
Microexon ID | Gm_18:54213539-54213547:+ |
Species | Glycine max | Coordinates | 18:54213539..54213547 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTACCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAACTCTCTTGGAACATAACACAGAAGAAGAAAGGGAAGCAAGTTTACCTTGGGGCTTATGATGAAGAAGAATCTGCTGCCAGAGCATATGATTTAGCTGCA |
Microexon-tag Amino Acid Seq | WDKLSWNITQKKKGKQVYLGAYDEEESAARAYDLAA |
Microexon-tag spanning region | 54213336-54213692 |
Microexon-tag prediction score | 0.9338 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH01131x |
Reference Transcript ID | KRH01131 |
Gene ID | GLYMA_18G256000 |
Gene Name | NA |
Transcript ID | KRH01131 |
Protein ID | KRH01131 |
Gene ID | GLYMA_18G256000 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.3e-13 |
Motif start | 71 |
Motif end | 130 |
Protein seq | >KRH01131 MVMMKENIIEEKLGRSQMSMVEGEFQGTWGVKRRRREVAAAASSGDDNHHQQLPQQEVGENSSISTTKRSSRFRGVSRHR WTGRYEAHLWDKLSWNITQKKKGKQVYLGAYDEEESAARAYDLAALKYWGNSTFTNFPISDYEKEIEIMQTMTKEEYLAT LRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIKWL KPSGGGTPEENLESHAVLEHQKLASPSNYALTEESKSLVLPNSFISPDSLDSPVKHESFGNKTYQFSRNKSSSPTALGLL LRSSLFRELVEKNSNVSGEEADGEVTKDQQPQLASDDDLDGIFFDSFGDIPFVCDPTRYNLELQERDLHSIF* |
CDS seq | >KRH01131 ATGGTAATGATGAAAGAGAATATTATTGAAGAGAAGCTTGGAAGGAGCCAAATGTCTATGGTAGAAGGTGAGTTCCAAGG AACATGGGGTGTCAAGAGACGACGAAGAGAGGTTGCTGCAGCAGCAAGCAGCGGTGATGATAACCACCACCAGCAGTTAC CACAGCAAGAAGTTGGTGAAAATTCTTCAATCAGCACAACAAAGAGAAGCTCAAGATTTCGCGGTGTTAGCAGACATAGA TGGACGGGTCGGTATGAAGCTCACTTGTGGGACAAACTCTCTTGGAACATAACACAGAAGAAGAAAGGGAAGCAAGTTTA CCTTGGGGCTTATGATGAAGAAGAATCTGCTGCCAGAGCATATGATTTAGCTGCACTTAAGTATTGGGGAAATTCAACTT TCACCAATTTTCCAATATCAGATTATGAGAAAGAGATAGAAATAATGCAGACTATGACTAAAGAGGAGTATTTGGCCACT TTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTATCAAAGTATCGGGGCGTTGCAAGGCACCACCACAATGGTAGATG GGAAGCAAGAATAGGAAGGGTTTTTGGAAACAAATATCTCTACCTTGGCACCTACAGCACCCAAGAAGAAGCTGCGCGTG CTTATGACATAGCAGCCATTGAGTACAGAGGAATTCATGCTGTAACAAACTTTGATTTGAGCACTTACATAAAATGGTTA AAGCCTTCAGGAGGAGGCACCCCAGAAGAAAATCTTGAATCACATGCAGTACTAGAGCATCAAAAGTTGGCATCCCCATC TAATTATGCTCTAACAGAAGAGTCTAAGTCTTTGGTCCTTCCCAACAGTTTTATCAGTCCAGATTCTCTGGATTCACCTG TAAAGCATGAAAGTTTTGGAAACAAAACCTACCAATTCTCAAGAAATAAGTCATCTTCTCCCACTGCACTTGGTCTCCTT CTGCGCTCTTCATTATTTAGAGAATTGGTTGAAAAGAATTCAAATGTTTCTGGAGAAGAAGCTGATGGGGAAGTCACAAA AGATCAACAGCCACAACTAGCTAGCGATGATGATCTGGATGGAATCTTCTTCGATAGCTTTGGCGATATTCCATTTGTGT GTGATCCCACTAGATACAACTTGGAATTGCAGGAAAGAGACCTGCACTCAATATTTTGA |
