
Microexon ID | Gm_17:5548302-5548310:- |
Species | Glycine max | Coordinates | 17:5548302..5548310 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTACCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAACATTGCTGGAATGAATCACAGAACAAAAAAGGGCGACAAGTCTACCTTGGCGCTTATGACAATGAAGAGGCAGCAGCACATGCTTATGATCTAGCAGCA |
Microexon-tag Amino Acid Seq | WDKHCWNESQNKKGRQVYLGAYDNEEAAAHAYDLAA |
Microexon-tag spanning region | 5548165-5548514 |
Microexon-tag prediction score | 0.9576 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH02994x |
Reference Transcript ID | KRH02994 |
Gene ID | GLYMA_17G070800 |
Gene Name | NA |
Transcript ID | KRH02994 |
Protein ID | KRH02994 |
Gene ID | GLYMA_17G070800 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 4.6e-13 |
Motif start | 50 |
Motif end | 108 |
Protein seq | >KRH02994 MAKKSQLRTQKNNVTTNDDNNLNVTNTVTTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKHCWNESQNKK GRQVYLGAYDNEEAAAHAYDLAALKYWGQDTILNFPLSNYLNELKEMEGQSREEYIGSLRRKSSGFSRGISKYRGVARHH HNGRWEARIGKVFGNKYLYLGTYATQEEAATAYDLAAIEYRGLNAVTNFDLSRYIKWLKPNNNTNNVIDDQISINLTNIN NNNNCTNSFTPSPDQEQEASFFHNKDSLNNTIVEEVTLVPHQPRPASATSALELLLQSSKFKEMMEMTSVANLSSTQMES ELPQCTFPDHIQTYFEYEDSNRYEEGDDLMFKFNEFSSIVPFYQCDEFES* |
CDS seq | >KRH02994 ATGGCCAAAAAATCACAGCTGCGTACCCAGAAAAACAATGTTACCACCAATGACGATAATAATCTTAACGTAACCAACAC TGTGACCACCAAGGTGAAACGAACAAGGAGAAGTGTCCCTAGAGACTCCCCACCTCAACGCAGCTCAATATACCGAGGAG TCACTAGGCACCGATGGACAGGCCGATACGAAGCTCATTTGTGGGACAAACATTGCTGGAATGAATCACAGAACAAAAAA GGGCGACAAGTCTACCTTGGCGCTTATGACAATGAAGAGGCAGCAGCACATGCTTATGATCTAGCAGCACTGAAATACTG GGGTCAAGATACCATTCTTAATTTTCCGTTATCAAACTACCTGAACGAACTGAAAGAAATGGAGGGTCAATCACGGGAGG AGTATATCGGATCGCTGAGGAGGAAAAGCAGTGGTTTTTCTCGGGGAATTTCTAAATACAGAGGTGTTGCAAGGCATCAT CATAACGGAAGGTGGGAGGCTCGGATTGGCAAAGTTTTTGGCAATAAATATCTTTACCTCGGAACTTATGCTACCCAAGA AGAAGCTGCTACTGCCTATGACCTGGCAGCCATAGAATACCGTGGACTCAATGCTGTCACCAATTTCGATCTCAGCCGTT ACATTAAGTGGCTTAAGCCTAACAACAACACCAACAACGTTATCGACGACCAGATTAGTATTAATCTCACTAACATAAAC AATAATAATAATTGCACTAACAGCTTCACCCCAAGTCCTGATCAAGAACAAGAAGCTAGCTTCTTCCACAACAAAGATTC ACTCAATAATACTATTGTAGAAGAAGTCACGTTGGTGCCACATCAGCCTCGTCCAGCGAGTGCCACGTCAGCATTGGAGC TTCTACTTCAGTCATCAAAGTTCAAGGAAATGATGGAGATGACATCTGTGGCCAATCTTTCATCAACACAGATGGAATCT GAGTTGCCACAGTGCACATTTCCTGATCACATTCAGACGTACTTTGAGTATGAAGATTCCAATAGATATGAGGAAGGAGA TGATCTCATGTTCAAGTTCAACGAGTTCAGCTCCATTGTGCCGTTTTACCAATGTGACGAGTTCGAGAGTTGA |
