
Microexon ID | Os_11:10866129-10866137:+ |
Species | Oryza sativa | Coordinates | 11:10866129..10866137 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TATATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGCTGCAGAAGAGAAGGTCAGACTCGCAAAGGCAGACAAGTATATCTTGGAGGATATGATAAGGAAGAAAAAGCTGCTAGGGCTTATGATTTGGCTGCC |
Microexon-tag Amino Acid Seq | WDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 10865948-10866290 |
Microexon-tag prediction score | 0.9775 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os11t0295900-01x |
Reference Transcript ID | Os11t0295900-01 |
Gene ID | Os11g0295900 |
Gene Name | OsPLT6 |
Transcript ID | Os11t0295900-01 |
Protein ID | Os11t0295900-01 |
Gene ID | Os11g0295900 |
Gene Name | OsPLT6 |
Pfam domain motif | AP2 |
Motif E-value | 3.2e-12 |
Motif start | 168 |
Motif end | 226 |
Protein seq | >Os11t0295900-01 MASITNWLGFSSSSFSGAGADPVLPHPPLQEWGSAYEGGGTVAAAGGEETAAPKLEDFLGMQVQQETAAAAAGHGRGGSS SVVGLSMIKNWLRSQPPPAVVGGEDAMMALAVSTSASPPVDATVPACISPDGMGSKAADGGGAAEAAAAAAAQRMKAAMD TFGQRTSIYRGVTKHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPVSNYEK ELDEMKHMNRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRG LNAVTNFDMSRYDVKSIIESSNLPIGTGTTRRLKDSSDHTDNVMDINVNTEPNNVVSSHFTNGVGNYGSQHYGYNGWSPI SMQPIPSQYANGQPRAWLKQEQDSSVVTAAQNLHNLHHFSSLGYTHNFFQQSDVPDVTGFVDAPSRSSDSYSFRYNGTNG FHGLPGGISYAMPVATAVDQGQGIHGYGEDGVAGIDTTHDLYGSRNVYYLSEGSLLADVEKEGDYGQSVGGNSWVLPTP* |
CDS seq | >Os11t0295900-01 ATGGCCTCCATCACCAACTGGCTCGGCTTCTCCTCCTCCTCCTTCTCCGGCGCCGGCGCCGACCCCGTCCTGCCCCACCC GCCGCTGCAAGAGTGGGGGAGCGCTTATGAGGGCGGCGGCACGGTGGCGGCCGCCGGCGGGGAGGAGACGGCGGCGCCGA AGCTGGAGGACTTCCTCGGCATGCAGGTGCAGCAGGAGACGGCCGCCGCGGCGGCGGGGCACGGCCGTGGAGGCAGCTCG TCGGTCGTTGGGCTGTCCATGATCAAGAACTGGCTACGCAGCCAGCCGCCGCCCGCGGTGGTTGGGGGAGAAGACGCTAT GATGGCGCTCGCGGTGTCGACGTCGGCGTCGCCGCCGGTGGACGCGACGGTGCCGGCCTGCATTTCGCCGGATGGGATGG GGTCGAAGGCGGCCGACGGCGGCGGCGCGGCCGAGGCGGCGGCGGCGGCGGCGGCGCAGAGGATGAAGGCGGCCATGGAC ACGTTCGGGCAGCGGACGTCCATCTACCGGGGTGTCACCAAGCACAGGTGGACAGGAAGGTATGAAGCCCATCTTTGGGA TAACAGCTGCAGAAGAGAAGGTCAGACTCGCAAAGGCAGACAAGTATATCTTGGAGGATATGATAAGGAAGAAAAAGCTG CTAGGGCTTATGATTTGGCTGCCCTTAAATACTGGGGCACTACAACGACGACGAATTTTCCGGTAAGCAACTACGAAAAA GAGTTGGATGAAATGAAGCACATGAATAGGCAGGAATTTGTTGCATCCCTTAGAAGAAAAAGCAGTGGATTTTCACGTGG TGCTTCCATATATCGTGGTGTTACAAGACACCATCAGCATGGAAGGTGGCAAGCAAGGATAGGACGGGTGGCAGGAAACA AGGATCTGTATTTGGGCACATTTGGCACCCAAGAGGAAGCTGCAGAGGCATATGATATCGCTGCAATCAAATTCCGTGGT CTCAATGCTGTGACAAACTTTGACATGAGCCGGTACGATGTCAAGAGCATCATTGAAAGCAGCAATCTCCCAATTGGTAC TGGAACCACCCGGCGATTGAAGGACTCCTCTGATCACACTGATAATGTCATGGACATCAATGTCAATACCGAACCCAATA ATGTGGTATCATCCCACTTCACCAATGGGGTTGGCAACTATGGTTCGCAGCATTATGGTTACAATGGATGGTCGCCAATT AGCATGCAGCCGATCCCCTCGCAGTACGCCAACGGCCAGCCCAGGGCATGGTTGAAACAAGAGCAGGACAGCTCTGTGGT TACAGCGGCGCAGAACCTGCACAATCTACATCATTTTAGTTCCTTGGGCTACACCCACAACTTCTTCCAGCAATCTGATG TTCCAGACGTCACAGGTTTCGTTGATGCGCCTTCGAGGTCCAGTGACTCATACTCCTTCAGGTACAATGGAACAAATGGC TTTCATGGTCTCCCGGGTGGAATCAGCTATGCTATGCCGGTTGCGACAGCGGTGGACCAAGGTCAGGGCATCCATGGCTA TGGAGAAGATGGTGTGGCAGGCATTGACACCACACATGACCTGTATGGCAGCCGTAATGTGTACTACCTTTCCGAGGGTT CGCTTCTTGCCGATGTCGAAAAAGAAGGCGACTATGGCCAATCTGTGGGGGGCAACAGCTGGGTTTTGCCGACACCGTAG |
