
Microexon ID | Gm_8:37696730-37696738:- |
Species | Glycine max | Coordinates | 8:37696730..37696738 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGCTGTAGGCGAGAGGGTCAGGCCAGGAAAGGGCGTCAAGTGTACTTGGGTGGATATGACAAGGAAGATAAGGCTGCGAGGGCTTATGATTTAGCAGCT |
Microexon-tag Amino Acid Seq | WDNSCRREGQARKGRQVYLGGYDKEDKAARAYDLAA |
Microexon-tag spanning region | 37696575-37698972 |
Microexon-tag prediction score | 0.9678 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH45548x |
Reference Transcript ID | KRH45548 |
Gene ID | GLYMA_08G279000 |
Gene Name | NA |
Transcript ID | KRH45548 |
Protein ID | KRH45548 |
Gene ID | GLYMA_08G279000 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 5e-12 |
Motif start | 164 |
Motif end | 222 |
Protein seq | >KRH45548 MAGATNWLTFSLTHMEMQQFGPYDTTTHSHCFNDSNFYGWTNSKSVMDSQSETQQLAVPKMEDFYFGDHQQDLKAMIVPG FKALSGTNSGSEVDDSTSNKTVTRVAPAALGGAHSGESNCKGSALTLCDVAANGSDDSNNKAVVAVGFDTRKKVAHTFGQ RTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDKAARAYDLAALKYWGPTATTNFPELEEMEHAGR QEFIASLRRKSSGFSRGASAYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGSSAVTNFEMS RYDVDTILNNSLPVGGVAKRLKVSPATENKALISTIIQPPQNTNASSSINFSAIQPVSSIPYDSAITCYPHNFFHHHFNP TNGGTSSSDSAAAAAVTDAIALNTLPPPAVPGFFIWPHQSY* |
CDS seq | >KRH45548 ATGGCTGGTGCCACGAATTGGCTTACGTTTTCGTTGACTCACATGGAAATGCAGCAGTTCGGTCCATACGACACCACCAC TCACTCTCACTGCTTCAACGACAGCAATTTTTATGGGTGGACGAATTCTAAGAGCGTCATGGATTCACAGAGTGAGACCC AACAACTTGCGGTGCCAAAAATGGAAGATTTTTACTTCGGTGATCACCAGCAAGATCTGAAGGCGATGATTGTTCCTGGG TTCAAAGCGTTGTCTGGGACCAACTCGGGGTCCGAGGTGGATGACTCGACCTCCAACAAGACGGTGACTCGGGTTGCACC CGCTGCGTTGGGCGGTGCTCACTCTGGCGAATCTAATTGTAAAGGATCAGCTTTGACTTTATGCGATGTTGCTGCGAATG GTTCTGATGATAGTAATAATAAGGCCGTTGTTGCCGTGGGGTTTGATACTCGGAAGAAGGTTGCTCATACGTTTGGCCAG CGAACTTCAATTTACAGAGGGGTCACAAGGCACCGATGGACGGGAAGATATGAAGCGCATCTATGGGATAACAGCTGTAG GCGAGAGGGTCAGGCCAGGAAAGGGCGTCAAGTGTACTTGGGTGGATATGACAAGGAAGATAAGGCTGCGAGGGCTTATG ATTTAGCAGCTCTAAAGTACTGGGGACCAACAGCCACGACTAACTTTCCTGAATTGGAGGAGATGGAACATGCAGGAAGG CAAGAATTTATTGCATCACTGCGAAGGAAAAGTAGTGGTTTTTCAAGGGGAGCTTCTGCTTACAGAGGTGTTACAAGGCA TCACCAACAGGGTAGATGGCAAGCAAGAATTGGCCGAGTTGCGGGAAACAAGGATCTATACTTGGGAACATTTTCAACTG AAGAGGAGGCAGCAGAGGCTTATGACATTGCAGCCATAAAGTTCAGAGGTTCGAGCGCCGTAACCAATTTCGAGATGAGT CGATATGACGTCGACACTATATTGAACAACTCGCTTCCAGTTGGTGGCGTAGCAAAGCGCTTGAAAGTTTCCCCAGCAAC GGAGAACAAAGCTCTTATCAGCACCATTATTCAACCACCTCAGAACACAAACGCAAGTAGCAGCATCAATTTCTCAGCCA TTCAGCCAGTTTCTTCTATACCCTATGATTCTGCAATCACATGTTACCCCCACAACTTCTTCCACCACCATTTCAATCCT ACCAACGGTGGAACTAGCTCATCAGATTCTGCTGCTGCTGCAGCAGTGACCGATGCGATTGCACTCAATACCCTTCCACC ACCAGCAGTTCCTGGGTTCTTCATATGGCCTCACCAGTCCTACTGA |
