
Microexon ID | Gm_8:41327348-41327356:+ |
Species | Glycine max | Coordinates | 8:41327348..41327356 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TATATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAAGGGACCTGGAATCCCACTCAGAAGAAGAAAGGAAAGCAAGTATATTTGGGAGCTTATAATGATGAAGAAGCTGCAGCTAGAGCTTATGATTTGGCTGCA |
Microexon-tag Amino Acid Seq | WDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAA |
Microexon-tag spanning region | 41327174-41327499 |
Microexon-tag prediction score | 0.9428 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH45852x |
Reference Transcript ID | KRH45852 |
Gene ID | GLYMA_08G297000 |
Gene Name | NA |
Transcript ID | KRH45852 |
Protein ID | KRH45852 |
Gene ID | GLYMA_08G297000 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 5.2e-12 |
Motif start | 72 |
Motif end | 131 |
Protein seq | >KRH45852 MELAPVKSELSPRSHRLLMIDGSEVIGTKCVKRRRRDSSTAVLGGNGQQGEQLEEQKQLGGQSTATTVKRSSRFRGVSRH RWTGRFEAHLWDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAALKYWGISTFTNFPVSDYEKEIEIMKTVTKEEYLA SLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRW LRPGTHPTASHDQKPSTDAQPFATSNSMQARGNIEVSNSNKNSFPSGKLDSTKKRDFSKYMNPLSPCNKPSSPTALGLLL KSSVFRELMQRNLNSSSEEAEEVELKYPHEGNDGVGGIYDNENTNNSYFCSSNISRLPNLESSEESPLPMYHGTVQSLWN SAFNMSN* |
CDS seq | >KRH45852 ATGGAGCTTGCACCTGTGAAGTCTGAACTAAGTCCAAGGAGCCATAGGTTGCTCATGATAGATGGTAGTGAGGTTATTGG CACTAAGTGTGTCAAAAGGCGGCGAAGAGATTCATCTACGGCCGTGTTAGGTGGCAATGGACAACAAGGTGAACAGTTAG AAGAACAGAAGCAACTTGGTGGCCAATCAACTGCCACCACTGTGAAGAGAAGCTCAAGGTTCAGGGGTGTTAGCAGACAC AGGTGGACTGGAAGGTTTGAAGCACATCTATGGGATAAAGGGACCTGGAATCCCACTCAGAAGAAGAAAGGAAAGCAAGT ATATTTGGGAGCTTATAATGATGAAGAAGCTGCAGCTAGAGCTTATGATTTGGCTGCACTCAAGTACTGGGGAATATCAA CTTTCACAAATTTTCCTGTATCTGATTATGAGAAAGAAATTGAGATAATGAAAACTGTAACCAAAGAAGAATATCTTGCT TCATTGAGAAGGAGGAGCAGTGGTTTTTCCAGAGGTGTATCGAAGTATAGAGGAGTAGCAAGGCATCATCACAATGGAAG ATGGGAAGCAAGGATTGGGAGAGTGTTCGGTAACAAGTACCTCTACCTTGGGACTTACAGTACACAAGAAGAAGCAGCTC GCGCATATGACATTGCAGCAATTGAATACAGAGGCATAAATGCAGTGACAAACTTTGACTTGAGCACCTACATAAGATGG CTAAGACCGGGAACACATCCTACTGCTTCTCATGATCAAAAGCCTAGCACTGATGCTCAACCTTTTGCAACCTCTAACTC CATGCAAGCAAGAGGGAACATTGAGGTATCCAACTCCAACAAGAATTCATTCCCCTCAGGTAAATTGGACAGTACCAAGA AGCGAGACTTTTCCAAGTACATGAACCCTTTGAGTCCATGCAACAAGCCATCTTCCCCAACAGCATTAGGACTTCTCCTA AAATCCTCAGTGTTTAGAGAACTGATGCAGAGAAATCTGAACTCTTCTAGTGAAGAAGCTGAAGAAGTTGAATTGAAATA TCCACATGAGGGCAATGATGGAGTTGGAGGGATTTATGATAATGAAAACACCAATAACTCTTACTTTTGCTCTTCTAATA TCAGCAGATTACCTAACTTGGAGTCATCAGAAGAGAGTCCATTGCCTATGTATCATGGAACTGTGCAATCACTATGGAAT AGTGCTTTCAACATGTCTAACTGA |
