
Microexon ID | Os_1:39143737-39143745:- |
Species | Oryza sativa | Coordinates | 1:39143737..39143745 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAGAAGAGAGGGCCAAACTCGCAAGGGTCGTCAAGTCTATCTAGGTGGTTATGACAAAGAGGAAAAAGCTGCTAGAGCTTATGATTTGGCTGCT |
Microexon-tag Amino Acid Seq | WDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 39143562-39143941 |
Microexon-tag prediction score | 0.9686 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os01t0899800-01x |
Reference Transcript ID | Os01t0899800-01 |
Gene ID | Os01g0899800 |
Gene Name | OsPLT5 |
Transcript ID | Os01t0899800-01 |
Protein ID | Os01t0899800-01 |
Gene ID | Os01g0899800 |
Gene Name | OsPLT5 |
Pfam domain motif | AP2 |
Motif E-value | 6.9e-13 |
Motif start | 283 |
Motif end | 341 |
Protein seq | >Os01t0899800-01 MATMNNWLAFSLSPQDQLPPSQTNSTLISAAATTTTAGDSSTGDVCFNIPQDWSMRGSELSALVAEPKLEDFLGGISFSE QQHHHGGKGGVIPSSAAACYASSGSSVGYLYPPPSSSSLQFADSVMVATSSPVVAHDGVSGGGMVSAAAAAAASGNGGIG LSMIKNWLRSQPAPQPAQALSLSMNMAGTTTAQGGGAMALLAGAGERGRTTPASESLSTSAHGATTATMAGGRKEINEEG SGSAGAVVAVGSESGGSGAVVEAGAAAAAARKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLG GYDKEEKAARAYDLAALKYWGPTTTTNFPVNNYEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQA RIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVGTAAKRLKDAEAAAAYDVGR IASHLGGDGAYAAHYGHHHHSAAAAWPTIAFQAAAAPPPHAAGLYHPYAQPLRGWCKQEQDHAVIAAAHSLQDLHHLNLG AAAAAHDFFSQAMQQQHGLGSIDNASLEHSTGSNSVVYNGDNGGGGGGYIMAPMSAVSATATAVASSHDHGGDGGKQVQM GYDSYLVGADAYGGGGAGRMPSWAMTPASAPAATSSSDMTGVCHGAQLFSVWNDT* |
CDS seq | >Os01t0899800-01 ATGGCCACCATGAACAACTGGCTGGCCTTCTCCCTCTCCCCGCAGGATCAGCTCCCGCCGTCTCAGACCAACTCCACTCT CATCTCCGCCGCCGCCACCACCACCACCGCCGGCGACTCCTCCACCGGCGACGTCTGCTTCAACATCCCCCAAGATTGGA GCATGAGGGGATCGGAGCTCTCGGCGCTCGTCGCCGAGCCGAAGCTGGAGGACTTCCTCGGCGGCATCTCCTTCTCGGAG CAGCAGCATCATCACGGCGGCAAGGGCGGCGTGATCCCGAGCAGCGCCGCCGCTTGCTACGCGAGCTCCGGCAGCAGCGT CGGCTACCTGTACCCTCCTCCAAGCTCATCCTCGCTCCAGTTCGCCGACTCCGTCATGGTGGCCACCTCCTCGCCCGTCG TCGCCCACGACGGCGTCAGCGGCGGCGGCATGGTGAGCGCCGCCGCCGCCGCGGCGGCCAGTGGCAACGGCGGCATTGGC CTGTCCATGATCAAGAACTGGCTCCGGAGCCAGCCGGCGCCGCAGCCGGCGCAGGCGCTGTCTCTGTCCATGAACATGGC GGGGACGACGACGGCGCAGGGCGGCGGCGCCATGGCGCTCCTCGCCGGCGCAGGGGAGCGAGGCCGGACGACGCCCGCGT CAGAGAGCCTGTCCACGTCGGCGCACGGAGCGACGACGGCGACGATGGCTGGTGGTCGCAAGGAGATTAACGAGGAAGGC AGCGGCAGCGCCGGCGCCGTGGTTGCCGTCGGCTCGGAGTCAGGCGGCAGCGGCGCCGTGGTGGAGGCCGGCGCGGCGGC