
Microexon ID | Hv_7H:604994415-604994423:- |
Species | Hordeum Vulgare | Coordinates | 7H:604994415..604994423 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCCGCCGGGAAGGCCAAAGCCGCAAAGGCCGCCAAGTCTATTTAGGAGGCTATGACAAGGAGGAGAAGGCGGCGAGGGCCTACGACATGGCTGCG |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDMAA |
Microexon-tag spanning region | 604994240-604994617 |
Microexon-tag prediction score | 0.9424 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.7HG0740370.1x |
Reference Transcript ID | HORVU.MOREX.r3.7HG0740370.1 |
Gene ID | HORVU.MOREX.r3.7HG0740370 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.7HG0740370.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.7HG0740370 |
Gene Name | |
Pfam domain motif | AP2 |
Motif E-value | 1.80E-11 |
Motif start | 132 |
Motif end | 189 |
Protein seq | >HORVU.MOREX.r3.7HG0740370.1 MDMDMSSAAHAAHHWLSFSLSNNYHHGLLEALSSSSSGHHIAGEEGPVDEAPKMEDFLGCAGGSAGTTSTAVVDQGELGS IAAGFLHRYPAHDGTPDQNSGAVTVAATTMEVAESDQARRPAETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSR KGRQVYLGGYDKEEKAARAYDMAALKYWGPTTTTNFPVSNYEKELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRH HQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLSAVTNFDMSRYDVESILNSDLPIGAGAAARASKFQP DVLSLPAPNVASPDMLPPAEKDYWSLLAMHYQQQQQQHLQQYPASAFETYGSGVNVDFTMGMGSANNASGGATVWGTTGA TGHGDVGSRQSNSYSSNIPYASMVSGSGATATGGYEGSTGNNGTWVTTSNPASTTAPQYYNYLFGME* |
CDS seq | >HORVU.MOREX.r3.7HG0740370.1 ATGGACATGGACATGAGCTCTGCTGCCCACGCTGCTCACCACTGGCTCTCCTTCTCCCTCTCCAACAACTACCACCACGG CCTCCTCGAGGCCCTCTCCAGCTCCTCCTCCGGCCACCACATCGCCGGAGAGGAAGGCCCCGTGGACGAGGCGCCTAAGA TGGAGGACTTCCTCGGCTGTGCCGGCGGCAGCGCCGGCACGACATCGACGGCTGTGGTAGACCAAGGCGAGCTGGGTAGC ATCGCCGCGGGGTTCTTGCATCGGTATCCGGCGCACGACGGTACGCCGGACCAGAACTCCGGCGCGGTGACCGTAGCGGC GACGACCATGGAGGTCGCCGAGTCCGATCAGGCGAGGAGGCCCGCCGAGACGTTTGGCCAGCGGACGTCAATCTACCGCG GCGTCACCAGGCACCGGTGGACGGGGAGGTATGAGGCGCACCTGTGGGACAACAGCTGCCGCCGGGAAGGCCAAAGCCGC AAAGGCCGCCAAGTCTATTTAGGAGGCTATGACAAGGAGGAGAAGGCGGCGAGGGCCTACGACATGGCTGCGCTGAAGTA CTGGGGTCCGACCACCACGACGAACTTCCCGGTGTCCAACTACGAGAAGGAGTTGGAGGAGATGAAGTCGATGACGCGGC AGGAGTTCATCGCTTCCCTTCGCAGGAAGAGCAGCGGCTTCTCACGAGGGGCGTCCATCTACAGAGGCGTAACAAGGCAT CATCAGCACGGCCGGTGGCAGGCAAGGATCGGCAGGGTGGCCGGAAACAAGGACCTGTACCTGGGAACTTTCAGCACGCA GGAGGAGGCGGCGGAGGCGTACGATATCGCGGCGATCAAGTTCCGTGGGCTCAGCGCCGTGACCAACTTCGACATGAGCC GCTACGACGTCGAGAGCATCCTCAACAGCGACCTGCCCATCGGTGCCGGGGCGGCCGCCCGCGCCTCCAAGTTCCAACCG GACGTCCTATCGCTGCCGGCGCCAAATGTGGCATCACCGGACATGCTGCCGCCGGCGGAGAAGGACTACTGGTCCCTGCT CGCCATGCACTACCAGCAGCAGCAGCAACAGCACCTGCAGCAGTACCCCGCCTCGGCATTCGAGACCTACGGGTCCGGCG TGAACGTGGACTTCACAATGGGCATGGGCAGCGCCAACAACGCCAGCGGCGGCGCCACCGTGTGGGGCACCACCGGTGCA ACAGGACACGGCGACGTCGGCAGCAGGCAGAGCAACAGCTACTCCAGCAACATTCCTTATGCTTCCATGGTGTCTGGATC AGGGGCAACAGCAACCGGGGGTTACGAGGGCTCCACCGGCAACAATGGCACCTGGGTGACGACGAGCAACCCGGCCAGCA CGACGGCTCCTCAGTACTACAACTATCTGTTTGGCATGGAGTAG |
Hv_7H:604994415-604994423:- does not have available information here.