Microexon DNA seq | TATATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAAGGGACCTGGAATCCCACTCAGAAGAAGAAAGGAAAGCAAGTATATTTGGGAGCTTATAATGATGAAGAAGCTGCAGCTAGAGCTTATGATTTGGCTGCA |
Microexon-tag Amino Acid seq | WDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAA |
Transcript ID | KRH45852 |
Gene ID | Gm.51062 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 5.2e-12 |
Motif start | 72 |
Motif end | 131 |
Protein seq | >KRH45852 MELAPVKSELSPRSHRLLMIDGSEVIGTKCVKRRRRDSSTAVLGGNGQQGEQLEEQKQLGGQSTATTVKRSSRFRGVSRH RWTGRFEAHLWDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAALKYWGISTFTNFPVSDYEKEIEIMKTVTKEEYLA SLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRW LRPGTHPTASHDQKPSTDAQPFATSNSMQARGNIEVSNSNKNSFPSGKLDSTKKRDFSKYMNPLSPCNKPSSPTALGLLL KSSVFRELMQRNLNSSSEEAEEVELKYPHEGNDGVGGIYDNENTNNSYFCSSNISRLPNLESSEESPLPMYHGTVQSLWN SAFNMSN* |
CDS seq | >KRH45852 ATGGAGCTTGCACCTGTGAAGTCTGAACTAAGTCCAAGGAGCCATAGGTTGCTCATGATAGATGGTAGTGAGGTTATTGG CACTAAGTGTGTCAAAAGGCGGCGAAGAGATTCATCTACGGCCGTGTTAGGTGGCAATGGACAACAAGGTGAACAGTTAG AAGAACAGAAGCAACTTGGTGGCCAATCAACTGCCACCACTGTGAAGAGAAGCTCAAGGTTCAGGGGTGTTAGCAGACAC AGGTGGACTGGAAGGTTTGAAGCACATCTATGGGATAAAGGGACCTGGAATCCCACTCAGAAGAAGAAAGGAAAGCAAGT ATATTTGGGAGCTTATAATGATGAAGAAGCTGCAGCTAGAGCTTATGATTTGGCTGCACTCAAGTACTGGGGAATATCAA CTTTCACAAATTTTCCTGTATCTGATTATGAGAAAGAAATTGAGATAATGAAAACTGTAACCAAAGAAGAATATCTTGCT TCATTGAGAAGGAGGAGCAGTGGTTTTTCCAGAGGTGTATCGAAGTATAGAGGAGTAGCAAGGCATCATCACAATGGAAG ATGGGAAGCAAGGATTGGGAGAGTGTTCGGTAACAAGTACCTCTACCTTGGGACTTACAGTACACAAGAAGAAGCAGCTC GCGCATATGACATTGCAGCAATTGAATACAGAGGCATAAATGCAGTGACAAACTTTGACTTGAGCACCTACATAAGATGG CTAAGACCGGGAACACATCCTACTGCTTCTCATGATCAAAAGCCTAGCACTGATGCTCAACCTTTTGCAACCTCTAACTC CATGCAAGCAAGAGGGAACATTGAGGTATCCAACTCCAACAAGAATTCATTCCCCTCAGGTAAATTGGACAGTACCAAGA AGCGAGACTTTTCCAAGTACATGAACCCTTTGAGTCCATGCAACAAGCCATCTTCCCCAACAGCATTAGGACTTCTCCTA AAATCCTCAGTGTTTAGAGAACTGATGCAGAGAAATCTGAACTCTTCTAGTGAAGAAGCTGAAGAAGTTGAATTGAAATA TCCACATGAGGGCAATGATGGAGTTGGAGGGATTTATGATAATGAAAACACCAATAACTCTTACTTTTGCTCTTCTAATA TCAGCAGATTACCTAACTTGGAGTCATCAGAAGAGAGTCCATTGCCTATGTATCATGGAACTGTGCAATCACTATGGAAT AGTGCTTTCAACATGTCTAACTGA |