
Microexon ID | Ha_4:1392121-1392129:+ |
Species | Helianthus annuus | Coordinates | 4:1392121..1392129 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGTAGGAAAGAAGGGCAGACAAGAAAGGGTCGTCAAGTTTATCTTGGGGGATATGATAATGAAGAGAAAGCTGCAAGAGCTTATGACTTGGCTGCT |
Microexon-tag Amino Acid Seq | WDNSCRKEGQTRKGRQVYLGGYDNEEKAARAYDLAA |
Microexon-tag spanning region | 1391932-1393196 |
Microexon-tag prediction score | 0.9738 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG26938x |
Reference Transcript ID | OTG26938 |
Gene ID | HannXRQ_Chr04g0094581 |
Gene Name | NA |
Transcript ID | OTG26938 |
Protein ID | OTG26938 |
Gene ID | HannXRQ_Chr04g0094581 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 6.8e-13 |
Motif start | 217 |
Motif end | 276 |
Protein seq | >OTG26938 MSDWLGFSLNHHHPQQDPINPPALHQHDPDSVIPINDFNPSTQTQRWRLEATDQSGPKLEDFLGGGACAGAGADVNLNFH EYRPTEGDIVPRDGAACYISPPPAPPYLLHYGYPYYTTTSTSTTLTAANQNEQQNGVVSYDDGASAITQVSEIKTWLLPS SSSTGCDVSDRQECLSLAVVPAGDNRKRSVVQMKSDKSGKGEVVTRKAVDGFGQRTSRFRGVTRHRWTGRYEAHLWDNSC RKEGQTRKGRQVYLGGYDNEEKAARAYDLAALKYWGPTTHINFPLADYEKELEEMKNMNRQEFVANLRRKSSGFSRGASM YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGELAK RSPRDTGPTMLLENCSHDPGDDFADMVWAGNQEEPPGLEDQQGASNIENMSPSELAGDLDPGVG* |
CDS seq | >OTG26938 ATGAGCGATTGGCTGGGCTTCTCCCTTAACCACCACCACCCCCAACAAGACCCCATTAATCCACCTGCACTTCATCAACA TGACCCTGATTCCGTTATTCCTATCAACGATTTCAATCCTTCCACTCAAACACAACGATGGAGATTAGAAGCCACCGACC AAAGTGGTCCGAAGCTCGAAGATTTTTTGGGCGGCGGTGCTTGTGCTGGTGCTGGTGCTGACGTCAACCTTAACTTTCAC GAATATCGTCCGACAGAAGGTGATATTGTTCCTAGAGACGGCGCCGCCTGCTATATATCACCACCGCCGGCGCCGCCATA TTTGTTACACTACGGTTATCCTTACTACACCACCACCAGCACCAGCACAACCCTCACCGCCGCAAACCAAAACGAACAAC AAAACGGTGTCGTTTCATACGACGACGGTGCAAGTGCAATCACTCAGGTTTCCGAGATCAAAACGTGGTTACTGCCATCG TCATCATCGACGGGGTGTGACGTCAGCGACCGTCAGGAGTGTTTGTCGCTGGCGGTGGTGCCTGCGGGTGATAATAGGAA GCGGTCGGTGGTGCAGATGAAGTCGGATAAAAGCGGGAAAGGAGAAGTGGTTACGCGTAAAGCGGTGGATGGTTTCGGGC AAAGGACTTCACGGTTTCGGGGCGTGACGAGGCACCGGTGGACGGGGAGATATGAAGCTCATTTGTGGGATAATAGTTGT AGGAAAGAAGGGCAGACAAGAAAGGGTCGTCAAGTTTATCTTGGGGGATATGATAATGAAGAGAAAGCTGCAAGAGCTTA TGACTTGGCTGCTCTTAAATACTGGGGTCCAACAACTCATATTAATTTCCCTCTAGCCGACTACGAAAAAGAACTCGAGG AGATGAAAAACATGAACAGGCAAGAATTTGTAGCCAACTTAAGAAGGAAAAGCAGCGGGTTTTCAAGAGGGGCATCTATG TATAGAGGAGTCACAAGGCATCATCAACATGGAAGGTGGCAAGCTAGAATAGGAAGAGTTGCAGGCAATAAGGACTTGTA CCTTGGTACCTTTAGTACACAAGAGGAAGCGGCGGAAGCTTACGACATAGCAGCCATAAAATTCCGAGGGACAAGTGCAG TGACCAACTTCGACATTAGCCGATACGACGTCAAAAGAATATGTTCAAGTTCCACTTTGATAGCCGGCGAGCTGGCAAAA CGGTCTCCACGAGATACAGGCCCCACAATGCTGCTCGAAAACTGTAGTCATGACCCGGGTGATGATTTCGCTGACATGGT ATGGGCTGGAAACCAGGAGGAGCCGCCTGGACTCGAAGACCAACAAGGTGCAAGTAATATCGAGAACATGAGCCCGAGTG AGTTAGCCGGTGATCTTGACCCAGGGGTTGGATGA |
