| Microexon ID | Hv_1H:390381289-390381297:- |
| Species | Hordeum Vulgare | Coordinates | 1H:390381289..390381297 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TATATTTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAAAAGCACATGGAATCAGAATCAGAATAAAAAAGGGAAACAAGTATATTTAGGCGCATATGATGATGAAGAGGCTGCGGCAAGAGCCTATGATCTTGCTGCA |
| Microexon-tag Amino Acid Seq | WDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAA |
| Microexon-tag spanning region | 390381148-390382263 |
| Microexon-tag prediction score | 0.9636 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | HORVU.MOREX.r3.1HG0058550.1x |
| Reference Transcript ID | HORVU.MOREX.r3.1HG0058550.1 |
| Gene ID | HORVU.MOREX.r3.1HG0058550 |
| Gene Name | NA |
| Transcript ID | HORVU.MOREX.r3.1HG0058550.1 |
| Protein ID | |
| Gene ID | HORVU.MOREX.r3.1HG0058550 |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 6.50E-12 |
| Motif start | 78 |
| Motif end | 135 |
| Protein seq | >HORVU.MOREX.r3.1HG0058550.1 MASPNPAAADAGLQNKLEAAAGGSEGPPPAYGAAVGVAAAEQAPPRRLAPARKERVCTAKDRISRMTPCAAGKRSSIYRG VTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGAGTQINFPVSDYTRDLEEMQMISKE DYLVSLRRKSSAFSRGLPKYRGLPRQLHNSRWDASLGQLLGNDYMNLSCGKGIALDGKFAGSFGLERKIDLTNYIRWWVP KKARQSDTSKAEEVADEIRAIEGSVQLTEPYKLPSLGLGSHSKPSSAGLSACGILSQSGAFKSFLEKSTKLSEECTFSKE IDEGKVAVSEPTTGHHTSAVDINMNGLLVQRAPYTLAPVMPTMKSTWSPSDPSADHLFWSNFILPSSQPVTMATITTTTF AKNEVSSSDPFKNQEYEHTK* |
| CDS seq | >HORVU.MOREX.r3.1HG0058550.1 ATGGCCTCCCCCAACCCCGCCGCGGCCGACGCGGGGCTGCAGAACAAGCTGGAGGCCGCGGCGGGGGGAAGCGAGGGGCC GCCGCCCGCGTACGGCGCGGCGGTGGGGGTGGCCGCCGCGGAGCAGGCGCCGCCCAGGAGGCTCGCCCCGGCGCGGAAGG AGCGCGTCTGCACCGCCAAGGACCGCATCAGCCGCATGACGCCCTGCGCCGCCGGGAAACGCAGCTCCATCTACCGCGGG GTCACCCGGCATAGATGGACAGGGCGATATGAGGCTCACCTTTGGGACAAAAGCACATGGAATCAGAATCAGAATAAAAA AGGGAAACAAGTATATTTAGGCGCATATGATGATGAAGAGGCTGCGGCAAGAGCCTATGATCTTGCTGCATTGAAATACT GGGGAGCTGGAACACAGATAAATTTTCCTGTCTCCGATTATACAAGAGATCTTGAAGAGATGCAGATGATCTCCAAAGAG GACTATCTTGTATCTCTCCGAAGAAAGAGCAGTGCCTTCTCTAGGGGATTACCAAAATATCGTGGGCTTCCCAGGCAGCT CCATAATTCCAGATGGGATGCTTCTTTGGGACAACTGCTTGGCAATGACTACATGAACCTCAGTTGTGGAAAGGGCATTG CACTGGATGGAAAATTTGCGGGAAGCTTTGGGTTAGAGAGGAAAATTGATCTAACAAATTACATTAGGTGGTGGGTACCC AAAAAGGCACGGCAGTCAGATACATCAAAAGCAGAAGAGGTTGCTGATGAAATCCGTGCTATTGAAGGTTCAGTGCAACT GACTGAGCCGTATAAGCTGCCTTCTCTTGGCCTCGGTTCCCATTCAAAACCCTCTTCAGCGGGGCTATCTGCATGCGGTA TCTTATCTCAGTCTGGTGCCTTCAAAAGCTTCTTGGAGAAGTCCACAAAATTATCTGAAGAATGCACATTTAGCAAAGAA ATAGATGAAGGAAAGGTCGCTGTATCAGAACCTACTACTGGACATCATACATCTGCAGTTGACATTAACATGAATGGGTT GCTAGTACAAAGAGCTCCATACACATTGGCCCCTGTTATGCCTACAATGAAAAGTACCTGGAGTCCTTCTGATCCTTCTG CGGATCATCTATTTTGGAGCAACTTCATCTTGCCATCGAGTCAACCTGTCACAATGGCGACAATAACGACAACAACGTTT GCAAAGAATGAGGTGAGTTCAAGTGATCCATTCAAGAACCAGGAGTATGAACATACCAAATAG |
Hv_1H:390381289-390381297:- does not have available information here.