Microexon ID Os_2:31411205-31411213:-
Species Oryza sativa
Coordinates 2:31411205..31411213
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATTTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAGTTCGTGCAGAATGGAAGGGCGGAGAAGAAAGGGAAGGCAAGTTTATTTAGGAAGTTATGATACCGAGGAAAAAGCTGCCAGGTCATATGATGTTGCAGCT
Microexon-tag Amino Acid Seq WDSSCRMEGRRRKGRQVYLGSYDTEEKAARSYDVAA
Microexon-tag spanning region31411068-31412872
Microexon-tag prediction score0.936
Overlapped with the annotated transcript (%) 100
New Transcript ID Os02t0747600-01x
Reference Transcript ID Os02t0747600-01
Gene ID Os02g0747600
Gene Name AP2/EREBP#022
Transcript ID Os02t0747600-01
Protein ID Os02t0747600-01
Gene ID Os02g0747600
Gene Name AP2/EREBP#022
Pfam domain motif AP2
Motif E-value 1.6e-12
Motif start 153
Motif end 211
Protein seq >Os02t0747600-01
SLPATAACAATAPDEDGLHSAVESGAKDSNTTKGVESLGTGHKKIPKREVVDEVDVQTCAEGKNDSVVPSSSKNPINDKN
AKANVAENGQSADGIPEDQRVTILSVVKKDEPADDVRDSVNPVTVVGYRDEKGGTSGTAGTTAVRPAGTRSSSFHGVTRH
RWSGKYEAHLWDSSCRMEGRRRKGRQVYLGSYDTEEKAARSYDVAALKYWGQNTKLNFSVSEYERELEDIRDMSREECVT
YLRRRSSCFSRGASIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAAIEIRGKNAVTNFDRSNYMEK
GMHCIEGAGLKLLASKPE*
CDS seq >Os02t0747600-01
TCGTTGCCAGCAACTGCGGCGTGTGCGGCGACCGCCCCGGATGAGGATGGCTTGCACTCTGCAGTGGAGTCAGGAGCTAA
GGATTCGAACACCACGAAGGGAGTTGAGTCTCTTGGTACTGGTCACAAGAAGATCCCGAAACGTGAGGTAGTTGATGAAG
TTGATGTTCAGACCTGTGCCGAAGGAAAGAACGATTCAGTGGTCCCTTCAAGCAGCAAGAACCCTATCAATGATAAGAAT
GCAAAGGCAAATGTGGCAGAGAATGGACAGTCTGCTGATGGTATCCCTGAGGATCAGAGAGTTACTATTCTTAGTGTTGT
CAAGAAGGATGAGCCTGCTGATGATGTTAGAGATTCAGTTAATCCTGTAACAGTCGTAGGTTATAGAGATGAGAAGGGTG
GAACTAGTGGTACTGCTGGAACTACGGCTGTGCGACCTGCAGGCACCCGGTCATCTAGTTTCCATGGTGTGACCAGGCAT
AGATGGAGTGGAAAATATGAAGCTCATCTGTGGGACAGTTCGTGCAGAATGGAAGGGCGGAGAAGAAAGGGAAGGCAAGT
TTATTTAGGAAGTTATGATACCGAGGAAAAAGCTGCCAGGTCATATGATGTTGCAGCTCTTAAATACTGGGGCCAAAATA
CAAAGCTGAATTTCTCGGTTTCAGAATACGAAAGGGAACTGGAGGACATAAGGGACATGTCTCGAGAGGAATGCGTAACA
TACCTAAGAAGAAGAAGTAGCTGCTTCTCAAGAGGGGCTTCTATTTATAGAGGAGTTACTAGAAGGCAGAAAGATGGGAG
GTGGCAGGCACGCATAGGACTGGTTGCTGGAACAAGAGACATTTACCTGGGAACTTTCAAAACTGAGGAAGAAGCAGCGG