GGCGGCGGCGAGGAAGTCCGTCGACACGTTCGGCCAGAGAACATCGATCTACCGCGGCGTGACAAGGCATAGATGGACAG GGAGGTATGAGGCTCATCTTTGGGACAACAGCTGCAGAAGAGAGGGCCAAACTCGCAAGGGTCGTCAAGTCTATCTAGGT GGTTATGACAAAGAGGAAAAAGCTGCTAGAGCTTATGATTTGGCTGCTCTCAAATACTGGGGCCCGACGACGACGACAAA TTTTCCGGTAAATAACTATGAAAAGGAGCTGGAGGAGATGAAGCACATGACAAGGCAGGAGTTCGTAGCCTCTTTGAGAA GGAAGAGCAGTGGTTTCTCCAGAGGTGCATCCATTTACCGTGGAGTAACTAGGCATCACCAGCATGGGAGATGGCAAGCA AGGATAGGAAGAGTTGCAGGGAACAAGGACCTCTACTTGGGCACCTTCAGCACGCAGGAGGAGGCGGCGGAGGCGTACGA CATCGCGGCGATCAAGTTCCGGGGGCTCAACGCCGTCACCAACTTCGACATGAGCCGCTACGACGTCAAGAGCATCCTCG ACAGCGCTGCCCTCCCCGTCGGCACCGCCGCCAAGCGCCTCAAGGACGCCGAGGCCGCCGCCGCCTACGACGTCGGCCGC ATCGCCTCGCACCTCGGCGGCGACGGCGCCTACGCCGCGCATTACGGCCACCACCACCACTCGGCCGCCGCCGCCTGGCC GACCATCGCGTTCCAGGCGGCGGCGGCGCCGCCGCCGCACGCCGCCGGGCTTTACCACCCGTACGCGCAGCCGCTGCGTG GGTGGTGCAAGCAGGAGCAGGACCACGCCGTGATCGCGGCGGCGCACAGCCTGCAGGATCTCCACCACCTCAACCTCGGC GCCGCCGCCGCCGCGCATGACTTCTTCTCGCAGGCGATGCAGCAGCAGCACGGCCTCGGCAGCATCGACAACGCGTCGCT CGAGCACAGCACCGGCTCCAACTCCGTCGTCTACAACGGCGACAATGGCGGCGGAGGCGGCGGCTACATCATGGCGCCGA TGAGCGCCGTGTCGGCCACGGCCACCGCGGTGGCGAGCAGCCACGATCACGGCGGCGACGGCGGGAAGCAGGTGCAGATG GGGTACGACAGCTACCTCGTCGGCGCAGACGCCTACGGCGGCGGCGGCGCCGGGAGGATGCCATCCTGGGCGATGACGCC GGCGTCGGCGCCGGCCGCCACGAGCAGCAGCGACATGACCGGAGTCTGCCATGGCGCACAGCTCTTCAGCGTCTGGAACG ACACATAA |
Microexon DNA seq | TCTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAGAAGAGAGGGCCAAACTCGCAAGGGTCGTCAAGTCTATCTAGGTGGTTATGACAAAGAGGAAAAAGCTGCTAGAGCTTATGATTTGGCTGCT |
Microexon-tag Amino Acid seq | WDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAA |
Transcript ID | Os01t0899800-01 |
Gene ID | Os.4729 |
Gene Name | OsPLT5 |
Pfam domain motif | AP2 |
Motif E-value | 6.9e-13 |
Motif start | 283 |
Motif end | 341 |
Protein seq | >Os01t0899800-01 MATMNNWLAFSLSPQDQLPPSQTNSTLISAAATTTTAGDSSTGDVCFNIPQDWSMRGSELSALVAEPKLEDFLGGISFSE QQHHHGGKGGVIPSSAAACYASSGSSVGYLYPPPSSSSLQFADSVMVATSSPVVAHDGVSGGGMVSAAAAAAASGNGGIG LSMIKNWLRSQPAPQPAQALSLSMNMAGTTTAQGGGAMALLAGAGERGRTTPASESLSTSAHGATTATMAGGRKEINEEG SGSAGAVVAVGSESGGSGAVVEAGAAAAAARKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLG GYDKEEKAARAYDLAALKYWGPTTTTNFPVNNYEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQA RIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILDSAALPVGTAAKRLKDAEAAAAYDVGR IASHLGGDGAYAAHYGHHHHSAAAAWPTIAFQAAAAPPPHAAGLYHPYAQPLRGWCKQEQDHAVIAAAHSLQDLHHLNLG AAAAAHDFFSQAMQQQHGLGSIDNASLEHSTGSNSVVYNGDNGGGGGGYIMAPMSAVSATATAVASSHDHGGDGGKQVQM GYDSYLVGADAYGGGGAGRMPSWAMTPASAPAATSSSDMTGVCHGAQLFSVWNDT* |
