
Microexon ID | Gm_9:46953089-46953097:+ |
Species | Glycine max | Coordinates | 9:46953089..46953097 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGTAGAAGAGAGGGACAGACTCGCAAAGGAAGGCAAGTTTACTTGGGTGGTTATGATAAAGAAGAAAAGGCAGCTAGAGCCTACGATTTGGCAGCA |
Microexon-tag Amino Acid Seq | WDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 46952852-46953273 |
Microexon-tag prediction score | 0.9714 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH40267x |
Reference Transcript ID | KRH40267 |
Gene ID | GLYMA_09G248200 |
Gene Name | NA |
Transcript ID | KRH40267 |
Protein ID | KRH40267 |
Gene ID | GLYMA_09G248200 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.6e-12 |
Motif start | 266 |
Motif end | 324 |
Protein seq | >KRH40267 MGSMNLLGFSLSPHEEHPSSQDHSQTTPSRFSFNPDGSISSTDVAGGCFDLTSDSTPHLLNLPSYGIYEAFHRNNSINTT QDWKENYNSQNLLLGTSCNKQNMNQNQQQQPKLENFLGGHSFGEHEQTYGGNSASTDYMFPAQPVSAGGGGSGGGSNNNN NSNSIGLSMIKTWLRNQPPNSENINNNNESGGNIRSSVQQTLSLSMSTGSQSSTSLPLLTASVDNGESSSDNKQPNTSAA LDSTQTGAIETAPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAAL KYWGTTTTTNFPISHYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS TQEEAAEAYDVAAIKFRGLSAVTNFDMSRYDVKSILESTTLPIGGAAKRLKDMEQVELSVDNGHRADQVDHSIIMSSHLT QGINNNYAGGGTATHHNWHNAHAFHQPQPCTTMHYPYGQRINWCKQEQQDNSDAPHSLSYSDIHQLQLGNNGTHNFFHTN SGLHPMLSMDSASIDNSSSSNSVVYDGYGGGGGYNVMPMGTTTAVVASDGDQNPRSNHGFGDNEIKALGYESVYGSATDS YHAHARNLYYLTQQQSSSVDTVKASAYDQGSACNTWVPTAIPTHAPRSTTSMALCHGATTPFSLLHE* |
CDS seq | >KRH40267 ATGGGGTCTATGAATTTGTTAGGTTTTTCTCTCTCTCCTCACGAAGAACACCCTTCTAGTCAAGATCACTCTCAAACGAC ACCTTCTCGTTTTAGCTTCAACCCTGATGGATCAATCTCAAGCACTGATGTAGCAGGAGGCTGCTTTGATCTCACTTCTG ACTCAACTCCTCATTTACTTAACCTTCCTTCTTATGGCATATACGAAGCATTTCACAGAAACAATAGTATTAACACCACT CAAGATTGGAAGGAGAACTACAACAGCCAAAATTTGCTATTGGGAACTTCGTGCAATAAACAAAACATGAACCAAAACCA ACAGCAACAGCCAAAGCTTGAAAACTTCCTCGGTGGACACTCATTTGGCGAACATGAGCAAACCTACGGTGGTAACTCAG CCTCTACAGATTACATGTTTCCTGCTCAGCCAGTATCGGCTGGTGGTGGTGGTAGTGGTGGTGGCAGTAACAATAACAAC AACAGTAACTCCATAGGGTTATCCATGATAAAGACATGGTTGAGGAACCAACCACCGAACTCAGAAAACATCAACAACAA CAATGAAAGTGGTGGCAATATTAGAAGCAGTGTGCAGCAAACTCTATCACTTTCCATGAGTACTGGTTCACAATCAAGCA CATCACTGCCCCTTCTCACTGCTAGTGTGGATAATGGAGAGAGTTCTTCTGATAACAAACAACCAAACACCTCGGCTGCA CTTGATTCCACCCAAACCGGAGCCATTGAAACTGCACCCAGAAAGTCCATTGACACTTTTGGACAGAGAACTTCTATCTA