
Microexon ID | Gm_18:25337770-25337778:+ |
Species | Glycine max | Coordinates | 18:25337770..25337778 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGCTGTAGGCGAGAGGGTCAGGCCAGGAAAGGGCGTCAAGTGTACTTGGGTGGTTATGACAAGGAAGATAAGGCTGCGAGGGCTTATGATTTAGCAGCT |
Microexon-tag Amino Acid Seq | WDNSCRREGQARKGRQVYLGGYDKEDKAARAYDLAA |
Microexon-tag spanning region | 25336029-25337937 |
Microexon-tag prediction score | 0.9677 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRG99477x |
Reference Transcript ID | KRG99477 |
Gene ID | GLYMA_18G148000 |
Gene Name | NA |
Transcript ID | KRG99477 |
Protein ID | KRG99477 |
Gene ID | GLYMA_18G148000 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 5e-12 |
Motif start | 160 |
Motif end | 218 |
Protein seq | >KRG99477 MAGATKNWLTFSLTPMETQFGPYDITTPSHCFNDNNFYGWANSKGVMDSQSETQQLAVPKMEDFYFGDHQQDLKAIVPGF KALSGTNSVDDSAPNKTTTRVAPAELTGAHSGESCKGSALSLCDVAANGSDDSNDNKAIVAVGFDTRKKVAHTFGQRTSI YRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDKAARAYDLAALKYWGPKATTNFPISNYTKELEEMKHV GKQEFIASLRRKSSGFSRGASAYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGASAVTNFE MRRYDVDAILNNSLPVGGIAKRFKVSPETENKALVSTIQPPQNTNASSSINFSTIQPVSSIPYDSAITCYPHNLFHHFNP TNGESSTAEFAATMTDAIALATLPPLAVPGFFVWPHQNY* |
CDS seq | >KRG99477 ATGGCTGGTGCCACCAAAAATTGGCTTACGTTTTCGTTGACTCCCATGGAAACGCAGTTCGGTCCATACGACATCACCAC TCCCTCTCACTGCTTCAACGACAACAACTTTTATGGGTGGGCGAATTCAAAGGGTGTGATGGATTCACAGAGTGAGACCC AACAACTTGCGGTGCCGAAAATGGAAGATTTTTACTTCGGTGATCACCAGCAAGATCTGAAGGCGATTGTTCCTGGGTTC AAAGCGCTCTCTGGGACCAACTCGGTGGATGACTCGGCCCCCAACAAGACGACGACTCGGGTTGCGCCCGCTGAGTTGAC TGGTGCTCACTCAGGCGAGTCTTGCAAAGGATCTGCTTTGTCGTTATGCGATGTTGCTGCAAATGGTTCTGATGATAGTA ATGATAATAAGGCCATTGTTGCGGTGGGGTTTGATACTCGGAAGAAGGTTGCTCATACCTTTGGCCAGCGAACTTCAATT TACAGAGGGGTCACAAGGCACCGATGGACGGGCAGATATGAAGCGCATCTATGGGATAACAGCTGTAGGCGAGAGGGTCA GGCCAGGAAAGGGCGTCAAGTGTACTTGGGTGGTTATGACAAGGAAGATAAGGCTGCGAGGGCTTATGATTTAGCAGCTC TAAAGTACTGGGGACCAAAAGCAACCACTAACTTTCCTATTTCCAATTATACAAAGGAATTGGAGGAGATGAAGCATGTA GGAAAGCAAGAATTTATTGCATCACTGCGAAGGAAAAGCAGTGGTTTTTCGAGGGGAGCTTCTGCTTACAGGGGTGTTAC AAGGCATCACCAACAGGGTAGATGGCAAGCGAGAATTGGCCGGGTTGCGGGAAACAAGGATCTATATTTGGGAACATTTT CAACTGAAGAGGAGGCAGCAGAGGCATATGATATTGCAGCCATAAAGTTCAGAGGTGCAAGTGCCGTAACCAATTTCGAG ATGAGGCGATATGACGTCGACGCTATATTGAACAACTCTCTTCCAGTTGGCGGCATAGCAAAACGCTTTAAAGTTTCCCC AGAAACGGAGAACAAAGCTCTTGTCAGCACCATTCAACCACCTCAGAACACAAACGCCAGTAGCAGCATCAATTTCTCAA CCATTCAGCCAGTGTCTTCTATACCCTATGATTCTGCAATCACATGTTACCCCCACAACCTCTTCCACCATTTTAATCCC ACCAACGGTGAAAGTAGCACTGCAGAATTTGCTGCAACTATGACCGATGCAATCGCACTCGCTACCCTTCCACCACTGGC AGTTCCTGGGTTCTTCGTATGGCCTCATCAGAACTATTGA |
