
Microexon ID | Os_2:31411205-31411213:- |
Species | Oryza sativa | Coordinates | 2:31411205..31411213 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAGTTCGTGCAGAATGGAAGGGCGGAGAAGAAAGGGAAGGCAAGTTTATTTAGGAAGTTATGATACCGAGGAAAAAGCTGCCAGGTCATATGATGTTGCAGCT |
Microexon-tag Amino Acid Seq | WDSSCRMEGRRRKGRQVYLGSYDTEEKAARSYDVAA |
Microexon-tag spanning region | 31411068-31412872 |
Microexon-tag prediction score | 0.936 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os02t0747600-01x |
Reference Transcript ID | Os02t0747600-01 |
Gene ID | Os02g0747600 |
Gene Name | AP2/EREBP#022 |
Transcript ID | Os02t0747600-01 |
Protein ID | Os02t0747600-01 |
Gene ID | Os02g0747600 |
Gene Name | AP2/EREBP#022 |
Pfam domain motif | AP2 |
Motif E-value | 1.6e-12 |
Motif start | 153 |
Motif end | 211 |
Protein seq | >Os02t0747600-01 SLPATAACAATAPDEDGLHSAVESGAKDSNTTKGVESLGTGHKKIPKREVVDEVDVQTCAEGKNDSVVPSSSKNPINDKN AKANVAENGQSADGIPEDQRVTILSVVKKDEPADDVRDSVNPVTVVGYRDEKGGTSGTAGTTAVRPAGTRSSSFHGVTRH RWSGKYEAHLWDSSCRMEGRRRKGRQVYLGSYDTEEKAARSYDVAALKYWGQNTKLNFSVSEYERELEDIRDMSREECVT YLRRRSSCFSRGASIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAAIEIRGKNAVTNFDRSNYMEK GMHCIEGAGLKLLASKPE* |
CDS seq | >Os02t0747600-01 TCGTTGCCAGCAACTGCGGCGTGTGCGGCGACCGCCCCGGATGAGGATGGCTTGCACTCTGCAGTGGAGTCAGGAGCTAA GGATTCGAACACCACGAAGGGAGTTGAGTCTCTTGGTACTGGTCACAAGAAGATCCCGAAACGTGAGGTAGTTGATGAAG TTGATGTTCAGACCTGTGCCGAAGGAAAGAACGATTCAGTGGTCCCTTCAAGCAGCAAGAACCCTATCAATGATAAGAAT GCAAAGGCAAATGTGGCAGAGAATGGACAGTCTGCTGATGGTATCCCTGAGGATCAGAGAGTTACTATTCTTAGTGTTGT CAAGAAGGATGAGCCTGCTGATGATGTTAGAGATTCAGTTAATCCTGTAACAGTCGTAGGTTATAGAGATGAGAAGGGTG GAACTAGTGGTACTGCTGGAACTACGGCTGTGCGACCTGCAGGCACCCGGTCATCTAGTTTCCATGGTGTGACCAGGCAT AGATGGAGTGGAAAATATGAAGCTCATCTGTGGGACAGTTCGTGCAGAATGGAAGGGCGGAGAAGAAAGGGAAGGCAAGT TTATTTAGGAAGTTATGATACCGAGGAAAAAGCTGCCAGGTCATATGATGTTGCAGCTCTTAAATACTGGGGCCAAAATA CAAAGCTGAATTTCTCGGTTTCAGAATACGAAAGGGAACTGGAGGACATAAGGGACATGTCTCGAGAGGAATGCGTAACA TACCTAAGAAGAAGAAGTAGCTGCTTCTCAAGAGGGGCTTCTATTTATAGAGGAGTTACTAGAAGGCAGAAAGATGGGAG GTGGCAGGCACGCATAGGACTGGTTGCTGGAACAAGAGACATTTACCTGGGAACTTTCAAAACTGAGGAAGAAGCAGCGG AGGCTTACGACATTGCTGCTATTGAGATCCGTGGCAAAAATGCGGTGACCAACTTTGATCGAAGCAACTACATGGAGAAG GGTATGCACTGTATAGAAGGGGCAGGCTTGAAGCTGCTTGCGTCTAAGCCAGAATGA |
