
Microexon ID | Gm_12:4101138-4101146:+ |
Species | Glycine max | Coordinates | 12:4101138..4101146 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGCTGTAGAAGGGAAGGCCAATCAAGAAAAGGACGCCAAGTTTATTTGGGTGGATATGATAAAGAAGAGAAAGCAGCTAGAGCTTATGATTTAGCTGCA |
Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 4100941-4101305 |
Microexon-tag prediction score | 0.9653 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH24688x |
Reference Transcript ID | KRH24688 |
Gene ID | GLYMA_12G056300 |
Gene Name | NA |
Transcript ID | KRH24688 |
Protein ID | KRH24688 |
Gene ID | GLYMA_12G056300 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.8e-13 |
Motif start | 164 |
Motif end | 222 |
Protein seq | >KRH24688 MNNNWLSFPLSPTHSSLPAHDLQATQYHQFSLGLVNENMDNPFQNHDWNLINTHSSNEIPKVADFLGVSKSENQSDLAAL NEIHSNDSDYLFTNNSLVPMQNPVLDTPSNEYQENANSNLQSLTLSMGSGKDSTCETSGENSTNTTVEVAPRRTLDTFGQ RTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDE MKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAV TNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSSSTFQYGTSASSSRLHAYPLMQHHHQFEQPQ PLLTLQNHDISSSHFSHQQDPLHHQGYIQTQLQLHQQSGASSYSFQNNAQFYNGYLQNHPALLQGMMNMGSSSSSSSVLE NNNSNNNNNNVGGFVGSGFGMASNATAGNTVGTAEELGLVKVDYDMPAGGYGGWSAADSMQTSNGGVFTMWND* |
CDS seq | >KRH24688 ATGAACAACAACTGGCTTTCGTTCCCTCTTTCTCCTACTCATTCTTCCTTACCAGCTCATGATCTTCAAGCAACTCAATA TCATCAATTTTCCCTTGGGTTAGTGAACGAGAACATGGATAACCCTTTCCAAAATCATGATTGGAATCTGATTAACACCC ATAGTAGCAACGAAATTCCAAAAGTGGCTGATTTTCTAGGAGTGAGCAAGTCTGAAAATCAGTCAGACCTTGCAGCCTTA AACGAAATTCATTCAAATGATTCAGATTATCTGTTCACAAACAACAGTCTGGTGCCTATGCAAAACCCTGTGTTGGACAC ACCTAGCAATGAGTATCAAGAAAATGCTAATAGTAATTTGCAATCATTGACATTATCCATGGGAAGTGGTAAGGATTCAA CATGTGAAACCAGTGGTGAAAATAGCACAAACACTACTGTTGAAGTTGCACCTAGAAGAACTTTGGATACATTCGGGCAG AGAACATCCATATATCGTGGAGTAACTCGACATAGATGGACTGGAAGGTATGAAGCTCATCTTTGGGATAATAGCTGTAG AAGGGAAGGCCAATCAAGAAAAGGACGCCAAGTTTATTTGGGTGGATATGATAAAGAAGAGAAAGCAGCTAGAGCTTATG ATTTAGCTGCACTGAAGTACTGGGGGACATCCACCACTACCAACTTTCCAATTAGCAACTATGAGAAGGAATTGGATGAA ATGAAACACATGACGAGACAAGAATTTGTTGCCGCCATTAGAAGGAAAAGCAGTGGTTTCTCCAGGGGTGCATCAATGTA TCGTGGAGTTACAAGGCATCACCAACACGGAAGATGGCAAGCAAGGATTGGCAGAGTTGCAGGAAACAAAGATCTTTACT TGGGAACTTTCAGTACTGAGGAAGAGGCTGCAGAAGCATACGACATAGCAGCGATAAAGTTCAGAGGTCTCAACGCTGTC ACAAACTTTGACATGAGCCGCTACGACGTGAAAGCCATTCTTGAAAGCAACACTCTCCCAATAGGAGGAGGCGCTGCAAA GCGTCTGAAAGAAGCTCAAGCTCTAGAATCTTCGAGAAAACGCGAAGAGATGATTGCACTAGGCTCATCTTCCACGTTCC AATACGGAACCTCAGCAAGCTCTTCTAGGCTTCACGCTTACCCTCTAATGCAGCACCACCACCAGTTCGAGCAACCTCAA