCCGCCCATGGGGCCGCTGCCGGCGGACGCGCTGATCTACCC GTTCGACGGCCTCTCCTACGACGACTTCGTCCTCCCTGTCGCCGCCGCACCGCAGCATCCGCTCCCCGTCGCCGTCGCCG ACCCCGCGCCCCTCCTCCTCCTGCCGCCGCCGTCCTCCTGCACCTGCAACGGCGCCAGCAGCGGCATGGGCGCCGTTGCG CCGCGCACGTTGGCTCTGGGCGCCACCACCGACGGCAGCGTGATGACCCCCACCAGCTGGGGCAGCGACGGCGGCGGCGG CGGCTCCTCCTCCGCGCGGGCCGTGCGCTCGCCGTCGCCGGTGCTGCCGCTGGTGCAGGGCACCGGCCAGAGGACCTCCT GCTACCGCGGCGTGACCAGGCACAGGTGGACGGGGCGATACGAGGCGCACCTGTGGGACAACACGTGCCGGCGAGAAGGC CAGAAGCGCAAGGGCCGCCAAGTTTACTTGGGTGGCTATGACATAGAAGATAAGGCTGCTAGGGCATATGACCTTGCTGC TCTGAAATATTGGGGTGCTAATGCTACCACTAACTTCCCTAAAGAAAGTTACGTGAAAGAGATTGAGGAGATGCAAAAGA TGAGCAAGCAGGAGCTTGTAGCCTCACTAAGGAGGAAGAGCAGTGGCTTTTCTAGAGGTGCATCGATCTACAGAGGTGTA ACAAGGCACCACCAACATGGCCGCTGGCAGGCAAGAATTGGTCGTGTTGCAGGCAACAAGGACTTGTATCTCGGCACCTT TGCGACCGAAGAAGAAGCAGCGGAGGCGTATGACGTTGCAGCGCTGAAGTTCAGGGGCGCCAACGCCGTCACCAACTTCG AGCCAAGCCGGTACAACCTGGAAGCGATCTCTCAGAGCGACCTCCCGATCAGCGTGTCCGGGAGGCGGCACAACAGCAGC AGCAACAGCAACAATCCAGCACCAGAAGCAGGAGGCCAAATCACTCTGATGAGCAGCCCGCCGATCTCCCAGCAGTCGAG CAGCGCGCCACCGTATCTCATCCACAACCTCCTGCAGTTCCAGCCATGTGGTCCCCCATACGCACCACCACCACCACCAC CACCACCACCACCACCACCACAGGCTCTTCCGCTGCCAGGATCGTACAACTTTGCAGAGCCAGTAGGCTTCTACTGGCCC TACGGCGATGGGGAGGAGCAGAAGGTTCAGCTCAACAGCAACATGGTTGGAATGGCTAGTGGTGGCTTTCTTCATCTGGC CAATGCTGCCAACTGA |