CCGTGGTGTAACAAGGCATAGGTGGACGGGGAGGTACGAGGCTCACCTGTGGGATAATAGTTGTAGAAGAGAGGGACAGA CTCGCAAAGGAAGGCAAGTTTACTTGGGTGGTTATGATAAAGAAGAAAAGGCAGCTAGAGCCTACGATTTGGCAGCACTA AAATACTGGGGAACAACCACAACAACAAATTTTCCAATTAGCCACTATGAGAAAGAGTTGGAAGAAATGAAGCACATGAC TAGGCAAGAGTACGTTGCGTCATTGAGAAGGAAGAGTAGTGGGTTTTCTCGCGGTGCATCCATTTATCGAGGAGTGACGA GACACCACCAACATGGAAGGTGGCAAGCGAGGATTGGAAGAGTTGCTGGCAACAAGGATCTTTACTTGGGAACTTTTAGC ACCCAAGAAGAGGCAGCGGAAGCATATGATGTAGCAGCAATCAAATTCCGAGGACTAAGTGCTGTTACAAACTTTGACAT GAGCAGATATGACGTGAAAAGCATACTTGAGAGCACCACTTTGCCAATAGGTGGTGCTGCAAAGCGTTTGAAGGATATGG AGCAGGTTGAACTGAGTGTGGATAATGGTCATAGAGCAGATCAAGTAGATCATAGTATCATCATGAGTTCTCACCTAACT CAAGGAATCAATAACAACTATGCAGGAGGGGGAACAGCAACTCATCATAACTGGCACAATGCTCATGCATTCCACCAACC TCAACCTTGCACCACCATGCACTACCCTTATGGACAAAGAATTAATTGGTGCAAGCAAGAACAACAAGACAACTCTGATG CCCCTCACTCTTTGTCTTATTCAGATATTCATCAACTTCAGCTAGGGAACAATGGAACACATAACTTCTTTCACACAAAT TCAGGGTTGCACCCTATGTTGAGCATGGATTCTGCTTCCATTGACAATAGCTCTTCTTCTAACTCGGTTGTTTATGATGG TTATGGAGGTGGTGGGGGCTACAATGTGATGCCTATGGGAACTACTACTGCTGTTGTTGCAAGTGATGGTGATCAAAATC CAAGAAGCAATCATGGTTTTGGTGATAATGAGATAAAAGCACTTGGTTATGAAAGTGTGTATGGCTCTGCAACTGATTCT TATCATGCACATGCAAGGAACTTGTATTATCTTACTCAACAGCAATCATCTTCTGTTGATACAGTGAAGGCTAGTGCATA TGATCAAGGGTCTGCATGCAATACTTGGGTTCCAACTGCTATTCCAACTCATGCACCCAGATCAACTACTAGTATGGCTC TCTGCCATGGGGCTACTACACCCTTCTCTTTATTGCATGAATAG |
Microexon DNA seq | TTTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGTTGTAGAAGAGAGGGACAGACTCGCAAAGGAAGGCAAGTTTACTTGGGTGGTTATGATAAAGAAGAAAAGGCAGCTAGAGCCTACGATTTGGCAGCA |
Microexon-tag Amino Acid seq | WDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAA |
Transcript ID | KRH40267 |
Gene ID | Gm.54197 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.6e-12 |
Motif start | 266 |
Motif end | 324 |
Protein seq | >KRH40267 MGSMNLLGFSLSPHEEHPSSQDHSQTTPSRFSFNPDGSISSTDVAGGCFDLTSDSTPHLLNLPSYGIYEAFHRNNSINTT QDWKENYNSQNLLLGTSCNKQNMNQNQQQQPKLENFLGGHSFGEHEQTYGGNSASTDYMFPAQPVSAGGGGSGGGSNNNN NSNSIGLSMIKTWLRNQPPNSENINNNNESGGNIRSSVQQTLSLSMSTGSQSSTSLPLLTASVDNGESSSDNKQPNTSAA LDSTQTGAIETAPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAAL KYWGTTTTTNFPISHYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS TQEEAAEAYDVAAIKFRGLSAVTNFDMSRYDVKSILESTTLPIGGAAKRLKDMEQVELSVDNGHRADQVDHSIIMSSHLT QGINNNYAGGGTATHHNWHNAHAFHQPQPCTTMHYPYGQRINWCKQEQQDNSDAPHSLSYSDIHQLQLGNNGTHNFFHTN SGLHPMLSMDSASIDNSSSSNSVVYDGYGGGGGYNVMPMGTTTAVVASDGDQNPRSNHGFGDNEIKALGYESVYGSATDS YHAHARNLYYLTQQQSSSVDTVKASAYDQGSACNTWVPTAIPTHAPRSTTSMALCHGATTPFSLLHE* |