CDS seq | >Os01t0899800-01 ATGGCCACCATGAACAACTGGCTGGCCTTCTCCCTCTCCCCGCAGGATCAGCTCCCGCCGTCTCAGACCAACTCCACTCT CATCTCCGCCGCCGCCACCACCACCACCGCCGGCGACTCCTCCACCGGCGACGTCTGCTTCAACATCCCCCAAGATTGGA GCATGAGGGGATCGGAGCTCTCGGCGCTCGTCGCCGAGCCGAAGCTGGAGGACTTCCTCGGCGGCATCTCCTTCTCGGAG CAGCAGCATCATCACGGCGGCAAGGGCGGCGTGATCCCGAGCAGCGCCGCCGCTTGCTACGCGAGCTCCGGCAGCAGCGT CGGCTACCTGTACCCTCCTCCAAGCTCATCCTCGCTCCAGTTCGCCGACTCCGTCATGGTGGCCACCTCCTCGCCCGTCG TCGCCCACGACGGCGTCAGCGGCGGCGGCATGGTGAGCGCCGCCGCCGCCGCGGCGGCCAGTGGCAACGGCGGCATTGGC CTGTCCATGATCAAGAACTGGCTCCGGAGCCAGCCGGCGCCGCAGCCGGCGCAGGCGCTGTCTCTGTCCATGAACATGGC GGGGACGACGACGGCGCAGGGCGGCGGCGCCATGGCGCTCCTCGCCGGCGCAGGGGAGCGAGGCCGGACGACGCCCGCGT CAGAGAGCCTGTCCACGTCGGCGCACGGAGCGACGACGGCGACGATGGCTGGTGGTCGCAAGGAGATTAACGAGGAAGGC AGCGGCAGCGCCGGCGCCGTGGTTGCCGTCGGCTCGGAGTCAGGCGGCAGCGGCGCCGTGGTGGAGGCCGGCGCGGCGGC GGCGGCGGCGAGGAAGTCCGTCGACACGTTCGGCCAGAGAACATCGATCTACCGCGGCGTGACAAGGCATAGATGGACAG GGAGGTATGAGGCTCATCTTTGGGACAACAGCTGCAGAAGAGAGGGCCAAACTCGCAAGGGTCGTCAAGTCTATCTAGGT GGTTATGACAAAGAGGAAAAAGCTGCTAGAGCTTATGATTTGGCTGCTCTCAAATACTGGGGCCCGACGACGACGACAAA TTTTCCGGTAAATAACTATGAAAAGGAGCTGGAGGAGATGAAGCACATGACAAGGCAGGAGTTCGTAGCCTCTTTGAGAA GGAAGAGCAGTGGTTTCTCCAGAGGTGCATCCATTTACCGTGGAGTAACTAGGCATCACCAGCATGGGAGATGGCAAGCA AGGATAGGAAGAGTTGCAGGGAACAAGGACCTCTACTTGGGCACCTTCAGCACGCAGGAGGAGGCGGCGGAGGCGTACGA CATCGCGGCGATCAAGTTCCGGGGGCTCAACGCCGTCACCAACTTCGACATGAGCCGCTACGACGTCAAGAGCATCCTCG ACAGCGCTGCCCTCCCCGTCGGCACCGCCGCCAAGCGCCTCAAGGACGCCGAGGCCGCCGCCGCCTACGACGTCGGCCGC ATCGCCTCGCACCTCGGCGGCGACGGCGCCTACGCCGCGCATTACGGCCACCACCACCACTCGGCCGCCGCCGCCTGGCC GACCATCGCGTTCCAGGCGGCGGCGGCGCCGCCGCCGCACGCCGCCGGGCTTTACCACCCGTACGCGCAGCCGCTGCGTG GGTGGTGCAAGCAGGAGCAGGACCACGCCGTGATCGCGGCGGCGCACAGCCTGCAGGATCTCCACCACCTCAACCTCGGC GCCGCCGCCGCCGCGCATGACTTCTTCTCGCAGGCGATGCAGCAGCAGCACGGCCTCGGCAGCATCGACAACGCGTCGCT CGAGCACAGCACCGGCTCCAACTCCGTCGTCTACAACGGCGACAATGGCGGCGGAGGCGGCGGCTACATCATGGCGCCGA TGAGCGCCGTGTCGGCCACGGCCACCGCGGTGGCGAGCAGCCACGATCACGGCGGCGACGGCGGGAAGCAGGTGCAGATG GGGTACGACAGCTACCTCGTCGGCGCAGACGCCTACGGCGGCGGCGGCGCCGGGAGGATGCCATCCTGGGCGATGACGCC GGCGTCGGCGCCGGCCGCCACGAGCAGCAGCGACATGACCGGAGTCTGCCATGGCGCACAGCTCTTCAGCGTCTGGAACG ACACATAA |