Microexon DNA seq | TGTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGCTGTAGGCGAGAGGGTCAGGCCAGGAAAGGGCGTCAAGTGTACTTGGGTGGATATGACAAGGAAGATAAGGCTGCGAGGGCTTATGATTTAGCAGCT |
Microexon-tag Amino Acid seq | WDNSCRREGQARKGRQVYLGGYDKEDKAARAYDLAA |
Transcript ID | Gm.50886.1 |
Gene ID | Gm.50886 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 4.4e-12 |
Motif start | 118 |
Motif end | 176 |
Protein seq | >Gm.50886.1 MDSQSETQQLAVPKMEDFYFGDHQQDLKAMIVPGFKALSGTNSGSEVDDSTSNKTVTRVAPAALGGAHSGESNCKGSALT LCDVAANGSDDSNNKAVVAVGFDTRKKVAHTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKE DKAARAYDLAALKYWGPTATTNFPISNYTKELEEMEHAGRQEFIASLRRKSSGFSRGASAYRGVTRHHQQGRWQARIGRV AGNKDLYLGTFSTEEEAAEAYDIAAIKFRGSSAVTNFEMSRYDVDTILNNSLPVGGVAKRLKVSPATENKALISTIIQPP QNTNASSSINFSAIQPVSSIPYDSAITCYPHNFFHHHFNPTNGGTSSSDSAAAAAVTDAIALNTLPPPAVPGFFIWPHQS Y* |
CDS seq | >Gm.50886.1 ATGGATTCACAGAGTGAGACCCAACAACTTGCGGTGCCAAAAATGGAAGATTTTTACTTCGGTGATCACCAGCAAGATCT GAAGGCGATGATTGTTCCTGGGTTCAAAGCGTTGTCTGGGACCAACTCGGGGTCCGAGGTGGATGACTCGACCTCCAACA AGACGGTGACTCGGGTTGCACCCGCTGCGTTGGGCGGTGCTCACTCTGGCGAATCTAATTGTAAAGGATCAGCTTTGACT TTATGCGATGTTGCTGCGAATGGTTCTGATGATAGTAATAATAAGGCCGTTGTTGCCGTGGGGTTTGATACTCGGAAGAA GGTTGCTCATACGTTTGGCCAGCGAACTTCAATTTACAGAGGGGTCACAAGGCACCGATGGACGGGAAGATATGAAGCGC ATCTATGGGATAACAGCTGTAGGCGAGAGGGTCAGGCCAGGAAAGGGCGTCAAGTGTACTTGGGTGGATATGACAAGGAA GATAAGGCTGCGAGGGCTTATGATTTAGCAGCTCTAAAGTACTGGGGACCAACAGCCACGACTAACTTTCCTATTTCCAA TTATACAAAGGAATTGGAGGAGATGGAACATGCAGGAAGGCAAGAATTTATTGCATCACTGCGAAGGAAAAGTAGTGGTT TTTCAAGGGGAGCTTCTGCTTACAGAGGTGTTACAAGGCATCACCAACAGGGTAGATGGCAAGCAAGAATTGGCCGAGTT GCGGGAAACAAGGATCTATACTTGGGAACATTTTCAACTGAAGAGGAGGCAGCAGAGGCTTATGACATTGCAGCCATAAA GTTCAGAGGTTCGAGCGCCGTAACCAATTTCGAGATGAGTCGATATGACGTCGACACTATATTGAACAACTCGCTTCCAG TTGGTGGCGTAGCAAAGCGCTTGAAAGTTTCCCCAGCAACGGAGAACAAAGCTCTTATCAGCACCATTATTCAACCACCT CAGAACACAAACGCAAGTAGCAGCATCAATTTCTCAGCCATTCAGCCAGTTTCTTCTATACCCTATGATTCTGCAATCAC ATGTTACCCCCACAACTTCTTCCACCACCATTTCAATCCTACCAACGGTGGAACTAGCTCATCAGATTCTGCTGCTGCTG CAGCAGTGACCGATGCGATTGCACTCAATACCCTTCCACCACCAGCAGTTCCTGGGTTCTTCATATGGCCTCACCAGTCC TACTGA |