
Microexon ID | Ha_10:121665817-121665825:- |
Species | Helianthus annuus | Coordinates | 10:121665817..121665825 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAAAATACCTGGAACCAGAATCAGAATAAGAAGGGCAAGCAAGTTTATTTAGGTGCATATGATGATGAGGAAGCTGCTGCCAGAGCATATGATCTTGCTGCC |
Microexon-tag Amino Acid Seq | WDKNTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAA |
Microexon-tag spanning region | 121665672-121666066 |
Microexon-tag prediction score | 0.9678 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG11250x |
Reference Transcript ID | OTG11250 |
Gene ID | HannXRQ_Chr10g0296651 |
Gene Name | NA |
Transcript ID | OTG11250 |
Protein ID | OTG11250 |
Gene ID | HannXRQ_Chr10g0296651 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.2e-13 |
Motif start | 79 |
Motif end | 137 |
Protein seq | >OTG11250 MATASSSDPVMKSEGSVSGSAGEASDAAAAAAVGKASGYQQQLMVKYRGLKKSKKERGCTAKERISKMPPCAAGKRSSIY RGVTRHRWTGRYEAHLWDKNTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNLS REDYLASLRRKGSGFSRGTSKCHGVSSTRWDSPLGRIAGADYHSRMHHGDDATTESEYVGGFCMDRKIDLTPYIKWWGPN KSCQTESQLKSSDETNNASSEDTGSDHKTSEWVTQPTEPYQLPRLGVSPEGKQHKRSSVSAMSILSRSAAYKSLQEKAAK KEAENDVENDENENKININKMDYGKAVEKSSDDGGAPEGFGVGLGMDLERNTYPLAPFLSAPLLTNYNTIDPLTDPILWS SLVPSLRTRPSQPVEATKTETSSDYTFFQQEDLLPT* |
CDS seq | >OTG11250 ATGGCTACTGCATCTTCATCCGATCCGGTCATGAAATCGGAAGGTAGCGTTAGCGGCAGCGCCGGTGAGGCTTCCGACGC GGCTGCGGCGGCGGCGGTAGGTAAGGCGAGCGGTTACCAGCAGCAGTTGATGGTGAAGTATAGAGGATTGAAGAAATCGA AGAAGGAGAGAGGTTGTACGGCGAAAGAACGGATCAGTAAGATGCCGCCGTGTGCTGCCGGAAAACGGAGCTCTATCTAC CGTGGTGTTACTAGGCATAGATGGACTGGCCGTTATGAAGCGCATCTATGGGATAAAAATACCTGGAACCAGAATCAGAA TAAGAAGGGCAAGCAAGTTTATTTAGGTGCATATGATGATGAGGAAGCTGCTGCCAGAGCATATGATCTTGCTGCCTTGA AGTATTGGGGCCCTGGGACACTCATTAATTTTCCGGTAACAGACTATACAAGAGATCTTGAAGAGATGCAAAACCTATCA AGAGAAGATTACCTTGCATCACTCAGAAGAAAAGGTAGTGGTTTCTCAAGAGGAACCTCTAAATGTCATGGAGTTTCCAG TACTAGATGGGACTCTCCCTTGGGCCGGATTGCTGGAGCCGATTACCACAGCCGCATGCATCATGGTGATGATGCAACAA CAGAGAGCGAATACGTTGGTGGATTTTGCATGGATAGGAAAATTGATCTTACACCTTACATTAAATGGTGGGGACCGAAC AAGTCCTGCCAAACTGAATCTCAATTAAAATCATCAGACGAAACAAATAATGCTAGTTCCGAAGACACTGGAAGTGACCA TAAAACGTCAGAATGGGTAACCCAACCCACCGAACCCTATCAGCTGCCTCGTTTGGGTGTCTCTCCTGAAGGAAAACAAC ATAAACGGTCTTCAGTATCCGCCATGAGTATACTGTCAAGATCTGCAGCTTACAAAAGCTTACAAGAAAAGGCTGCAAAA AAGGAAGCTGAAAACGATGTTGAAAATGACGAGAATGAAAACAAAATTAACATCAACAAGATGGATTACGGTAAAGCGGT TGAGAAATCAAGTGATGATGGTGGTGCACCTGAAGGATTTGGAGTTGGATTAGGGATGGATCTTGAAAGAAACACGTACC CTTTGGCTCCATTCTTGTCTGCACCACTTTTGACCAACTATAATACGATTGACCCGTTGACCGACCCTATTCTTTGGTCA TCCCTTGTCCCTTCTCTCCGCACCAGACCTTCTCAGCCCGTAGAGGCTACAAAGACAGAAACCAGTTCGGATTATACTTT CTTCCAACAGGAGGACTTGCTACCTACATGA |
