
Microexon ID | Ha_9:201749325-201749333:+ |
Species | Helianthus annuus | Coordinates | 9:201749325..201749333 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TATATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAGAATTGCTGGAATGAATCACAAAACAAAAAAGGACGACAAGTATATTTAGGGGCTTACGACGATGAGAAAGCCGCTGCACATGCATATGACTTGGCAGCA |
Microexon-tag Amino Acid Seq | WDKNCWNESQNKKGRQVYLGAYDDEKAAAHAYDLAA |
Microexon-tag spanning region | 201749129-201749539 |
Microexon-tag prediction score | 0.9536 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG16694x |
Reference Transcript ID | OTG16694 |
Gene ID | HannXRQ_Chr09g0274201 |
Gene Name | NA |
Transcript ID | OTG16694 |
Protein ID | OTG16694 |
Gene ID | HannXRQ_Chr09g0274201 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 3e-12 |
Motif start | 37 |
Motif end | 95 |
Protein seq | >OTG16694 MAKKKNASLSETKPVIVKPKRTRKTVQRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAYDDEK AAAHAYDLAALKYWGQDTILNFPLGTYKDKLQEMESLSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVF GNKYLYLGTFATQEEAATAYDLAAIQYRGINAVTNFDLSRYINNHKTDSNNNSNSNGIQTNFGANVSQDPELSSCYNNES SSSGETTTSVLRGSSALGLLLQSTKYKEMLERNSPNDSSSPTMESDLPRRSFPDDIQTYFDCHESSSYAEGEDSIFADLT APMLFQSELDA* |
CDS seq | >OTG16694 ATGGCGAAGAAGAAGAATGCGTCATTAAGTGAAACTAAACCGGTTATTGTTAAACCTAAGAGAACACGTAAAACGGTTCA GAGAGATTCGCCCCCACAACGCAGCTCCATCTACAGGGGCGTCACCAGGCATCGATGGACCGGTCGATATGAAGCTCATT TATGGGATAAGAATTGCTGGAATGAATCACAAAACAAAAAAGGACGACAAGTATATTTAGGGGCTTACGACGATGAGAAA GCCGCTGCACATGCATATGACTTGGCAGCATTGAAGTATTGGGGACAAGACACCATACTCAATTTTCCTCTTGGAACATA CAAAGACAAGCTTCAAGAAATGGAAAGTTTGTCAAAAGAGGAGTATATCGGATCTCTAAGAAGAAAAAGTAGCGGATTTT CGCGAGGAGTTTCGAAATATAGAGGTGTAGCAAGGCATCATCATAATGGTAGGTGGGAGGCTCGTATAGGACGTGTTTTC GGCAATAAATATCTTTATCTTGGAACATTCGCTACTCAAGAAGAAGCTGCCACAGCATATGACCTGGCAGCAATACAGTA CCGAGGAATTAACGCCGTTACAAACTTTGACCTCAGCCGTTATATCAACAACCACAAAACAGATTCCAACAACAATTCAA ATTCAAACGGTATTCAAACCAACTTTGGCGCCAACGTTAGTCAAGATCCAGAATTAAGCTCCTGTTACAACAACGAAAGT TCAAGCTCCGGCGAAACAACCACCAGCGTACTACGCGGTTCTTCCGCCTTAGGGTTACTATTGCAGTCAACAAAATATAA GGAAATGCTTGAGAGGAACTCGCCGAATGATTCATCGTCGCCAACGATGGAGTCAGATCTGCCGCGGCGGAGCTTTCCTG ATGACATACAGACGTATTTCGACTGTCATGAATCGAGTAGCTATGCGGAGGGCGAAGATAGTATTTTTGCTGATTTAACG GCGCCTATGTTGTTCCAGTCTGAGCTTGATGCTTAA |
Microexon DNA seq | TATATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAGAATTGCTGGAATGAATCACAAAACAAAAAAGGACGACAAGTATATTTAGGGGCTTACGACGATGAGAAAGCCGCTGCACATGCATATGACTTGGCAGCA |
Microexon-tag Amino Acid seq | WDKNCWNESQNKKGRQVYLGAYDDEKAAAHAYDLAA |
Transcript ID | OTG16694 |
Gene ID | Ha.58329 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 3e-12 |
Motif start | 37 |
Motif end | 95 |
Protein seq | >OTG16694 MAKKKNASLSETKPVIVKPKRTRKTVQRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAYDDEK AAAHAYDLAALKYWGQDTILNFPLGTYKDKLQEMESLSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVF GNKYLYLGTFATQEEAATAYDLAAIQYRGINAVTNFDLSRYINNHKTDSNNNSNSNGIQTNFGANVSQDPELSSCYNNES SSSGETTTSVLRGSSALGLLLQSTKYKEMLERNSPNDSSSPTMESDLPRRSFPDDIQTYFDCHESSSYAEGEDSIFADLT APMLFQSELDA* |
CDS seq | >OTG16694 ATGGCGAAGAAGAAGAATGCGTCATTAAGTGAAACTAAACCGGTTATTGTTAAACCTAAGAGAACACGTAAAACGGTTCA GAGAGATTCGCCCCCACAACGCAGCTCCATCTACAGGGGCGTCACCAGGCATCGATGGACCGGTCGATATGAAGCTCATT TATGGGATAAGAATTGCTGGAATGAATCACAAAACAAAAAAGGACGACAAGTATATTTAGGGGCTTACGACGATGAGAAA GCCGCTGCACATGCATATGACTTGGCAGCATTGAAGTATTGGGGACAAGACACCATACTCAATTTTCCTCTTGGAACATA CAAAGACAAGCTTCAAGAAATGGAAAGTTTGTCAAAAGAGGAGTATATCGGATCTCTAAGAAGAAAAAGTAGCGGATTTT CGCGAGGAGTTTCGAAATATAGAGGTGTAGCAAGGCATCATCATAATGGTAGGTGGGAGGCTCGTATAGGACGTGTTTTC GGCAATAAATATCTTTATCTTGGAACATTCGCTACTCAAGAAGAAGCTGCCACAGCATATGACCTGGCAGCAATACAGTA CCGAGGAATTAACGCCGTTACAAACTTTGACCTCAGCCGTTATATCAACAACCACAAAACAGATTCCAACAACAATTCAA ATTCAAACGGTATTCAAACCAACTTTGGCGCCAACGTTAGTCAAGATCCAGAATTAAGCTCCTGTTACAACAACGAAAGT TCAAGCTCCGGCGAAACAACCACCAGCGTACTACGCGGTTCTTCCGCCTTAGGGTTACTATTGCAGTCAACAAAATATAA GGAAATGCTTGAGAGGAACTCGCCGAATGATTCATCGTCGCCAACGATGGAGTCAGATCTGCCGCGGCGGAGCTTTCCTG ATGACATACAGACGTATTTCGACTGTCATGAATCGAGTAGCTATGCGGAGGGCGAAGATAGTATTTTTGCTGATTTAACG GCGCCTATGTTGTTCCAGTCTGAGCTTGATGCTTAA |