Microexon DNA seq | TCTACCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAACATTGCTGGAATGAATCACAGAACAAAAAAGGGCGACAAGTCTACCTTGGCGCTTATGACAATGAAGAGGCAGCAGCACATGCTTATGATCTAGCAGCA |
Microexon-tag Amino Acid seq | WDKHCWNESQNKKGRQVYLGAYDNEEAAAHAYDLAA |
Transcript ID | KRH02994 |
Gene ID | Gm.22097 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 4.6e-13 |
Motif start | 50 |
Motif end | 108 |
Protein seq | >KRH02994 MAKKSQLRTQKNNVTTNDDNNLNVTNTVTTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKHCWNESQNKK GRQVYLGAYDNEEAAAHAYDLAALKYWGQDTILNFPLSNYLNELKEMEGQSREEYIGSLRRKSSGFSRGISKYRGVARHH HNGRWEARIGKVFGNKYLYLGTYATQEEAATAYDLAAIEYRGLNAVTNFDLSRYIKWLKPNNNTNNVIDDQISINLTNIN NNNNCTNSFTPSPDQEQEASFFHNKDSLNNTIVEEVTLVPHQPRPASATSALELLLQSSKFKEMMEMTSVANLSSTQMES ELPQCTFPDHIQTYFEYEDSNRYEEGDDLMFKFNEFSSIVPFYQCDEFES* |
CDS seq | >KRH02994 ATGGCCAAAAAATCACAGCTGCGTACCCAGAAAAACAATGTTACCACCAATGACGATAATAATCTTAACGTAACCAACAC TGTGACCACCAAGGTGAAACGAACAAGGAGAAGTGTCCCTAGAGACTCCCCACCTCAACGCAGCTCAATATACCGAGGAG TCACTAGGCACCGATGGACAGGCCGATACGAAGCTCATTTGTGGGACAAACATTGCTGGAATGAATCACAGAACAAAAAA GGGCGACAAGTCTACCTTGGCGCTTATGACAATGAAGAGGCAGCAGCACATGCTTATGATCTAGCAGCACTGAAATACTG GGGTCAAGATACCATTCTTAATTTTCCGTTATCAAACTACCTGAACGAACTGAAAGAAATGGAGGGTCAATCACGGGAGG AGTATATCGGATCGCTGAGGAGGAAAAGCAGTGGTTTTTCTCGGGGAATTTCTAAATACAGAGGTGTTGCAAGGCATCAT CATAACGGAAGGTGGGAGGCTCGGATTGGCAAAGTTTTTGGCAATAAATATCTTTACCTCGGAACTTATGCTACCCAAGA AGAAGCTGCTACTGCCTATGACCTGGCAGCCATAGAATACCGTGGACTCAATGCTGTCACCAATTTCGATCTCAGCCGTT ACATTAAGTGGCTTAAGCCTAACAACAACACCAACAACGTTATCGACGACCAGATTAGTATTAATCTCACTAACATAAAC AATAATAATAATTGCACTAACAGCTTCACCCCAAGTCCTGATCAAGAACAAGAAGCTAGCTTCTTCCACAACAAAGATTC ACTCAATAATACTATTGTAGAAGAAGTCACGTTGGTGCCACATCAGCCTCGTCCAGCGAGTGCCACGTCAGCATTGGAGC TTCTACTTCAGTCATCAAAGTTCAAGGAAATGATGGAGATGACATCTGTGGCCAATCTTTCATCAACACAGATGGAATCT GAGTTGCCACAGTGCACATTTCCTGATCACATTCAGACGTACTTTGAGTATGAAGATTCCAATAGATATGAGGAAGGAGA TGATCTCATGTTCAAGTTCAACGAGTTCAGCTCCATTGTGCCGTTTTACCAATGTGACGAGTTCGAGAGTTGA |