Microexon DNA seq | TTTACCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAACTCTCTTGGAACATAACACAGAAGAAGAAAGGGAAGCAAGTTTACCTTGGGGCTTATGATGAAGAAGAATCTGCTGCCAGAGCATATGATTTAGCTGCA |
Microexon-tag Amino Acid seq | WDKLSWNITQKKKGKQVYLGAYDEEESAARAYDLAA |
Transcript ID | KRH01131 |
Gene ID | Gm.26307 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.3e-13 |
Motif start | 71 |
Motif end | 130 |
Protein seq | >KRH01131 MVMMKENIIEEKLGRSQMSMVEGEFQGTWGVKRRRREVAAAASSGDDNHHQQLPQQEVGENSSISTTKRSSRFRGVSRHR WTGRYEAHLWDKLSWNITQKKKGKQVYLGAYDEEESAARAYDLAALKYWGNSTFTNFPISDYEKEIEIMQTMTKEEYLAT LRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIKWL KPSGGGTPEENLESHAVLEHQKLASPSNYALTEESKSLVLPNSFISPDSLDSPVKHESFGNKTYQFSRNKSSSPTALGLL LRSSLFRELVEKNSNVSGEEADGEVTKDQQPQLASDDDLDGIFFDSFGDIPFVCDPTRYNLELQERDLHSIF* |
CDS seq | >KRH01131 ATGGTAATGATGAAAGAGAATATTATTGAAGAGAAGCTTGGAAGGAGCCAAATGTCTATGGTAGAAGGTGAGTTCCAAGG AACATGGGGTGTCAAGAGACGACGAAGAGAGGTTGCTGCAGCAGCAAGCAGCGGTGATGATAACCACCACCAGCAGTTAC CACAGCAAGAAGTTGGTGAAAATTCTTCAATCAGCACAACAAAGAGAAGCTCAAGATTTCGCGGTGTTAGCAGACATAGA TGGACGGGTCGGTATGAAGCTCACTTGTGGGACAAACTCTCTTGGAACATAACACAGAAGAAGAAAGGGAAGCAAGTTTA CCTTGGGGCTTATGATGAAGAAGAATCTGCTGCCAGAGCATATGATTTAGCTGCACTTAAGTATTGGGGAAATTCAACTT TCACCAATTTTCCAATATCAGATTATGAGAAAGAGATAGAAATAATGCAGACTATGACTAAAGAGGAGTATTTGGCCACT TTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTATCAAAGTATCGGGGCGTTGCAAGGCACCACCACAATGGTAGATG GGAAGCAAGAATAGGAAGGGTTTTTGGAAACAAATATCTCTACCTTGGCACCTACAGCACCCAAGAAGAAGCTGCGCGTG CTTATGACATAGCAGCCATTGAGTACAGAGGAATTCATGCTGTAACAAACTTTGATTTGAGCACTTACATAAAATGGTTA AAGCCTTCAGGAGGAGGCACCCCAGAAGAAAATCTTGAATCACATGCAGTACTAGAGCATCAAAAGTTGGCATCCCCATC TAATTATGCTCTAACAGAAGAGTCTAAGTCTTTGGTCCTTCCCAACAGTTTTATCAGTCCAGATTCTCTGGATTCACCTG TAAAGCATGAAAGTTTTGGAAACAAAACCTACCAATTCTCAAGAAATAAGTCATCTTCTCCCACTGCACTTGGTCTCCTT CTGCGCTCTTCATTATTTAGAGAATTGGTTGAAAAGAATTCAAATGTTTCTGGAGAAGAAGCTGATGGGGAAGTCACAAA AGATCAACAGCCACAACTAGCTAGCGATGATGATCTGGATGGAATCTTCTTCGATAGCTTTGGCGATATTCCATTTGTGT GTGATCCCACTAGATACAACTTGGAATTGCAGGAAAGAGACCTGCACTCAATATTTTGA |