
Microexon ID | Ha_9:45365022-45365030:+ |
Species | Helianthus annuus | Coordinates | 9:45365022..45365030 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGCAGAAGAGAAGGGCAAAGTAGGAAAGGAAGACAAGTTTACTTGGGTGGATACGACAAAGAAGACAAAGCAGCTCGAGCTTATGATCTTGCAGCT |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA |
Microexon-tag spanning region | 45364639-45365441 |
Microexon-tag prediction score | 0.9791 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG13977x |
Reference Transcript ID | OTG13977 |
Gene ID | HannXRQ_Chr09g0244261 |
Gene Name | NA |
Transcript ID | OTG13977 |
Protein ID | OTG13977 |
Gene ID | HannXRQ_Chr09g0244261 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 2.8e-12 |
Motif start | 134 |
Motif end | 192 |
Protein seq | >OTG13977 MNMNPSDQPINLQDHNNWLTFSLSNTTTTILQPPHAAALHHHHHHDADVTPKLEDFLGGSSGSGHDVCQFSDESQQPHDT TSIYDSELKTIATSFLHGFSSDNQQQLAVTPAPPQQENSPVRKAVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREG QSRKGRQVYLGGYDKEDKAARAYDLAALKYWGLTTTTNFPVCNYQKEIEEMKNMTRQEFVASLRRKSSGFSRGASIYRGV TRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVNSIANKNLPIGGMCSKSKTS MDQTVSDNNQISLNQDLATTSEQPHSNILSFALPVKQDPCPDYWNAVFGYTQSNSYQCTSTMPYVMEYPSSTTNNGYYNS EVIQQENDNGTTVALSTESAIPMGTPVGLNGSSYGSWIEQSFHSNPPAKQNLSVFQTPIFGME* |
CDS seq | >OTG13977 ATGAACATGAATCCTTCTGATCAACCCATTAATCTCCAGGATCACAACAACTGGCTCACCTTCTCTCTCTCCAACACCAC CACCACCATCTTACAACCACCACACGCCGCCGCCTTACACCACCACCACCACCATGATGCAGATGTTACTCCAAAACTGG AAGACTTTCTCGGCGGCTCTAGCGGATCTGGTCATGATGTGTGTCAGTTTTCAGATGAATCTCAGCAACCCCATGACACA ACATCAATATATGATTCTGAGTTGAAGACAATAGCGACTAGTTTTCTTCATGGGTTCTCATCGGACAACCAGCAGCAACT GGCGGTGACACCGGCGCCGCCACAGCAAGAAAACTCTCCGGTGAGAAAGGCTGTTGATACCTTTGGCCAACGTACTTCTA TTTACCGTGGTGTTACAAGGCATAGATGGACGGGGAGATATGAAGCTCATTTATGGGATAATAGTTGCAGAAGAGAAGGG CAAAGTAGGAAAGGAAGACAAGTTTACTTGGGTGGATACGACAAAGAAGACAAAGCAGCTCGAGCTTATGATCTTGCAGC TCTTAAGTACTGGGGTCTGACCACCACGACAAATTTTCCGGTTTGCAACTACCAGAAAGAGATTGAAGAAATGAAGAACA TGACTAGGCAAGAATTTGTTGCTTCACTTAGAAGGAAAAGCAGTGGGTTTTCTAGAGGAGCCTCCATTTATAGGGGTGTC ACAAGGCACCATCAACATGGACGTTGGCAAGCGAGAATAGGACGAGTAGCCGGAAACAAAGATCTCTACCTCGGAACCTT TAGCACACAAGAAGAAGCAGCGGAGGCATACGACATTGCAGCCATCAAATTCCGAGGGTTAAACGCGGTCACAAATTTCG ACATGAGCCGATACGACGTGAACAGCATCGCCAACAAAAACCTCCCAATCGGTGGCATGTGTAGCAAATCCAAAACCTCA ATGGATCAGACTGTGTCCGACAACAACCAAATATCCCTCAACCAAGATCTCGCCACAACTTCCGAACAACCACACTCGAA CATCCTTAGCTTCGCCTTGCCCGTGAAACAAGACCCGTGCCCGGATTACTGGAATGCGGTCTTCGGGTACACTCAAAGCA ATAGCTATCAATGTACAAGTACAATGCCATACGTCATGGAATACCCTTCAAGTACAACCAACAATGGGTACTACAATAGT GAGGTGATTCAACAAGAGAATGATAATGGTACTACTGTTGCTTTAAGTACTGAATCAGCAATTCCAATGGGTACCCCTGT AGGTTTGAATGGATCTAGTTATGGAAGCTGGATAGAACAGTCTTTTCACTCAAATCCACCAGCCAAGCAAAATCTCTCTG TTTTTCAGACACCCATTTTTGGAATGGAATGA |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGCAGAAGAGAAGGGCAAAGTAGGAAAGGAAGACAAGTTTACTTGGGTGGATACGACAAAGAAGACAAAGCAGCTCGAGCTTATGATCTTGCAGCT |
