Microexon ID Os_12:1273480-1273488:-
Species Oryza sativa
Coordinates 12:1273480..1273488
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Os_12:1273480-1273488:- does not have available information here.
Transcript ID Os12t0126300-00
Protein ID Os12t0126300-00
Gene ID Os12g0126300
Gene Name AP2/EREBP#155
Pfam domain motif AP2
Motif E-value 1.8e-14
Motif start 80
Motif end 139
Protein seq >Os12t0126300-00
MAKRSSPDPASSSPSASSSPSSPSSSSSEDSSSPMSMPCKRRARPRTEKSTGKAKRPKKESKEVADPSSNGGGGGKRSSI
YRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQVYLGAYDSEEAAARAYDLAALKYWGPETVLNFPLEEYEKERSEMEG
VSREEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNF
DISCYLDQPQLLAQLQQEPQLLAQLQQEPQVVPALHEEPQDDDRSENAVQELSSSEANTSSDNNEPLAADDSAECMNEPL
PIVDGIEESLWSPCLDYELDTMPGAYFSNSMNFSEWFNDEAFEGGMEYLFEGCSSITEGGNSMDNSGMAEYNLFEECNML
EKDISDFLDKDISDFLDKDISISDRERISPQANNISCPQKMISVCN*
CDS seq >Os12t0126300-00
ATGGCGAAGAGATCGTCTCCTGATCCTGCATCATCTTCTCCATCTGCATCATCCTCGCCGTCGTCTCCTTCCTCCTCTTC
CTCCGAGGATTCCTCTTCGCCCATGTCGATGCCCTGCAAGAGGAGGGCGAGGCCGAGGACGGAGAAGAGCACCGGCAAGG
CCAAGAGGCCCAAGAAGGAGAGCAAGGAGGTGGCTGATCCTTCTTCCAATGGCGGCGGCGGCGGCAAGAGGAGTTCTATC
TACAGGGGAGTCACCAGGCATCGGTGGACTGGCAGATTTGAGGCCCATCTGTGGGACAAGAATTGCTCCACTTCACTTCA
GAACAAGAAGAAAGGGAGGCAAGTCTATTTGGGGGCTTATGATAGTGAGGAAGCAGCTGCTCGTGCATATGACCTTGCAG
CTCTTAAGTACTGGGGTCCTGAGACAGTGCTCAATTTCCCACTGGAGGAATATGAGAAGGAGAGGTCGGAGATGGAGGGT
GTGTCGAGGGAGGAGTACCTGGCCTCCCTCCGCCGCCGGAGCAGCGGTTTCTCCAGGGGTGTCTCCAAGTACAGAGGCGT
TGCCAGGCATCACCACAATGGGCGGTGGGAGGCACGGATAGGGCGGGTCCTGGGGAACAAGTACCTCTACCTGGGTACTT
TCGATACTCAAGAGGAGGCAGCCAAGGCCTATGATCTTGCTGCAATCGAATACCGAGGTGCCAATGCGGTAACCAACTTC
GACATCAGCTGCTACCTGGACCAGCCACAGTTACTGGCACAGCTGCAACAGGAACCACAGTTATTGGCACAACTGCAACA
AGAGCCACAGGTGGTGCCAGCATTACATGAAGAGCCTCAAGATGATGACCGAAGTGAGAATGCAGTCCAAGAGCTCAGTT
CCAGTGAAGCAAATACATCAAGTGACAACAATGAGCCACTTGCAGCCGATGACAGCGCCGAATGCATGAATGAACCCCTT
CCAATTGTTGATGGCATTGAAGAAAGCCTCTGGAGCCCTTGCTTGGATTATGAATTGGATACAATGCCTGGGGCTTACTT
CAGCAACTCGATGAATTTCAGTGAATGGTTCAATGATGAGGCATTCGAAGGCGGCATGGAGTACCTATTTGAAGGGTGCT
CCAGTATAACTGAAGGCGGCAACAGCATGGATAACTCAGGTATGGCAGAATACAATTTGTTTGAGGAATGCAATATGTTG
GAGAAGGACATTTCAGATTTTTTAGACAAGGACATTTCAGACTTTTTAGACAAGGACATTTCAATTTCAGATAGGGAGCG
AATATCTCCTCAAGCAAACAATATCTCCTGCCCTCAAAAAATGATCAGTGTGTGCAACTGA
