| Microexon ID | Hv_4H:521758568-521758576:+ |
| Species | Hordeum Vulgare | Coordinates | 4H:521758568..521758576 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATCTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAACAGTTGCAAGAAGGATGGGCAGACGAGGAAAGGGAGGCAAGTTTATCTAGGTGGTTATGACAATGAAGACAAGGCTGCCAGGGCTTATGATCTGGCTGCT |
| Microexon-tag Amino Acid Seq | WDNSCKKDGQTRKGRQVYLGGYDNEDKAARAYDLAA |
| Microexon-tag spanning region | 521758388-521758716 |
| Microexon-tag prediction score | 0.9767 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | HORVU.MOREX.r3.4HG0394710.1x |
| Reference Transcript ID | HORVU.MOREX.r3.4HG0394710.1 |
| Gene ID | HORVU.MOREX.r3.4HG0394710 |
| Gene Name | NA |
| Transcript ID | HORVU.MOREX.r3.4HG0394710.1 |
| Protein ID | |
| Gene ID | HORVU.MOREX.r3.4HG0394710 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 3.50E-11 |
| Motif start | 288 |
| Motif end | 346 |
| Protein seq | >HORVU.MOREX.r3.4HG0394710.1 MRAMAGGGTNCLGFSLSPHIDMAMEVPSSSGPDHAQPASASAMSTNAATCNFLFSPPAQMAAPPPGYYYIGGAYGDGTST AGVYYSHHPVMPVTSDGSLCIMEGMMPSSSPKLEDFLGGGNDGGHDTVTYYSHHHQQQGQQDQEGSRVYQHHQHYQQQQQ ELAPYNFQHLTEAEAIYQEATAPMDDAMAAAKNLLVTSYGSCYSNAGMQPLSLSMSPSSQSSSCVSAAPQQHQMAAVASA AASMAASQGGSNGGGEQCVGKKRGTGKGGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKDGQTRKGR QVYLGGYDNEDKAARAYDLAALKYWGPSTNTNFPLETYREEVEEMKSMTRQEFIAHLRRRSSGFSRGASIYRGVTRHHQH GKWQARIGRVAGNKDLYLGTFTTQEEAAEAYDVAAIKFRGLNAVTNFDITRYDVDKIMESSSLLPGEEARKVKPIEAANH VPANAMHNGGAELSHAEEGSSGVWKMVLHGTPQQAAPCTTEVADIQKGFMDGDSRSSLHGVAGLDAESAAHEIDASGKIN YSNSSSLVTSLSNSREGSPERFSLPSLYAKHPNAVSLATMSPWMAMPAPTATHALRGPNSSIPTMPVFAAWTDA* |
| CDS seq | >HORVU.MOREX.r3.4HG0394710.1 ATGAGAGCAATGGCCGGCGGCGGCACCAACTGCTTAGGCTTCTCCCTCTCCCCACACATTGACATGGCCATGGAGGTGCC CTCCTCCTCTGGACCCGACCACGCTCAGCCTGCTAGCGCTAGTGCTATGTCCACCAACGCCGCGACCTGCAACTTCCTCT TCTCCCCTCCCGCGCAAATGGCCGCTCCACCTCCTGGCTACTACTACATCGGCGGCGCCTATGGGGATGGCACCAGCACC GCCGGCGTCTACTACTCCCACCACCCCGTCATGCCCGTCACGTCCGATGGATCCCTGTGCATCATGGAAGGCATGATGCC GTCGTCCTCGCCGAAGCTCGAGGACTTCTTGGGCGGCGGCAATGACGGTGGACACGACACAGTCACCTACTACAGCCACC ACCACCAGCAGCAGGGCCAGCAAGACCAGGAGGGAAGCAGAGTCTACCAGCACCATCAGCACTATCAGCAGCAGCAGCAG GAGCTAGCGCCCTACAACTTCCAGCACTTGACGGAAGCAGAGGCGATCTACCAAGAGGCCACGGCGCCGATGGACGATGC AATGGCCGCTGCCAAGAACCTGCTGGTGACAAGCTACGGGTCATGCTACAGCAACGCGGGGATGCAGCCGCTGAGCCTGT CCATGAGCCCCAGTTCCCAGTCCAGCAGCTGCGTCAGCGCAGCTCCTCAGCAGCATCAGATGGCTGCGGTTGCTTCTGCT GCTGCCTCTATGGCAGCTTCCCAGGGAGGCAGTAATGGTGGCGGGGAGCAGTGTGTGGGGAAGAAGAGGGGCACTGGGAA GGGAGGCCAGAAGCAGCCCGTTCACCGCAAGTCCATTGACACGTTTGGGCAGAGGACCTCCCAGTATAGGGGCGTCACCA GGCACAGGTGGACTGGGAGATATGAAGCCCACCTCTGGGACAACAGTTGCAAGAAGGATGGGCAGACGAGGAAAGGGAGG CAAGTTTATCTAGGTGGTTATGACAATGAAGACAAGGCTGCCAGGGCTTATGATCTGGCTGCTCTGAAATATTGGGGGCC GTCGACGAACACCAATTTCCCGCTAGAAACTTATCGAGAGGAGGTCGAGGAGATGAAAAGCATGACAAGGCAGGAATTCA TTGCACACTTGAGAAGGAGAAGCAGCGGGTTTTCTCGTGGTGCTTCGATATATCGAGGAGTGACGAGGCATCATCAGCAT GGAAAATGGCAAGCTAGGATTGGCAGGGTTGCTGGGAACAAAGACTTGTATCTCGGCACTTTCACCACTCAGGAAGAAGC AGCTGAGGCCTATGACGTAGCCGCGATCAAGTTCCGTGGCCTGAACGCCGTAACCAACTTCGACATAACGAGGTACGACG TGGACAAGATCATGGAGAGCAGCTCTCTGCTGCCCGGGGAGGAAGCGCGCAAGGTCAAGCCGATCGAGGCGGCCAACCAC GTGCCTGCCAATGCCATGCACAACGGCGGCGCGGAGCTCAGCCATGCCGAAGAAGGAAGCTCCGGCGTCTGGAAGATGGT GCTCCACGGGACACCACAACAAGCAGCGCCGTGCACCACCGAGGTGGCCGACATTCAGAAGGGGTTCATGGACGGCGACT CTCGCTCGTCCCTGCATGGCGTCGCCGGGCTCGACGCCGAGTCTGCGGCACATGAGATCGACGCTTCAGGCAAGATCAAC TACTCCAACTCGTCTTCCCTGGTGACCAGCCTCAGCAACTCGAGGGAGGGGAGCCCGGAGAGGTTCAGCCTGCCCTCGCT GTACGCCAAGCATCCCAACGCCGTTAGCCTCGCTACCATGAGCCCGTGGATGGCGATGCCGGCGCCGACCGCCACCCACG CGTTGAGGGGGCCGAATTCCTCCATCCCAACCATGCCTGTGTTTGCTGCCTGGACGGACGCATAG |
Hv_4H:521758568-521758576:+ does not have available information here.