
Microexon ID | Os_12:1273480-1273488:- |
Species | Oryza sativa | Coordinates | 12:1273480..1273488 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Os_12:1273480-1273488:- does not have available information here.
Transcript ID | Os12t0126300-00 |
Protein ID | Os12t0126300-00 |
Gene ID | Os12g0126300 |
Gene Name | AP2/EREBP#155 |
Pfam domain motif | AP2 |
Motif E-value | 1.8e-14 |
Motif start | 80 |
Motif end | 139 |
Protein seq | >Os12t0126300-00 MAKRSSPDPASSSPSASSSPSSPSSSSSEDSSSPMSMPCKRRARPRTEKSTGKAKRPKKESKEVADPSSNGGGGGKRSSI YRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQVYLGAYDSEEAAARAYDLAALKYWGPETVLNFPLEEYEKERSEMEG VSREEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNF DISCYLDQPQLLAQLQQEPQLLAQLQQEPQVVPALHEEPQDDDRSENAVQELSSSEANTSSDNNEPLAADDSAECMNEPL PIVDGIEESLWSPCLDYELDTMPGAYFSNSMNFSEWFNDEAFEGGMEYLFEGCSSITEGGNSMDNSGMAEYNLFEECNML EKDISDFLDKDISDFLDKDISISDRERISPQANNISCPQKMISVCN* |
CDS seq | >Os12t0126300-00 ATGGCGAAGAGATCGTCTCCTGATCCTGCATCATCTTCTCCATCTGCATCATCCTCGCCGTCGTCTCCTTCCTCCTCTTC CTCCGAGGATTCCTCTTCGCCCATGTCGATGCCCTGCAAGAGGAGGGCGAGGCCGAGGACGGAGAAGAGCACCGGCAAGG CCAAGAGGCCCAAGAAGGAGAGCAAGGAGGTGGCTGATCCTTCTTCCAATGGCGGCGGCGGCGGCAAGAGGAGTTCTATC TACAGGGGAGTCACCAGGCATCGGTGGACTGGCAGATTTGAGGCCCATCTGTGGGACAAGAATTGCTCCACTTCACTTCA GAACAAGAAGAAAGGGAGGCAAGTCTATTTGGGGGCTTATGATAGTGAGGAAGCAGCTGCTCGTGCATATGACCTTGCAG CTCTTAAGTACTGGGGTCCTGAGACAGTGCTCAATTTCCCACTGGAGGAATATGAGAAGGAGAGGTCGGAGATGGAGGGT GTGTCGAGGGAGGAGTACCTGGCCTCCCTCCGCCGCCGGAGCAGCGGTTTCTCCAGGGGTGTCTCCAAGTACAGAGGCGT TGCCAGGCATCACCACAATGGGCGGTGGGAGGCACGGATAGGGCGGGTCCTGGGGAACAAGTACCTCTACCTGGGTACTT TCGATACTCAAGAGGAGGCAGCCAAGGCCTATGATCTTGCTGCAATCGAATACCGAGGTGCCAATGCGGTAACCAACTTC GACATCAGCTGCTACCTGGACCAGCCACAGTTACTGGCACAGCTGCAACAGGAACCACAGTTATTGGCACAACTGCAACA AGAGCCACAGGTGGTGCCAGCATTACATGAAGAGCCTCAAGATGATGACCGAAGTGAGAATGCAGTCCAAGAGCTCAGTT CCAGTGAAGCAAATACATCAAGTGACAACAATGAGCCACTTGCAGCCGATGACAGCGCCGAATGCATGAATGAACCCCTT CCAATTGTTGATGGCATTGAAGAAAGCCTCTGGAGCCCTTGCTTGGATTATGAATTGGATACAATGCCTGGGGCTTACTT CAGCAACTCGATGAATTTCAGTGAATGGTTCAATGATGAGGCATTCGAAGGCGGCATGGAGTACCTATTTGAAGGGTGCT CCAGTATAACTGAAGGCGGCAACAGCATGGATAACTCAGGTATGGCAGAATACAATTTGTTTGAGGAATGCAATATGTTG GAGAAGGACATTTCAGATTTTTTAGACAAGGACATTTCAGACTTTTTAGACAAGGACATTTCAATTTCAGATAGGGAGCG AATATCTCCTCAAGCAAACAATATCTCCTGCCCTCAAAAAATGATCAGTGTGTGCAACTGA |