Microexon DNA seq TCTATTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq GACAAGAATTGCTCCACTTCACTTCAGAACAAGAAGAAAGGGAGGCAAGTCTATTTGGGGGCTTATGATAGTGAGGAAGCAGCTGCTCGTGCATATGACCTTGCAGCT
Microexon-tag Amino Acid seq DKNCSTSLQNKKKGRQVYLGAYDSEEAAARAYDLAA
Transcript ID Os12t0126300-00
Gene ID Os.10251
Gene Name AP2/EREBP#155
Pfam domain motif AP2
Motif E-value 1.8e-14
Motif start 80
Motif end 139
Protein seq >Os12t0126300-00
MAKRSSPDPASSSPSASSSPSSPSSSSSEDSSSPMSMPCKRRARPRTEKSTGKAKRPKKESKEVADPSSNGGGGGKRSSI
YRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQVYLGAYDSEEAAARAYDLAALKYWGPETVLNFPLEEYEKERSEMEG
VSREEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNF
DISCYLDQPQLLAQLQQEPQLLAQLQQEPQVVPALHEEPQDDDRSENAVQELSSSEANTSSDNNEPLAADDSAECMNEPL
PIVDGIEESLWSPCLDYELDTMPGAYFSNSMNFSEWFNDEAFEGGMEYLFEGCSSITEGGNSMDNSGMAEYNLFEECNML
EKDISDFLDKDISDFLDKDISISDRERISPQANNISCPQKMISVCN*
CDS seq >Os12t0126300-00
ATGGCGAAGAGATCGTCTCCTGATCCTGCATCATCTTCTCCATCTGCATCATCCTCGCCGTCGTCTCCTTCCTCCTCTTC
CTCCGAGGATTCCTCTTCGCCCATGTCGATGCCCTGCAAGAGGAGGGCGAGGCCGAGGACGGAGAAGAGCACCGGCAAGG
CCAAGAGGCCCAAGAAGGAGAGCAAGGAGGTGGCTGATCCTTCTTCCAATGGCGGCGGCGGCGGCAAGAGGAGTTCTATC
TACAGGGGAGTCACCAGGCATCGGTGGACTGGCAGATTTGAGGCCCATCTGTGGGACAAGAATTGCTCCACTTCACTTCA
GAACAAGAAGAAAGGGAGGCAAGTCTATTTGGGGGCTTATGATAGTGAGGAAGCAGCTGCTCGTGCATATGACCTTGCAG
CTCTTAAGTACTGGGGTCCTGAGACAGTGCTCAATTTCCCACTGGAGGAATATGAGAAGGAGAGGTCGGAGATGGAGGGT
GTGTCGAGGGAGGAGTACCTGGCCTCCCTCCGCCGCCGGAGCAGCGGTTTCTCCAGGGGTGTCTCCAAGTACAGAGGCGT
TGCCAGGCATCACCACAATGGGCGGTGGGAGGCACGGATAGGGCGGGTCCTGGGGAACAAGTACCTCTACCTGGGTACTT
TCGATACTCAAGAGGAGGCAGCCAAGGCCTATGATCTTGCTGCAATCGAATACCGAGGTGCCAATGCGGTAACCAACTTC
GACATCAGCTGCTACCTGGACCAGCCACAGTTACTGGCACAGCTGCAACAGGAACCACAGTTATTGGCACAACTGCAACA
AGAGCCACAGGTGGTGCCAGCATTACATGAAGAGCCTCAAGATGATGACCGAAGTGAGAATGCAGTCCAAGAGCTCAGTT
CCAGTGAAGCAAATACATCAAGTGACAACAATGAGCCACTTGCAGCCGATGACAGCGCCGAATGCATGAATGAACCCCTT
CCAATTGTTGATGGCATTGAAGAAAGCCTCTGGAGCCCTTGCTTGGATTATGAATTGGATACAATGCCTGGGGCTTACTT
CAGCAACTCGATGAATTTCAGTGAATGGTTCAATGATGAGGCATTCGAAGGCGGCATGGAGTACCTATTTGAAGGGTGCT
CCAGTATAACTGAAGGCGGCAACAGCATGGATAACTCAGGTATGGCAGAATACAATTTGTTTGAGGAATGCAATATGTTG
GAGAAGGACATTTCAGATTTTTTAGACAAGGACATTTCAGACTTTTTAGACAAGGACATTTCAATTTCAGATAGGGAGCG
AATATCTCCTCAAGCAAACAATATCTCCTGCCCTCAAAAAATGATCAGTGTGTGCAACTGA