| Microexon ID | Hv_2H:550367554-550367562:+ |
| Species | Hordeum Vulgare | Coordinates | 2H:550367554..550367562 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATCTGG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAATAGTTGCAGGAGAGAGGGGCAAACTCGCAAGGGGAAACAAGTTTATCTGGGCGGTTATGACAAAGAAGACAAGGCAGCTAGGGCTTATGATTTGGCAGCT |
| Microexon-tag Amino Acid Seq | WDNSCRREGQTRKGKQVYLGGYDKEDKAARAYDLAA |
| Microexon-tag spanning region | 550367291-550367720 |
| Microexon-tag prediction score | 0.9717 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | HORVU.MOREX.r3.2HG0179920.1x |
| Reference Transcript ID | HORVU.MOREX.r3.2HG0179920.1 |
| Gene ID | HORVU.MOREX.r3.2HG0179920 |
| Gene Name | NA |
| Transcript ID | HORVU.MOREX.r3.2HG0179920.1 |
| Protein ID | |
| Gene ID | HORVU.MOREX.r3.2HG0179920 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 1.40E-10 |
| Motif start | 274 |
| Motif end | 331 |
| Protein seq | >HORVU.MOREX.r3.2HG0179920.1 MASANNWLGFSLSGQGNHPQPHQNGSPAAAAIDVSGAGDFYGLQAQTAPDAHLGMSGLRADANYGVMDAFNGGNQETQDW AMRGLDYHGGSSELSMLVGSSGGRMTVDDGEAPKLEDFLGGNSFSDVQDHAGSYLFSSGSAMGSGAAAGSHGVQGRGGST IELSMIKTWLRNDNNQAQHDQEMSADASATSYACSGAPGSTGNGVGVANSRGQGLALSMSMGSNSHPQMPVVPAAVGTES TSSENKRVDSPSAGTADAVQRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGKQVYLGGYDKEDKAAR AYDLAALKYWGTTTTTNIPISTYEKEIEEMKHMTRQEYIAYLRRNSSGFSRGASKYRGVTRHHQQGRWQARIGRVAGNKD LYLGTFTTEEEAAEAYDIAAIKFRGLNAVTNFEMSRYDVKSILEGSTLPVGGAARRLKEAAELAEAGVWRAEDGSIVSHL QADAMAGYHHGWPTSIAFGSHQQQQSAAQLALHYPYGVGGQARGWCKPEQDAVIEAAHGGQDLQELHLGSGGSTHNFFQP ASRTAVYGNGGGGAWYQGLGGNAYMMPVGTVVDADQGHSGSTATTEEGRLVGYGAEAGVDPYAAMRRAYELSQGSSSVSV AKVADGYSNNWSSPFNGMG* |
| CDS seq | >HORVU.MOREX.r3.2HG0179920.1 ATGGCTTCGGCGAACAACTGGCTGGGCTTCTCGCTCTCCGGCCAAGGGAACCACCCACAGCCCCACCAGAATGGCTCACC GGCCGCCGCGGCCATTGACGTCTCCGGTGCAGGCGACTTCTATGGCCTGCAAGCCCAGACGGCGCCGGATGCGCACCTTG GCATGTCTGGCCTCAGGGCCGACGCCAACTACGGCGTCATGGATGCCTTCAACGGAGGCAACCAAGAAACCCAAGATTGG GCAATGAGGGGTTTGGACTACCACGGCGGCTCCTCCGAGCTGTCGATGCTAGTCGGCTCGAGCGGCGGGAGGATGACGGT GGACGACGGCGAGGCGCCGAAGCTCGAGGACTTCCTCGGCGGCAACTCCTTCTCCGACGTGCAGGACCACGCCGGCAGCT ACCTGTTCTCGTCAGGGAGCGCGATGGGCAGCGGAGCCGCTGCTGGTTCGCACGGCGTCCAAGGCCGTGGCGGCAGCACC ATAGAACTGTCCATGATCAAGACATGGCTCCGGAACGACAATAACCAGGCGCAGCATGACCAGGAGATGAGCGCCGACGC GAGCGCGACCAGCTATGCGTGCTCCGGCGCGCCAGGGAGCACCGGCAACGGCGTGGGCGTGGCGAACTCGCGTGGGCAGG GCCTAGCGCTCTCGATGAGCATGGGGTCGAACTCGCACCCGCAGATGCCAGTGGTCCCGGCTGCGGTGGGGACGGAGAGC ACGTCATCAGAGAACAAGCGGGTGGATTCGCCGAGCGCCGGCACGGCGGACGCCGTCCAGAGGAAATCCATCGACACCTT CGGGCAAAGGACCTCGATCTACAGAGGTGTAACAAGGCATAGATGGACAGGGCGGTACGAGGCGCATCTGTGGGACAATA GTTGCAGGAGAGAGGGGCAAACTCGCAAGGGGAAACAAGTTTATCTGGGCGGTTATGACAAAGAAGACAAGGCAGCTAGG GCTTATGATTTGGCAGCTCTAAAATATTGGGGCACAACCACAACAACAAATATCCCAATAAGTACTTACGAGAAGGAGAT AGAAGAAATGAAACACATGACTAGGCAGGAGTACATTGCGTATCTTAGGAGGAATAGCAGTGGTTTTTCTCGTGGCGCGT CAAAATACCGCGGTGTAACCAGGCATCATCAGCAAGGAAGATGGCAAGCAAGGATAGGGAGAGTCGCGGGCAACAAGGAT CTCTACCTCGGCACCTTCACGACCGAGGAGGAGGCCGCGGAGGCGTACGACATCGCCGCCATCAAGTTCCGCGGCCTCAA CGCCGTCACCAACTTCGAGATGAGCCGCTACGACGTCAAGAGCATTCTGGAGGGCAGCACGCTGCCGGTCGGCGGAGCGG CCAGGCGCCTCAAGGAGGCGGCCGAGCTCGCCGAGGCCGGCGTGTGGCGGGCGGAGGACGGCAGCATCGTCTCGCACCTG CAGGCCGACGCCATGGCGGGCTACCACCACGGCTGGCCCACGTCCATCGCTTTCGGCAGCCACCAGCAGCAGCAGTCCGC GGCGCAGCTCGCCCTGCACTACCCGTACGGCGTTGGCGGGCAGGCCCGCGGATGGTGTAAGCCGGAGCAGGACGCGGTGA TCGAGGCCGCGCACGGCGGGCAGGACCTCCAGGAGCTGCACCTGGGAAGCGGCGGCAGCACCCACAACTTCTTCCAGCCG GCGTCAAGGACAGCGGTCTACGGCAACGGCGGGGGCGGCGCCTGGTACCAAGGCCTCGGCGGCAACGCGTACATGATGCC GGTGGGCACGGTGGTGGACGCCGACCAGGGACACAGCGGCAGCACGGCAACTACGGAGGAGGGGAGGCTCGTGGGCTACG GCGCCGAGGCTGGCGTCGACCCGTACGCGGCCATGAGGCGCGCCTACGAGCTGTCCCAGGGCTCGTCGTCCGTGAGCGTC GCCAAGGTGGCGGACGGCTACTCCAACAACTGGAGCTCGCCGTTCAATGGCATGGGGTGA |
Hv_2H:550367554-550367562:+ does not have available information here.