Microexon DNA seq | TGTACTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAACAGCTGTAGGCGAGAGGGTCAGGCCAGGAAAGGGCGTCAAGTGTACTTGGGTGGTTATGACAAGGAAGATAAGGCTGCGAGGGCTTATGATTTAGCAGCT |
Microexon-tag Amino Acid seq | WDNSCRREGQARKGRQVYLGGYDKEDKAARAYDLAA |
Transcript ID | KRG99477 |
Gene ID | Gm.25322 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 5e-12 |
Motif start | 160 |
Motif end | 218 |
Protein seq | >KRG99477 MAGATKNWLTFSLTPMETQFGPYDITTPSHCFNDNNFYGWANSKGVMDSQSETQQLAVPKMEDFYFGDHQQDLKAIVPGF KALSGTNSVDDSAPNKTTTRVAPAELTGAHSGESCKGSALSLCDVAANGSDDSNDNKAIVAVGFDTRKKVAHTFGQRTSI YRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDKAARAYDLAALKYWGPKATTNFPISNYTKELEEMKHV GKQEFIASLRRKSSGFSRGASAYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGASAVTNFE MRRYDVDAILNNSLPVGGIAKRFKVSPETENKALVSTIQPPQNTNASSSINFSTIQPVSSIPYDSAITCYPHNLFHHFNP TNGESSTAEFAATMTDAIALATLPPLAVPGFFVWPHQNY* |
CDS seq | >KRG99477 ATGGCTGGTGCCACCAAAAATTGGCTTACGTTTTCGTTGACTCCCATGGAAACGCAGTTCGGTCCATACGACATCACCAC TCCCTCTCACTGCTTCAACGACAACAACTTTTATGGGTGGGCGAATTCAAAGGGTGTGATGGATTCACAGAGTGAGACCC AACAACTTGCGGTGCCGAAAATGGAAGATTTTTACTTCGGTGATCACCAGCAAGATCTGAAGGCGATTGTTCCTGGGTTC AAAGCGCTCTCTGGGACCAACTCGGTGGATGACTCGGCCCCCAACAAGACGACGACTCGGGTTGCGCCCGCTGAGTTGAC TGGTGCTCACTCAGGCGAGTCTTGCAAAGGATCTGCTTTGTCGTTATGCGATGTTGCTGCAAATGGTTCTGATGATAGTA ATGATAATAAGGCCATTGTTGCGGTGGGGTTTGATACTCGGAAGAAGGTTGCTCATACCTTTGGCCAGCGAACTTCAATT TACAGAGGGGTCACAAGGCACCGATGGACGGGCAGATATGAAGCGCATCTATGGGATAACAGCTGTAGGCGAGAGGGTCA GGCCAGGAAAGGGCGTCAAGTGTACTTGGGTGGTTATGACAAGGAAGATAAGGCTGCGAGGGCTTATGATTTAGCAGCTC TAAAGTACTGGGGACCAAAAGCAACCACTAACTTTCCTATTTCCAATTATACAAAGGAATTGGAGGAGATGAAGCATGTA GGAAAGCAAGAATTTATTGCATCACTGCGAAGGAAAAGCAGTGGTTTTTCGAGGGGAGCTTCTGCTTACAGGGGTGTTAC AAGGCATCACCAACAGGGTAGATGGCAAGCGAGAATTGGCCGGGTTGCGGGAAACAAGGATCTATATTTGGGAACATTTT CAACTGAAGAGGAGGCAGCAGAGGCATATGATATTGCAGCCATAAAGTTCAGAGGTGCAAGTGCCGTAACCAATTTCGAG ATGAGGCGATATGACGTCGACGCTATATTGAACAACTCTCTTCCAGTTGGCGGCATAGCAAAACGCTTTAAAGTTTCCCC AGAAACGGAGAACAAAGCTCTTGTCAGCACCATTCAACCACCTCAGAACACAAACGCCAGTAGCAGCATCAATTTCTCAA CCATTCAGCCAGTGTCTTCTATACCCTATGATTCTGCAATCACATGTTACCCCCACAACCTCTTCCACCATTTTAATCCC ACCAACGGTGAAAGTAGCACTGCAGAATTTGCTGCAACTATGACCGATGCAATCGCACTCGCTACCCTTCCACCACTGGC AGTTCCTGGGTTCTTCGTATGGCCTCATCAGAACTATTGA |