CDS seq | >KRH40267 ATGGGGTCTATGAATTTGTTAGGTTTTTCTCTCTCTCCTCACGAAGAACACCCTTCTAGTCAAGATCACTCTCAAACGAC ACCTTCTCGTTTTAGCTTCAACCCTGATGGATCAATCTCAAGCACTGATGTAGCAGGAGGCTGCTTTGATCTCACTTCTG ACTCAACTCCTCATTTACTTAACCTTCCTTCTTATGGCATATACGAAGCATTTCACAGAAACAATAGTATTAACACCACT CAAGATTGGAAGGAGAACTACAACAGCCAAAATTTGCTATTGGGAACTTCGTGCAATAAACAAAACATGAACCAAAACCA ACAGCAACAGCCAAAGCTTGAAAACTTCCTCGGTGGACACTCATTTGGCGAACATGAGCAAACCTACGGTGGTAACTCAG CCTCTACAGATTACATGTTTCCTGCTCAGCCAGTATCGGCTGGTGGTGGTGGTAGTGGTGGTGGCAGTAACAATAACAAC AACAGTAACTCCATAGGGTTATCCATGATAAAGACATGGTTGAGGAACCAACCACCGAACTCAGAAAACATCAACAACAA CAATGAAAGTGGTGGCAATATTAGAAGCAGTGTGCAGCAAACTCTATCACTTTCCATGAGTACTGGTTCACAATCAAGCA CATCACTGCCCCTTCTCACTGCTAGTGTGGATAATGGAGAGAGTTCTTCTGATAACAAACAACCAAACACCTCGGCTGCA CTTGATTCCACCCAAACCGGAGCCATTGAAACTGCACCCAGAAAGTCCATTGACACTTTTGGACAGAGAACTTCTATCTA CCGTGGTGTAACAAGGCATAGGTGGACGGGGAGGTACGAGGCTCACCTGTGGGATAATAGTTGTAGAAGAGAGGGACAGA CTCGCAAAGGAAGGCAAGTTTACTTGGGTGGTTATGATAAAGAAGAAAAGGCAGCTAGAGCCTACGATTTGGCAGCACTA AAATACTGGGGAACAACCACAACAACAAATTTTCCAATTAGCCACTATGAGAAAGAGTTGGAAGAAATGAAGCACATGAC TAGGCAAGAGTACGTTGCGTCATTGAGAAGGAAGAGTAGTGGGTTTTCTCGCGGTGCATCCATTTATCGAGGAGTGACGA GACACCACCAACATGGAAGGTGGCAAGCGAGGATTGGAAGAGTTGCTGGCAACAAGGATCTTTACTTGGGAACTTTTAGC ACCCAAGAAGAGGCAGCGGAAGCATATGATGTAGCAGCAATCAAATTCCGAGGACTAAGTGCTGTTACAAACTTTGACAT GAGCAGATATGACGTGAAAAGCATACTTGAGAGCACCACTTTGCCAATAGGTGGTGCTGCAAAGCGTTTGAAGGATATGG AGCAGGTTGAACTGAGTGTGGATAATGGTCATAGAGCAGATCAAGTAGATCATAGTATCATCATGAGTTCTCACCTAACT CAAGGAATCAATAACAACTATGCAGGAGGGGGAACAGCAACTCATCATAACTGGCACAATGCTCATGCATTCCACCAACC TCAACCTTGCACCACCATGCACTACCCTTATGGACAAAGAATTAATTGGTGCAAGCAAGAACAACAAGACAACTCTGATG CCCCTCACTCTTTGTCTTATTCAGATATTCATCAACTTCAGCTAGGGAACAATGGAACACATAACTTCTTTCACACAAAT TCAGGGTTGCACCCTATGTTGAGCATGGATTCTGCTTCCATTGACAATAGCTCTTCTTCTAACTCGGTTGTTTATGATGG TTATGGAGGTGGTGGGGGCTACAATGTGATGCCTATGGGAACTACTACTGCTGTTGTTGCAAGTGATGGTGATCAAAATC CAAGAAGCAATCATGGTTTTGGTGATAATGAGATAAAAGCACTTGGTTATGAAAGTGTGTATGGCTCTGCAACTGATTCT TATCATGCACATGCAAGGAACTTGTATTATCTTACTCAACAGCAATCATCTTCTGTTGATACAGTGAAGGCTAGTGCATA TGATCAAGGGTCTGCATGCAATACTTGGGTTCCAACTGCTATTCCAACTCATGCACCCAGATCAACTACTAGTATGGCTC TCTGCCATGGGGCTACTACACCCTTCTCTTTATTGCATGAATAG |