| Microexon ID | Hv_5H:534924023-534924031:+ |
| Species | Hordeum Vulgare | Coordinates | 5H:534924023..534924031 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATCTTG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAACAGCTGCCGGAAGGAGGGCCAGACCAGGAAAGGCCGGCAAGTTTATCTTGGTGGGTATGACATGGAGGAGAAGGCGGGGAGGGCGTATGATCTTGCGGCG |
| Microexon-tag Amino Acid Seq | WDNSCRKEGQTRKGRQVYLGGYDMEEKAGRAYDLAA |
| Microexon-tag spanning region | 534923736-534924298 |
| Microexon-tag prediction score | 0.9616 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | HORVU.MOREX.r3.5HG0513410.1x |
| Reference Transcript ID | HORVU.MOREX.r3.5HG0513410.1 |
| Gene ID | HORVU.MOREX.r3.5HG0513410 |
| Gene Name | NA |
| Transcript ID | HORVU.MOREX.r3.5HG0513410.1 |
| Protein ID | |
| Gene ID | HORVU.MOREX.r3.5HG0513410 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 8.10E-11 |
| Motif start | 294 |
| Motif end | 353 |
| Protein seq | >HORVU.MOREX.r3.5HG0513410.1 MTNGGHSMSGAGGWLGFSLSPQVAAAAMDAAAGSGIVDVAGHHHAHHGGVYYHPDPVASSPMSFYFGGGDNVGAASGGYY SGISALPLRSDGSLCLADALRRSEQKHHGAEVSAPPKLEDFLGAGPAMALSLDNSGYYYGGHSHDNDGAGGGQQPLLYAM MPGSGGHHMYYDAHAALLDEQAAATSAAMEAAGWMARDGDVYDVDAGNGEEGGGAIVPAGPGNPGGYAHPLTLSISSGSQ SSCVTVQQAAAQAHAYVGQATAASKKRGAGAGAKQNKQPVVHRKCIDTFGQRTSKYRGVTRHRWTGRYEAHLWDNSCRKE GQTRKGRQVYLGGYDMEEKAGRAYDLAALKYWGASTHINFPVEDYQEELEVMKNMTRLEYVAHIRRKSSGFSRGASMYRG VTRHHQQGRWQARIGRVSGNKDLYLGTFSAEADAAEAYDVAAIKFRGVSAVTNFEISRYDVDKIMESSTLLPADQVRRRK DGPDALVASAAAALVQAGGAADYWRQPVAAASAVTPCGDKQSRHHLDLMSSESLSLLRGVVSMDGDAAGAHGMGNSSSAR MSGASSLATSLSNSREQSPDQGGGLAMLFARPAVPKLASSLPMGSWVSSPTPARPGVSVAHMSVFAAWADA* |
| CDS seq | >HORVU.MOREX.r3.5HG0513410.1 ATGACCAACGGCGGCCACAGCATGAGCGGCGCGGGCGGCTGGCTGGGGTTCTCGCTCTCGCCTCAAGTCGCCGCCGCGGC CATGGACGCGGCTGCCGGCTCCGGCATCGTCGACGTCGCTGGCCACCACCACGCGCACCACGGCGGGGTCTACTACCACC CCGACCCGGTCGCGTCCTCCCCCATGTCCTTCTACTTCGGGGGCGGCGACAATGTCGGGGCGGCGAGCGGCGGGTACTAC TCCGGGATCTCCGCCCTGCCGCTCAGGTCCGACGGCTCGCTCTGTCTCGCCGACGCGCTCCGGAGGAGCGAGCAGAAACA CCACGGGGCGGAGGTGTCGGCGCCGCCGAAGCTCGAGGACTTCCTCGGCGCTGGTCCCGCAATGGCGCTGAGCCTGGACA ACTCCGGCTACTACTACGGCGGCCACAGCCACGACAACGATGGCGCTGGAGGCGGCCAGCAGCCGCTGCTGTACGCCATG ATGCCTGGCTCCGGTGGCCACCACATGTACTACGACGCCCACGCGGCGTTGCTGGACGAGCAGGCTGCAGCCACGTCGGC CGCGATGGAAGCGGCCGGCTGGATGGCGCGTGACGGGGACGTCTACGACGTGGACGCCGGCAACGGCGAGGAGGGCGGGG GCGCCATCGTGCCGGCCGGCCCCGGCAACCCAGGCGGATACGCACACCCGCTGACGCTGTCCATCAGCTCTGGGTCCCAA TCCAGCTGCGTCACCGTGCAGCAGGCGGCCGCACAAGCCCACGCCTACGTCGGCCAGGCAACCGCGGCCAGCAAGAAGCG CGGCGCCGGCGCGGGCGCCAAGCAAAACAAGCAGCCGGTGGTCCACCGCAAGTGCATCGACACCTTCGGCCAGCGCACGT CCAAGTACAGGGGCGTCACCAGGCATAGGTGGACGGGGAGGTATGAGGCGCACCTCTGGGACAACAGCTGCCGGAAGGAG GGCCAGACCAGGAAAGGCCGGCAAGTTTATCTTGGTGGGTATGACATGGAGGAGAAGGCGGGGAGGGCGTATGATCTTGC GGCGCTCAAGTACTGGGGCGCGTCCACGCACATCAACTTCCCGGTGGAGGACTACCAGGAGGAGCTGGAGGTGATGAAGA ACATGACCAGGCTAGAGTACGTGGCTCACATCAGAAGGAAGAGCAGCGGGTTCTCGCGCGGAGCTTCGATGTACCGGGGA GTCACCAGGCACCACCAGCAGGGGCGGTGGCAGGCGCGCATCGGCCGGGTTTCCGGCAACAAGGACCTCTACCTCGGAAC ATTCAGCGCGGAGGCGGACGCGGCAGAGGCGTACGACGTGGCGGCGATCAAGTTCCGCGGCGTCAGCGCGGTCACCAACT TCGAAATCAGCCGGTACGACGTGGACAAGATCATGGAGAGCAGCACGCTGCTGCCCGCCGATCAGGTGCGGCGCAGGAAG GACGGCCCCGACGCACTGGTGGCCAGCGCGGCGGCCGCGCTCGTGCAGGCCGGCGGCGCCGCGGACTACTGGAGGCAGCC CGTTGCGGCGGCGTCGGCGGTCACGCCGTGCGGCGACAAGCAGAGCCGCCACCACCTCGACCTCATGTCGAGCGAGTCCT TGTCGCTGCTGCGCGGCGTGGTGTCCATGGACGGCGACGCTGCTGGTGCTCACGGGATGGGAAACTCCAGCAGCGCGCGC ATGTCGGGCGCGTCGTCGTTGGCCACGAGCCTGAGCAACTCCCGGGAGCAGAGCCCGGACCAGGGAGGCGGCCTGGCCAT GCTGTTCGCCCGGCCCGCGGTGCCGAAGCTGGCGAGCTCGCTGCCCATGGGCTCCTGGGTCTCGTCGCCTACGCCGGCCA GGCCCGGCGTGTCCGTGGCGCACATGTCAGTGTTCGCCGCGTGGGCGGACGCATGA |
Hv_5H:534924023-534924031:+ does not have available information here.