Microexon-tag Amino Acid seq | WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA |
Transcript ID | OTG13977 |
Gene ID | Ha.55155 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 2.8e-12 |
Motif start | 134 |
Motif end | 192 |
Protein seq | >OTG13977 MNMNPSDQPINLQDHNNWLTFSLSNTTTTILQPPHAAALHHHHHHDADVTPKLEDFLGGSSGSGHDVCQFSDESQQPHDT TSIYDSELKTIATSFLHGFSSDNQQQLAVTPAPPQQENSPVRKAVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREG QSRKGRQVYLGGYDKEDKAARAYDLAALKYWGLTTTTNFPVCNYQKEIEEMKNMTRQEFVASLRRKSSGFSRGASIYRGV TRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVNSIANKNLPIGGMCSKSKTS MDQTVSDNNQISLNQDLATTSEQPHSNILSFALPVKQDPCPDYWNAVFGYTQSNSYQCTSTMPYVMEYPSSTTNNGYYNS EVIQQENDNGTTVALSTESAIPMGTPVGLNGSSYGSWIEQSFHSNPPAKQNLSVFQTPIFGME* |
CDS seq | >OTG13977 ATGAACATGAATCCTTCTGATCAACCCATTAATCTCCAGGATCACAACAACTGGCTCACCTTCTCTCTCTCCAACACCAC CACCACCATCTTACAACCACCACACGCCGCCGCCTTACACCACCACCACCACCATGATGCAGATGTTACTCCAAAACTGG AAGACTTTCTCGGCGGCTCTAGCGGATCTGGTCATGATGTGTGTCAGTTTTCAGATGAATCTCAGCAACCCCATGACACA ACATCAATATATGATTCTGAGTTGAAGACAATAGCGACTAGTTTTCTTCATGGGTTCTCATCGGACAACCAGCAGCAACT GGCGGTGACACCGGCGCCGCCACAGCAAGAAAACTCTCCGGTGAGAAAGGCTGTTGATACCTTTGGCCAACGTACTTCTA TTTACCGTGGTGTTACAAGGCATAGATGGACGGGGAGATATGAAGCTCATTTATGGGATAATAGTTGCAGAAGAGAAGGG CAAAGTAGGAAAGGAAGACAAGTTTACTTGGGTGGATACGACAAAGAAGACAAAGCAGCTCGAGCTTATGATCTTGCAGC TCTTAAGTACTGGGGTCTGACCACCACGACAAATTTTCCGGTTTGCAACTACCAGAAAGAGATTGAAGAAATGAAGAACA TGACTAGGCAAGAATTTGTTGCTTCACTTAGAAGGAAAAGCAGTGGGTTTTCTAGAGGAGCCTCCATTTATAGGGGTGTC ACAAGGCACCATCAACATGGACGTTGGCAAGCGAGAATAGGACGAGTAGCCGGAAACAAAGATCTCTACCTCGGAACCTT TAGCACACAAGAAGAAGCAGCGGAGGCATACGACATTGCAGCCATCAAATTCCGAGGGTTAAACGCGGTCACAAATTTCG ACATGAGCCGATACGACGTGAACAGCATCGCCAACAAAAACCTCCCAATCGGTGGCATGTGTAGCAAATCCAAAACCTCA ATGGATCAGACTGTGTCCGACAACAACCAAATATCCCTCAACCAAGATCTCGCCACAACTTCCGAACAACCACACTCGAA CATCCTTAGCTTCGCCTTGCCCGTGAAACAAGACCCGTGCCCGGATTACTGGAATGCGGTCTTCGGGTACACTCAAAGCA ATAGCTATCAATGTACAAGTACAATGCCATACGTCATGGAATACCCTTCAAGTACAACCAACAATGGGTACTACAATAGT GAGGTGATTCAACAAGAGAATGATAATGGTACTACTGTTGCTTTAAGTACTGAATCAGCAATTCCAATGGGTACCCCTGT AGGTTTGAATGGATCTAGTTATGGAAGCTGGATAGAACAGTCTTTTCACTCAAATCCACCAGCCAAGCAAAATCTCTCTG TTTTTCAGACACCCATTTTTGGAATGGAATGA |