Microexon DNA seq | TTTATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAGTTCGTGCAGAATGGAAGGGCGGAGAAGAAAGGGAAGGCAAGTTTATTTAGGAAGTTATGATACCGAGGAAAAAGCTGCCAGGTCATATGATGTTGCAGCT |
Microexon-tag Amino Acid seq | WDSSCRMEGRRRKGRQVYLGSYDTEEKAARSYDVAA |
Transcript ID | Os.15900.1 |
Gene ID | Os.15900 |
Gene Name | AP2/EREBP#022 |
Pfam domain motif | AP2 |
Motif E-value | 1.8e-12 |
Motif start | 182 |
Motif end | 240 |
Protein seq | >Os.15900.1 MESSLKEEKAAGESGDDEKAERSSPINLNSLPATAACAATAPDEDGLHSAVESGAKDSNTTKGVESLGTGHKKIPKREVV DEVDVQTCAEGKNDSVVPSSSKNPINDKNAKANVAENGQSADGIPEDQRVTILSVVKKDEPADDVRDSVNPVTVVGYRDE KGGTSGTAGTTAVRPAGTRSSSFHGVTRHRWSGKYEAHLWDSSCRMEGRRRKGRQVYLGSYDTEEKAARSYDVAALKYWG QNTKLNFSVSEYERELEDIRDMSREECVTYLRRRSSCFSRGASIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEE AAEAYDIAAIEIRGKNAVTNFDRSNYMEKGMHCIEGAGLKLLASKPE* |
CDS seq | >Os.15900.1 ATGGAGAGCTCTTTGAAAGAGGAGAAGGCTGCGGGCGAATCAGGGGATGATGAGAAGGCGGAGAGGAGCTCCCCTATCAA TCTGAATTCGTTGCCAGCAACTGCGGCGTGTGCGGCGACCGCCCCGGATGAGGATGGCTTGCACTCTGCAGTGGAGTCAG GAGCTAAGGATTCGAACACCACGAAGGGAGTTGAGTCTCTTGGTACTGGTCACAAGAAGATCCCGAAACGTGAGGTAGTT GATGAAGTTGATGTTCAGACCTGTGCCGAAGGAAAGAACGATTCAGTGGTCCCTTCAAGCAGCAAGAACCCTATCAATGA TAAGAATGCAAAGGCAAATGTGGCAGAGAATGGACAGTCTGCTGATGGTATCCCTGAGGATCAGAGAGTTACTATTCTTA GTGTTGTCAAGAAGGATGAGCCTGCTGATGATGTTAGAGATTCAGTTAATCCTGTAACAGTCGTAGGTTATAGAGATGAG AAGGGTGGAACTAGTGGTACTGCTGGAACTACGGCTGTGCGACCTGCAGGCACCCGGTCATCTAGTTTCCATGGTGTGAC CAGGCATAGATGGAGTGGAAAATATGAAGCTCATCTGTGGGACAGTTCGTGCAGAATGGAAGGGCGGAGAAGAAAGGGAA GGCAAGTTTATTTAGGAAGTTATGATACCGAGGAAAAAGCTGCCAGGTCATATGATGTTGCAGCTCTTAAATACTGGGGC CAAAATACAAAGCTGAATTTCTCGGTTTCAGAATACGAAAGGGAACTGGAGGACATAAGGGACATGTCTCGAGAGGAATG CGTAACATACCTAAGAAGAAGAAGTAGCTGCTTCTCAAGAGGGGCTTCTATTTATAGAGGAGTTACTAGAAGGCAGAAAG ATGGGAGGTGGCAGGCACGCATAGGACTGGTTGCTGGAACAAGAGACATTTACCTGGGAACTTTCAAAACTGAGGAAGAA GCAGCGGAGGCTTACGACATTGCTGCTATTGAGATCCGTGGCAAAAATGCGGTGACCAACTTTGATCGAAGCAACTACAT GGAGAAGGGTATGCACTGTATAGAAGGGGCAGGCTTGAAGCTGCTTGCGTCTAAGCCAGAATGA |