| Microexon ID | Ha_9:173043927-173043935:- |
| Species | Helianthus annuus | Coordinates | 9:173043927..173043935 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATCTTG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAAACTTTCTTGGAATGCTACACAGAAAAAGAAAGGAAAACAAGTTTATCTTGGAGCTTATGATGAAGAAGAATCAGCCGCAAGAGCATACGATCTAGCTGCA |
| Microexon-tag Amino Acid Seq | WDKLSWNATQKKKGKQVYLGAYDEEESAARAYDLAA |
| Microexon-tag spanning region | 173043777-173044127 |
| Microexon-tag prediction score | 0.9394 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | OTG15902x |
| Reference Transcript ID | OTG15902 |
| Gene ID | HannXRQ_Chr09g0265501 |
| Gene Name | NA |
| Transcript ID | OTG15902 |
| Protein ID | OTG15902 |
| Gene ID | HannXRQ_Chr09g0265501 |
| Gene Name | NA |
| Pfam domain motif | AP2 |
| Motif E-value | 4.5e-14 |
| Motif start | 64 |
| Motif end | 123 |
| Protein seq | >OTG15902 MAMMAIKSEENYRKRSIAIVNHETPEVRRVKRRRRDAAALTLDCKSEPTQQTGQASPTTVNRSSKFRGVSRHRWTGRYEA HLWDKLSWNATQKKKGKQVYLGAYDEEESAARAYDLAALKYWGPTTFTNFPVSEYEKEIEIMQNLTKEEYLASLRRKSSG FSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYKGLNAVTNFELSNYITWLNPGTQTR STNHEQQTTIESNVMPSNNYSWYEEPQSPFLEEQKPSETKLPFTSSKRSSPTAVDLLLRSSMFRELVEKNLHSTDDDEEE DMKTQVMRPCYGNEDGLMFLDSSNANDVQLQDEFDLNYDFQGSTYAFGLSPLVDTS* |
| CDS seq | >OTG15902 ATGGCAATGATGGCAATTAAGAGCGAAGAGAACTACAGAAAGCGATCCATTGCCATAGTTAACCACGAGACCCCAGAAGT AAGGCGCGTTAAAAGAAGGCGAAGAGACGCAGCAGCACTTACACTGGACTGCAAAAGCGAGCCAACTCAGCAAACGGGTC AAGCTTCGCCAACGACTGTAAACAGAAGTTCTAAGTTTCGCGGTGTGAGCAGACATAGGTGGACAGGGAGATATGAAGCA CACTTATGGGACAAACTTTCTTGGAATGCTACACAGAAAAAGAAAGGAAAACAAGTTTATCTTGGAGCTTATGATGAAGA AGAATCAGCCGCAAGAGCATACGATCTAGCTGCACTCAAGTATTGGGGACCAACTACTTTTACAAATTTCCCAGTATCTG AGTATGAGAAAGAGATTGAAATAATGCAGAATTTGACAAAGGAAGAATACTTGGCTTCATTAAGGAGGAAGAGTAGTGGA TTTTCAAGAGGGGTGTCAAAGTACAGGGGTGTTGCAAGGCACCATCATAATGGGAGATGGGAAGCGAGAATCGGGCGAGT TTTTGGAAACAAATACTTATATCTCGGAACCTATAGCACACAAGAAGAGGCTGCACGCGCTTATGATATTGCAGCAATCG AGTACAAAGGACTAAACGCTGTGACCAACTTTGAGTTGAGTAATTACATAACATGGTTGAATCCTGGTACACAAACTCGA TCCACAAACCATGAACAACAAACAACCATCGAATCAAATGTTATGCCGTCAAATAACTACAGTTGGTACGAGGAGCCACA GTCTCCATTTCTGGAAGAACAAAAACCATCTGAAACTAAATTACCATTTACTTCAAGCAAAAGATCTTCACCAACAGCAG TCGACTTGCTACTTAGATCATCTATGTTTAGAGAACTTGTGGAGAAGAATTTACATTCGACTGACGACGACGAGGAAGAA GACATGAAGACACAAGTGATGAGACCTTGTTATGGAAATGAAGATGGTCTCATGTTTCTGGATTCCTCAAATGCGAACGA TGTACAGTTGCAGGACGAGTTCGATTTAAACTACGATTTTCAAGGATCAACATACGCGTTTGGATTGTCTCCACTTGTTG ACACAAGTTGA |
Ha_9:173043927-173043935:- does not have available information here.