Microexon ID Hv_7H:604994415-604994423:-
Species Hordeum   Vulgare
Coordinates 7H:604994415..604994423
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TCTATTTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAACAGCTGCCGCCGGGAAGGCCAAAGCCGCAAAGGCCGCCAAGTCTATTTAGGAGGCTATGACAAGGAGGAGAAGGCGGCGAGGGCCTACGACATGGCTGCG
Microexon-tag Amino Acid Seq WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDMAA
Microexon-tag spanning region604994240-604994617
Microexon-tag prediction score0.9424
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.7HG0740370.1x
Reference Transcript ID HORVU.MOREX.r3.7HG0740370.1
Gene ID HORVU.MOREX.r3.7HG0740370
Gene Name NA
Transcript ID HORVU.MOREX.r3.7HG0740370.1
Protein ID
Gene ID HORVU.MOREX.r3.7HG0740370
Gene Name
Pfam domain motif AP2
Motif E-value 1.80E-11
Motif start 132
Motif end 189
Protein seq >HORVU.MOREX.r3.7HG0740370.1
MDMDMSSAAHAAHHWLSFSLSNNYHHGLLEALSSSSSGHHIAGEEGPVDEAPKMEDFLGCAGGSAGTTSTAVVDQGELGS
IAAGFLHRYPAHDGTPDQNSGAVTVAATTMEVAESDQARRPAETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSR
KGRQVYLGGYDKEEKAARAYDMAALKYWGPTTTTNFPVSNYEKELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRH
HQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLSAVTNFDMSRYDVESILNSDLPIGAGAAARASKFQP
DVLSLPAPNVASPDMLPPAEKDYWSLLAMHYQQQQQQHLQQYPASAFETYGSGVNVDFTMGMGSANNASGGATVWGTTGA
TGHGDVGSRQSNSYSSNIPYASMVSGSGATATGGYEGSTGNNGTWVTTSNPASTTAPQYYNYLFGME*
CDS seq >HORVU.MOREX.r3.7HG0740370.1
ATGGACATGGACATGAGCTCTGCTGCCCACGCTGCTCACCACTGGCTCTCCTTCTCCCTCTCCAACAACTACCACCACGG
CCTCCTCGAGGCCCTCTCCAGCTCCTCCTCCGGCCACCACATCGCCGGAGAGGAAGGCCCCGTGGACGAGGCGCCTAAGA
TGGAGGACTTCCTCGGCTGTGCCGGCGGCAGCGCCGGCACGACATCGACGGCTGTGGTAGACCAAGGCGAGCTGGGTAGC
ATCGCCGCGGGGTTCTTGCATCGGTATCCGGCGCACGACGGTACGCCGGACCAGAACTCCGGCGCGGTGACCGTAGCGGC
GACGACCATGGAGGTCGCCGAGTCCGATCAGGCGAGGAGGCCCGCCGAGACGTTTGGCCAGCGGACGTCAATCTACCGCG
GCGTCACCAGGCACCGGTGGACGGGGAGGTATGAGGCGCACCTGTGGGACAACAGCTGCCGCCGGGAAGGCCAAAGCCGC
AAAGGCCGCCAAGTCTATTTAGGAGGCTATGACAAGGAGGAGAAGGCGGCGAGGGCCTACGACATGGCTGCGCTGAAGTA
CTGGGGTCCGACCACCACGACGAACTTCCCGGTGTCCAACTACGAGAAGGAGTTGGAGGAGATGAAGTCGATGACGCGGC
AGGAGTTCATCGCTTCCCTTCGCAGGAAGAGCAGCGGCTTCTCACGAGGGGCGTCCATCTACAGAGGCGTAACAAGGCAT
CATCAGCACGGCCGGTGGCAGGCAAGGATCGGCAGGGTGGCCGGAAACAAGGACCTGTACCTGGGAACTTTCAGCACGCA
GGAGGAGGCGGCGGAGGCGTACGATATCGCGGCGATCAAGTTCCGTGGGCTCAGCGCCGTGACCAACTTCGACATGAGCC
GCTACGACGTCGAGAGCATCCTCAACAGCGACCTGCCCATCGGTGCCGGGGCGGCCGCCCGCGCCTCCAAGTTCCAACCG
GACGTCCTATCGCTGCCGGCGCCAAATGTGGCATCACCGGACATGCTGCCGCCGGCGGAGAAGGACTACTGGTCCCTGCT
CGCCATGCACTACCAGCAGCAGCAGCAACAGCACCTGCAGCAGTACCCCGCCTCGGCATTCGAGACCTACGGGTCCGGCG
TGAACGTGGACTTCACAATGGGCATGGGCAGCGCCAACAACGCCAGCGGCGGCGCCACCGTGTGGGGCACCACCGGTGCA
ACAGGACACGGCGACGTCGGCAGCAGGCAGAGCAACAGCTACTCCAGCAACATTCCTTATGCTTCCATGGTGTCTGGATC
AGGGGCAACAGCAACCGGGGGTTACGAGGGCTCCACCGGCAACAATGGCACCTGGGTGACGACGAGCAACCCGGCCAGCA
CGACGGCTCCTCAGTACTACAACTATCTGTTTGGCATGGAGTAG
Hv_7H:604994415-604994423:- does not have available information here.