AGGCTTACGACATTGCTGCTATTGAGATCCGTGGCAAAAATGCGGTGACCAACTTTGATCGAAGCAACTACATGGAGAAG
GGTATGCACTGTATAGAAGGGGCAGGCTTGAAGCTGCTTGCGTCTAAGCCAGAATGA
Microexon DNA seq TTTATTTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAGTTCGTGCAGAATGGAAGGGCGGAGAAGAAAGGGAAGGCAAGTTTATTTAGGAAGTTATGATACCGAGGAAAAAGCTGCCAGGTCATATGATGTTGCAGCT
Microexon-tag Amino Acid seq WDSSCRMEGRRRKGRQVYLGSYDTEEKAARSYDVAA
Transcript ID Os.15900.1
Gene ID Os.15900
Gene Name AP2/EREBP#022
Pfam domain motif AP2
Motif E-value 1.8e-12
Motif start 182
Motif end 240
Protein seq >Os.15900.1
MESSLKEEKAAGESGDDEKAERSSPINLNSLPATAACAATAPDEDGLHSAVESGAKDSNTTKGVESLGTGHKKIPKREVV
DEVDVQTCAEGKNDSVVPSSSKNPINDKNAKANVAENGQSADGIPEDQRVTILSVVKKDEPADDVRDSVNPVTVVGYRDE
KGGTSGTAGTTAVRPAGTRSSSFHGVTRHRWSGKYEAHLWDSSCRMEGRRRKGRQVYLGSYDTEEKAARSYDVAALKYWG
QNTKLNFSVSEYERELEDIRDMSREECVTYLRRRSSCFSRGASIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEE
AAEAYDIAAIEIRGKNAVTNFDRSNYMEKGMHCIEGAGLKLLASKPE*
CDS seq >Os.15900.1
ATGGAGAGCTCTTTGAAAGAGGAGAAGGCTGCGGGCGAATCAGGGGATGATGAGAAGGCGGAGAGGAGCTCCCCTATCAA
TCTGAATTCGTTGCCAGCAACTGCGGCGTGTGCGGCGACCGCCCCGGATGAGGATGGCTTGCACTCTGCAGTGGAGTCAG
GAGCTAAGGATTCGAACACCACGAAGGGAGTTGAGTCTCTTGGTACTGGTCACAAGAAGATCCCGAAACGTGAGGTAGTT
GATGAAGTTGATGTTCAGACCTGTGCCGAAGGAAAGAACGATTCAGTGGTCCCTTCAAGCAGCAAGAACCCTATCAATGA
TAAGAATGCAAAGGCAAATGTGGCAGAGAATGGACAGTCTGCTGATGGTATCCCTGAGGATCAGAGAGTTACTATTCTTA
GTGTTGTCAAGAAGGATGAGCCTGCTGATGATGTTAGAGATTCAGTTAATCCTGTAACAGTCGTAGGTTATAGAGATGAG
AAGGGTGGAACTAGTGGTACTGCTGGAACTACGGCTGTGCGACCTGCAGGCACCCGGTCATCTAGTTTCCATGGTGTGAC
CAGGCATAGATGGAGTGGAAAATATGAAGCTCATCTGTGGGACAGTTCGTGCAGAATGGAAGGGCGGAGAAGAAAGGGAA
GGCAAGTTTATTTAGGAAGTTATGATACCGAGGAAAAAGCTGCCAGGTCATATGATGTTGCAGCTCTTAAATACTGGGGC
CAAAATACAAAGCTGAATTTCTCGGTTTCAGAATACGAAAGGGAACTGGAGGACATAAGGGACATGTCTCGAGAGGAATG
CGTAACATACCTAAGAAGAAGAAGTAGCTGCTTCTCAAGAGGGGCTTCTATTTATAGAGGAGTTACTAGAAGGCAGAAAG
ATGGGAGGTGGCAGGCACGCATAGGACTGGTTGCTGGAACAAGAGACATTTACCTGGGAACTTTCAAAACTGAGGAAGAA
GCAGCGGAGGCTTACGACATTGCTGCTATTGAGATCCGTGGCAAAAATGCGGTGACCAACTTTGATCGAAGCAACTACAT
GGAGAAGGGTATGCACTGTATAGAAGGGGCAGGCTTGAAGCTGCTTGCGTCTAAGCCAGAATGA