Microexon DNA seq | TCTATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | GACAAGAATTGCTCCACTTCACTTCAGAACAAGAAGAAAGGGAGGCAAGTCTATTTGGGGGCTTATGATAGTGAGGAAGCAGCTGCTCGTGCATATGACCTTGCAGCT |
Microexon-tag Amino Acid seq | DKNCSTSLQNKKKGRQVYLGAYDSEEAAARAYDLAA |
Transcript ID | Os12t0126300-00 |
Gene ID | Os.10251 |
Gene Name | AP2/EREBP#155 |
Pfam domain motif | AP2 |
Motif E-value | 1.8e-14 |
Motif start | 80 |
Motif end | 139 |
Protein seq | >Os12t0126300-00 MAKRSSPDPASSSPSASSSPSSPSSSSSEDSSSPMSMPCKRRARPRTEKSTGKAKRPKKESKEVADPSSNGGGGGKRSSI YRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQVYLGAYDSEEAAARAYDLAALKYWGPETVLNFPLEEYEKERSEMEG VSREEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNF DISCYLDQPQLLAQLQQEPQLLAQLQQEPQVVPALHEEPQDDDRSENAVQELSSSEANTSSDNNEPLAADDSAECMNEPL PIVDGIEESLWSPCLDYELDTMPGAYFSNSMNFSEWFNDEAFEGGMEYLFEGCSSITEGGNSMDNSGMAEYNLFEECNML EKDISDFLDKDISDFLDKDISISDRERISPQANNISCPQKMISVCN* |
CDS seq | >Os12t0126300-00 ATGGCGAAGAGATCGTCTCCTGATCCTGCATCATCTTCTCCATCTGCATCATCCTCGCCGTCGTCTCCTTCCTCCTCTTC CTCCGAGGATTCCTCTTCGCCCATGTCGATGCCCTGCAAGAGGAGGGCGAGGCCGAGGACGGAGAAGAGCACCGGCAAGG CCAAGAGGCCCAAGAAGGAGAGCAAGGAGGTGGCTGATCCTTCTTCCAATGGCGGCGGCGGCGGCAAGAGGAGTTCTATC TACAGGGGAGTCACCAGGCATCGGTGGACTGGCAGATTTGAGGCCCATCTGTGGGACAAGAATTGCTCCACTTCACTTCA GAACAAGAAGAAAGGGAGGCAAGTCTATTTGGGGGCTTATGATAGTGAGGAAGCAGCTGCTCGTGCATATGACCTTGCAG CTCTTAAGTACTGGGGTCCTGAGACAGTGCTCAATTTCCCACTGGAGGAATATGAGAAGGAGAGGTCGGAGATGGAGGGT GTGTCGAGGGAGGAGTACCTGGCCTCCCTCCGCCGCCGGAGCAGCGGTTTCTCCAGGGGTGTCTCCAAGTACAGAGGCGT TGCCAGGCATCACCACAATGGGCGGTGGGAGGCACGGATAGGGCGGGTCCTGGGGAACAAGTACCTCTACCTGGGTACTT TCGATACTCAAGAGGAGGCAGCCAAGGCCTATGATCTTGCTGCAATCGAATACCGAGGTGCCAATGCGGTAACCAACTTC GACATCAGCTGCTACCTGGACCAGCCACAGTTACTGGCACAGCTGCAACAGGAACCACAGTTATTGGCACAACTGCAACA AGAGCCACAGGTGGTGCCAGCATTACATGAAGAGCCTCAAGATGATGACCGAAGTGAGAATGCAGTCCAAGAGCTCAGTT CCAGTGAAGCAAATACATCAAGTGACAACAATGAGCCACTTGCAGCCGATGACAGCGCCGAATGCATGAATGAACCCCTT CCAATTGTTGATGGCATTGAAGAAAGCCTCTGGAGCCCTTGCTTGGATTATGAATTGGATACAATGCCTGGGGCTTACTT CAGCAACTCGATGAATTTCAGTGAATGGTTCAATGATGAGGCATTCGAAGGCGGCATGGAGTACCTATTTGAAGGGTGCT CCAGTATAACTGAAGGCGGCAACAGCATGGATAACTCAGGTATGGCAGAATACAATTTGTTTGAGGAATGCAATATGTTG GAGAAGGACATTTCAGATTTTTTAGACAAGGACATTTCAGACTTTTTAGACAAGGACATTTCAATTTCAGATAGGGAGCG AATATCTCCTCAAGCAAACAATATCTCCTGCCCTCAAAAAATGATCAGTGTGTGCAACTGA |