Microexon DNA seq | TATATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGCTGCAGAAGAGAAGGTCAGACTCGCAAAGGCAGACAAGTATATCTTGGAGGATATGATAAGGAAGAAAAAGCTGCTAGGGCTTATGATTTGGCTGCC |
Microexon-tag Amino Acid seq | WDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAA |
Transcript ID | Os11t0295900-01 |
Gene ID | Os.8595 |
Gene Name | OsPLT6 |
Pfam domain motif | AP2 |
Motif E-value | 3.2e-12 |
Motif start | 168 |
Motif end | 226 |
Protein seq | >Os11t0295900-01 MASITNWLGFSSSSFSGAGADPVLPHPPLQEWGSAYEGGGTVAAAGGEETAAPKLEDFLGMQVQQETAAAAAGHGRGGSS SVVGLSMIKNWLRSQPPPAVVGGEDAMMALAVSTSASPPVDATVPACISPDGMGSKAADGGGAAEAAAAAAAQRMKAAMD TFGQRTSIYRGVTKHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPVSNYEK ELDEMKHMNRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRG LNAVTNFDMSRYDVKSIIESSNLPIGTGTTRRLKDSSDHTDNVMDINVNTEPNNVVSSHFTNGVGNYGSQHYGYNGWSPI SMQPIPSQYANGQPRAWLKQEQDSSVVTAAQNLHNLHHFSSLGYTHNFFQQSDVPDVTGFVDAPSRSSDSYSFRYNGTNG FHGLPGGISYAMPVATAVDQGQGIHGYGEDGVAGIDTTHDLYGSRNVYYLSEGSLLADVEKEGDYGQSVGGNSWVLPTP* |
CDS seq | >Os11t0295900-01 ATGGCCTCCATCACCAACTGGCTCGGCTTCTCCTCCTCCTCCTTCTCCGGCGCCGGCGCCGACCCCGTCCTGCCCCACCC GCCGCTGCAAGAGTGGGGGAGCGCTTATGAGGGCGGCGGCACGGTGGCGGCCGCCGGCGGGGAGGAGACGGCGGCGCCGA AGCTGGAGGACTTCCTCGGCATGCAGGTGCAGCAGGAGACGGCCGCCGCGGCGGCGGGGCACGGCCGTGGAGGCAGCTCG TCGGTCGTTGGGCTGTCCATGATCAAGAACTGGCTACGCAGCCAGCCGCCGCCCGCGGTGGTTGGGGGAGAAGACGCTAT GATGGCGCTCGCGGTGTCGACGTCGGCGTCGCCGCCGGTGGACGCGACGGTGCCGGCCTGCATTTCGCCGGATGGGATGG GGTCGAAGGCGGCCGACGGCGGCGGCGCGGCCGAGGCGGCGGCGGCGGCGGCGGCGCAGAGGATGAAGGCGGCCATGGAC ACGTTCGGGCAGCGGACGTCCATCTACCGGGGTGTCACCAAGCACAGGTGGACAGGAAGGTATGAAGCCCATCTTTGGGA TAACAGCTGCAGAAGAGAAGGTCAGACTCGCAAAGGCAGACAAGTATATCTTGGAGGATATGATAAGGAAGAAAAAGCTG CTAGGGCTTATGATTTGGCTGCCCTTAAATACTGGGGCACTACAACGACGACGAATTTTCCGGTAAGCAACTACGAAAAA GAGTTGGATGAAATGAAGCACATGAATAGGCAGGAATTTGTTGCATCCCTTAGAAGAAAAAGCAGTGGATTTTCACGTGG TGCTTCCATATATCGTGGTGTTACAAGACACCATCAGCATGGAAGGTGGCAAGCAAGGATAGGACGGGTGGCAGGAAACA AGGATCTGTATTTGGGCACATTTGGCACCCAAGAGGAAGCTGCAGAGGCATATGATATCGCTGCAATCAAATTCCGTGGT CTCAATGCTGTGACAAACTTTGACATGAGCCGGTACGATGTCAAGAGCATCATTGAAAGCAGCAATCTCCCAATTGGTAC TGGAACCACCCGGCGATTGAAGGACTCCTCTGATCACACTGATAATGTCATGGACATCAATGTCAATACCGAACCCAATA ATGTGGTATCATCCCACTTCACCAATGGGGTTGGCAACTATGGTTCGCAGCATTATGGTTACAATGGATGGTCGCCAATT AGCATGCAGCCGATCCCCTCGCAGTACGCCAACGGCCAGCCCAGGGCATGGTTGAAACAAGAGCAGGACAGCTCTGTGGT TACAGCGGCGCAGAACCTGCACAATCTACATCATTTTAGTTCCTTGGGCTACACCCACAACTTCTTCCAGCAATCTGATG TTCCAGACGTCACAGGTTTCGTTGATGCGCCTTCGAGGTCCAGTGACTCATACTCCTTCAGGTACAATGGAACAAATGGC TTTCATGGTCTCCCGGGTGGAATCAGCTATGCTATGCCGGTTGCGACAGCGGTGGACCAAGGTCAGGGCATCCATGGCTA TGGAGAAGATGGTGTGGCAGGCATTGACACCACACATGACCTGTATGGCAGCCGTAATGTGTACTACCTTTCCGAGGGTT CGCTTCTTGCCGATGTCGAAAAAGAAGGCGACTATGGCCAATCTGTGGGGGGCAACAGCTGGGTTTTGCCGACACCGTAG |