Microexon DNA seq | TTTATTTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAAAATACCTGGAACCAGAATCAGAATAAGAAGGGCAAGCAAGTTTATTTAGGTGCATATGATGATGAGGAAGCTGCTGCCAGAGCATATGATCTTGCTGCC |
Microexon-tag Amino Acid seq | WDKNTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAA |
Transcript ID | OTG11250 |
Gene ID | Ha.5168 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.2e-13 |
Motif start | 79 |
Motif end | 137 |
Protein seq | >OTG11250 MATASSSDPVMKSEGSVSGSAGEASDAAAAAAVGKASGYQQQLMVKYRGLKKSKKERGCTAKERISKMPPCAAGKRSSIY RGVTRHRWTGRYEAHLWDKNTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNLS REDYLASLRRKGSGFSRGTSKCHGVSSTRWDSPLGRIAGADYHSRMHHGDDATTESEYVGGFCMDRKIDLTPYIKWWGPN KSCQTESQLKSSDETNNASSEDTGSDHKTSEWVTQPTEPYQLPRLGVSPEGKQHKRSSVSAMSILSRSAAYKSLQEKAAK KEAENDVENDENENKININKMDYGKAVEKSSDDGGAPEGFGVGLGMDLERNTYPLAPFLSAPLLTNYNTIDPLTDPILWS SLVPSLRTRPSQPVEATKTETSSDYTFFQQEDLLPT* |
CDS seq | >OTG11250 ATGGCTACTGCATCTTCATCCGATCCGGTCATGAAATCGGAAGGTAGCGTTAGCGGCAGCGCCGGTGAGGCTTCCGACGC GGCTGCGGCGGCGGCGGTAGGTAAGGCGAGCGGTTACCAGCAGCAGTTGATGGTGAAGTATAGAGGATTGAAGAAATCGA AGAAGGAGAGAGGTTGTACGGCGAAAGAACGGATCAGTAAGATGCCGCCGTGTGCTGCCGGAAAACGGAGCTCTATCTAC CGTGGTGTTACTAGGCATAGATGGACTGGCCGTTATGAAGCGCATCTATGGGATAAAAATACCTGGAACCAGAATCAGAA TAAGAAGGGCAAGCAAGTTTATTTAGGTGCATATGATGATGAGGAAGCTGCTGCCAGAGCATATGATCTTGCTGCCTTGA AGTATTGGGGCCCTGGGACACTCATTAATTTTCCGGTAACAGACTATACAAGAGATCTTGAAGAGATGCAAAACCTATCA AGAGAAGATTACCTTGCATCACTCAGAAGAAAAGGTAGTGGTTTCTCAAGAGGAACCTCTAAATGTCATGGAGTTTCCAG TACTAGATGGGACTCTCCCTTGGGCCGGATTGCTGGAGCCGATTACCACAGCCGCATGCATCATGGTGATGATGCAACAA CAGAGAGCGAATACGTTGGTGGATTTTGCATGGATAGGAAAATTGATCTTACACCTTACATTAAATGGTGGGGACCGAAC AAGTCCTGCCAAACTGAATCTCAATTAAAATCATCAGACGAAACAAATAATGCTAGTTCCGAAGACACTGGAAGTGACCA TAAAACGTCAGAATGGGTAACCCAACCCACCGAACCCTATCAGCTGCCTCGTTTGGGTGTCTCTCCTGAAGGAAAACAAC ATAAACGGTCTTCAGTATCCGCCATGAGTATACTGTCAAGATCTGCAGCTTACAAAAGCTTACAAGAAAAGGCTGCAAAA AAGGAAGCTGAAAACGATGTTGAAAATGACGAGAATGAAAACAAAATTAACATCAACAAGATGGATTACGGTAAAGCGGT TGAGAAATCAAGTGATGATGGTGGTGCACCTGAAGGATTTGGAGTTGGATTAGGGATGGATCTTGAAAGAAACACGTACC CTTTGGCTCCATTCTTGTCTGCACCACTTTTGACCAACTATAATACGATTGACCCGTTGACCGACCCTATTCTTTGGTCA TCCCTTGTCCCTTCTCTCCGCACCAGACCTTCTCAGCCCGTAGAGGCTACAAAGACAGAAACCAGTTCGGATTATACTTT CTTCCAACAGGAGGACTTGCTACCTACATGA |