Microexon ID Os_2:24263820-24263828:+
Species Oryza sativa
Coordinates 2:24263820..24263828
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATCTTG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAATAGCTGTAGAAGAGAAGGGCAGAGTCGCAAGGGTAGGCAAGTTTATCTTGGTGGCTATGACAAGGAGGATAAAGCAGCGAGAGCTTATGATTTGGCAGCT
Microexon-tag Amino Acid Seq WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA
Microexon-tag spanning region24263601-24263969
Microexon-tag prediction score0.9684
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Os_2:24263820-24263828:+ does not have available information here.
Microexon DNA seq TTTATCTTG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAATAGCTGTAGAAGAGAAGGGCAGAGTCGCAAGGGTAGGCAAGTTTATCTTGGTGGCTATGACAAGGAGGATAAAGCAGCGAGAGCTTATGATTTGGCAGCT
Microexon-tag Amino Acid seq WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA
Transcript ID Os.14936.1
Gene ID Os.14936
Gene Name NA
Pfam domain motif AP2
Motif E-value 8.7e-12
Motif start 303
Motif end 361
Protein seq >Os.14936.1
MASANNWLGFSLSGQENPQPHQDSSPPAAIDVSGAGDFYGLPTSQPTAADAHLGVAGHHHNASYGIMEAFNRGAQEAQDW
NMRGLDYNGGASELSMLVGSSGGKRAAAVEETEPKLEDFLGGNSFVSEQDHHAAGGFLFSGVPMASSTNSNSGSNTMELS
MIKTWLRNNGQVPAGHQPQQQQPAAAAAAAQQQAHEAAEMSTDASASSFGCSSDAMGRSNNGGAVSAAAGGTSSQSLALS
MSTGSHSHLPIVVAGGGNASGGAAESTSSENKRASGAMDSPGGGAIEAVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHL
WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGTTTTTNFPISNYEKELDEMKHMTRQEYIAYLRRNSSGFS
RGASKYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESSTLPV
GGAARRLKEAADHAEAAGATIWRAADMDGAGVISGLADVGMGAYAASYHHHHHHGWPTIAFQQPPPLAVHYPYGQAPAAP
SRGWCKPEQDAAVAAAAHSLQDLQQLHLGSAAAHNFFQASSSSTVYNGGGGGYQGLGGNAFLMPASTVVADQGHSSTATN
HGNTCSYGNEEQGKLIGYDAMAMASGAAGGGYQLSQGSASTVSIARANGYSANWSSPFNGAMG*
CDS seq >Os.14936.1
ATGGCTTCTGCAAACAACTGGCTGGGCTTCTCGCTCTCCGGCCAAGAGAATCCGCAGCCTCACCAGGATAGCTCGCCTCC
GGCAGCCATCGACGTCTCCGGCGCCGGCGACTTCTATGGCCTGCCGACGTCGCAGCCGACGGCGGCCGACGCGCACCTCG
GCGTGGCGGGGCATCATCACAACGCCTCGTATGGCATCATGGAGGCCTTCAATAGGGGAGCTCAAGAGGCACAAGATTGG
AACATGAGGGGGCTGGACTACAACGGCGGCGCCTCGGAGCTGTCGATGCTCGTCGGCTCCAGCGGCGGCAAGAGGGCGGC
GGCGGTGGAGGAGACCGAGCCGAAGCTGGAGGACTTCCTCGGCGGCAACTCGTTCGTCTCCGAGCAAGATCATCACGCGG
CGGGGGGCTTCCTCTTCTCCGGCGTCCCGATGGCCAGCAGCACCAACAGCAACAGCGGGAGCAACACTATGGAGCTCTCC
ATGATCAAGACCTGGCTCCGGAACAACGGCCAGGTGCCCGCCGGCCACCAGCCGCAGCAGCAGCAGCCGGCGGCCGCGGC
CGCCGCCGCGCAGCAGCAGGCGCACGAGGCGGCGGAGATGAGCACCGACGCGAGCGCGAGCAGCTTCGGGTGCTCCTCCG
ACGCGATGGGGAGGAGTAACAACGGCGGCGCGGTCTCGGCGGCGGCCGGCGGGACGAGCTCGCAGAGCCTGGCGCTCTCG
ATGAGCACGGGCTCGCACTCGCACCTGCCTATCGTCGTCGCCGGCGGCGGGAACGCCAGCGGCGGAGCGGCCGAGAGCAC
ATCGTCGGAGAACAAGCGGGCCAGCGGCGCCATGGATTCGCCGGGCGGTGGCGCGATAGAGGCCGTGCCGAGGAAGTCCA
TCGACACGTTCGGGCAAAGGACCTCGATATATCGAGGTGTAACAAGGCATAGATGGACAGGGCGATATGAGGCTCATCTC
TGGGATAATAGCTGTAGAAGAGAAGGGCAGAGTCGCAAGGGTAGGCAAGTTTATCTTGGTGGCTATGACAAGGAGGATAA
AGCAGCGAGAGCTTATGATTTGGCAGCTCTGAAGTATTGGGGCACAACAACAACAACAAATTTCCCAATAAGTAACTATG
AAAAAGAGCTAGATGAAATGAAACATATGACCAGGCAGGAGTATATTGCATACCTAAGAAGGAATAGCAGTGGATTTTCT
CGTGGTGCATCGAAATATCGTGGTGTAACCAGGCACCATCAGCATGGGAGATGGCAAGCAAGGATAGGGAGGGTTGCAGG
AAACAAGGACCTCTACTTAGGCACCTTCAGCACCGAGGAGGAGGCGGCGGAGGCGTACGACATCGCGGCGATCAAGTTCC
GGGGGCTCAACGCCGTCACCAACTTTGACATGAGCCGCTACGACGTCAAGAGCATCCTGGAGAGCAGCACGCTGCCGGTG
GGCGGCGCGGCGAGGCGGCTGAAGGAGGCGGCGGACCACGCGGAGGCGGCCGGCGCCACCATCTGGCGCGCCGCCGACAT
GGACGGCGCCGGCGTCATCTCCGGCCTGGCCGACGTCGGGATGGGCGCCTACGCCGCCTCGTACCACCACCACCACCACC
ACGGCTGGCCGACCATCGCGTTCCAGCAGCCGCCGCCGCTCGCCGTGCACTACCCGTACGGCCAGGCGCCGGCGGCGCCG
TCGCGCGGGTGGTGCAAGCCCGAGCAGGACGCCGCCGTCGCTGCCGCCGCGCACAGCCTCCAGGACCTCCAGCAGCTGCA
CCTCGGCAGCGCCGCCGCCCACAACTTCTTCCAGGCGTCGTCGAGCTCGACGGTCTACAACGGCGGCGGCGGCGGGTACC
AGGGCCTCGGTGGCAACGCCTTCTTGATGCCGGCGAGCACCGTCGTGGCCGACCAGGGGCACAGCAGCACGGCCACCAAC
CATGGAAACACCTGCAGCTACGGCAACGAGGAGCAGGGGAAGCTCATCGGGTACGACGCCATGGCGATGGCGAGCGGCGC
CGCCGGCGGCGGGTACCAGCTGTCGCAGGGCTCGGCGTCGACGGTGAGCATCGCGAGGGCGAACGGCTACTCGGCCAACT
GGAGCTCGCCTTTCAATGGCGCCATGGGATGA