Microexon DNA seq | TTTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGTAGGAAAGAAGGGCAGACAAGAAAGGGTCGTCAAGTTTATCTTGGGGGATATGATAATGAAGAGAAAGCTGCAAGAGCTTATGACTTGGCTGCT |
Microexon-tag Amino Acid seq | WDNSCRKEGQTRKGRQVYLGGYDNEEKAARAYDLAA |
Transcript ID | Ha.39638.1 |
Gene ID | Ha.39638 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 6.8e-13 |
Motif start | 218 |
Motif end | 277 |
Protein seq | >Ha.39638.1 MSDWLGFSLNHHHPQQDPINPPALHQHDPDSVIPINDFNPSTQTQLGWRLEATDQSGPKLEDFLGGGACAGAGADVNLNF HEYRPTEGDIVPRDGAACYISPPPAPPYLLHYGYPYYTTTSTSTTLTAANQNEQQNGVVSYDDGASAITQVSEIKTWLLP SSSSTGCDVSDRQECLSLAVVPAGDNRKRSVVQMKSDKSGKGEVVTRKAVDGFGQRTSRFRGVTRHRWTGRYEAHLWDNS CRKEGQTRKGRQVYLGGYDNEEKAARAYDLAALKYWGPTTHINFPLADYEKELEEMKNMNRQEFVANLRRKSSGFSRGAS MYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGELA KRSPRDTGPTMLLENCSHDPGDDFADMVWAGNQEEPPGLEDQQGASNIENMSPSELAGDLDPGVG* |
CDS seq | >Ha.39638.1 ATGAGCGATTGGCTGGGCTTCTCCCTTAACCACCACCACCCCCAACAAGACCCCATTAATCCACCTGCACTTCATCAACA TGACCCTGATTCCGTTATTCCTATCAACGATTTCAATCCTTCCACTCAAACACAACTAGGATGGAGATTAGAAGCCACCG ACCAAAGTGGTCCGAAGCTCGAAGATTTTTTGGGCGGCGGTGCTTGTGCTGGTGCTGGTGCTGACGTCAACCTTAACTTT CACGAATATCGTCCGACAGAAGGTGATATTGTTCCTAGAGACGGCGCCGCCTGCTATATATCACCACCGCCGGCGCCGCC ATATTTGTTACACTACGGTTATCCTTACTACACCACCACCAGCACCAGCACAACCCTCACCGCCGCAAACCAAAACGAAC AACAAAACGGTGTCGTTTCATACGACGACGGTGCAAGTGCAATCACTCAGGTTTCCGAGATCAAAACGTGGTTACTGCCA TCGTCATCATCGACGGGGTGTGACGTCAGCGACCGTCAGGAGTGTTTGTCGCTGGCGGTGGTGCCTGCGGGTGATAATAG GAAGCGGTCGGTGGTGCAGATGAAGTCGGATAAAAGCGGGAAAGGAGAAGTGGTTACGCGTAAAGCGGTGGATGGTTTCG GGCAAAGGACTTCACGGTTTCGGGGCGTGACGAGGCACCGGTGGACGGGGAGATATGAAGCTCATTTGTGGGATAATAGT TGTAGGAAAGAAGGGCAGACAAGAAAGGGTCGTCAAGTTTATCTTGGGGGATATGATAATGAAGAGAAAGCTGCAAGAGC TTATGACTTGGCTGCTCTTAAATACTGGGGTCCAACAACTCATATTAATTTCCCTCTAGCCGACTACGAAAAAGAACTCG AGGAGATGAAAAACATGAACAGGCAAGAATTTGTAGCCAACTTAAGAAGGAAAAGCAGCGGGTTTTCAAGAGGGGCATCT ATGTATAGAGGAGTCACAAGGCATCATCAACATGGAAGGTGGCAAGCTAGAATAGGAAGAGTTGCAGGCAATAAGGACTT GTACCTTGGTACCTTTAGTACACAAGAGGAAGCGGCGGAAGCTTACGACATAGCAGCCATAAAATTCCGAGGGACAAGTG CAGTGACCAACTTCGACATTAGCCGATACGACGTCAAAAGAATATGTTCAAGTTCCACTTTGATAGCCGGCGAGCTGGCA AAACGGTCTCCACGAGATACAGGCCCCACAATGCTGCTCGAAAACTGTAGTCATGACCCGGGTGATGATTTCGCTGACAT GGTATGGGCTGGAAACCAGGAGGAGCCGCCTGGACTCGAAGACCAACAAGGTGCAAGTAATATCGAGAACATGAGCCCGA GTGAGTTAGCCGGTGATCTTGACCCAGGGGTTGGATGA |