CCTCTGCTAACTCTTCAAAACCACGACATAAGTTCTTCTCACTTCTCTCACCAGCAAGACCCTTTGCATCATCAGGGTTA CATCCAAACGCAGCTTCAGTTGCACCAGCAGAGTGGCGCTTCTTCTTATAGCTTTCAGAATAATGCTCAGTTCTACAATG GTTACCTTCAGAACCACCCTGCATTGCTTCAGGGAATGATGAACATGGGGTCTTCTTCTTCTTCCTCATCTGTGTTGGAG AATAATAATAGTAACAATAATAATAATAATGTTGGTGGGTTTGTGGGAAGTGGGTTTGGTATGGCTTCGAATGCAACGGC GGGGAACACGGTGGGGACAGCGGAGGAGTTAGGGCTGGTGAAGGTGGACTATGACATGCCGGCTGGAGGTTACGGTGGCT GGTCGGCGGCGGACTCCATGCAGACGTCAAATGGTGGGGTGTTCACAATGTGGAATGATTAA |
Microexon DNA seq | TTTATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGCTGTAGAAGGGAAGGCCAATCAAGAAAAGGACGCCAAGTTTATTTGGGTGGATATGATAAAGAAGAGAAAGCAGCTAGAGCTTATGATTTAGCTGCA |
Microexon-tag Amino Acid seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
Transcript ID | Gm.8404.1 |
Gene ID | Gm.8404 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.8e-13 |
Motif start | 164 |
Motif end | 222 |
Protein seq | >Gm.8404.1 MNNNWLSFPLSPTHSSLPAHDLQATQYHQFSLGLVNENMDNPFQNHDWNLINTHSSNEIPKVADFLGVSKSENQSDLAAL NEIHSNDSDYLFTNNSLVPMQNPVLDTPSNEYQENANSNLQSLTLSMGSGKDSTCETSGENSTNTTVEVAPRRTLDTFGQ RTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELDE MKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAV TNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSSSTFQYGTSASSSRLHAYPLMQHHHQFEQPQ PLLTLQNHDISSSHFSHQQDPLHHQGYIQTQLQLHQQSGASSYSFQNNAQFYNGYLQNHPALLQGMMNMGSSSSSSSVLE NNNSNNNNNNVGGFVGSGFGMASNATAGNTVGTAEELGLVKVDYDMPAGGYGGWSAADSMQTSNGGVFTMWND* |
CDS seq | >Gm.8404.1 ATGAACAACAACTGGCTTTCGTTCCCTCTTTCTCCTACTCATTCTTCCTTACCAGCTCATGATCTTCAAGCAACTCAATA TCATCAATTTTCCCTTGGGTTAGTGAACGAGAACATGGATAACCCTTTCCAAAATCATGATTGGAATCTGATTAACACCC ATAGTAGCAACGAAATTCCAAAAGTGGCTGATTTTCTAGGAGTGAGCAAGTCTGAAAATCAGTCAGACCTTGCAGCCTTA AACGAAATTCATTCAAATGATTCAGATTATCTGTTCACAAACAACAGTCTGGTGCCTATGCAAAACCCTGTGTTGGACAC ACCTAGCAATGAGTATCAAGAAAATGCTAATAGTAATTTGCAATCATTGACATTATCCATGGGAAGTGGTAAGGATTCAA CATGTGAAACCAGTGGTGAAAATAGCACAAACACTACTGTTGAAGTTGCACCTAGAAGAACTTTGGATACATTCGGGCAG AGAACATCCATATATCGTGGAGTAACTCGACATAGATGGACTGGAAGGTATGAAGCTCATCTTTGGGATAATAGCTGTAG AAGGGAAGGCCAATCAAGAAAAGGACGCCAAGTTTATTTGGGTGGATATGATAAAGAAGAGAAAGCAGCTAGAGCTTATG ATTTAGCTGCACTGAAGTACTGGGGGACATCCACCACTACCAACTTTCCAATTAGCAACTATGAGAAGGAATTGGATGAA ATGAAACACATGACGAGACAAGAATTTGTTGCCGCCATTAGAAGGAAAAGCAGTGGTTTCTCCAGGGGTGCATCAATGTA TCGTGGAGTTACAAGGCATCACCAACACGGAAGATGGCAAGCAAGGATTGGCAGAGTTGCAGGAAACAAAGATCTTTACT TGGGAACTTTCAGTACTGAGGAAGAGGCTGCAGAAGCATACGACATAGCAGCGATAAAGTTCAGAGGTCTCAACGCTGTC ACAAACTTTGACATGAGCCGCTACGACGTGAAAGCCATTCTTGAAAGCAACACTCTCCCAATAGGAGGAGGCGCTGCAAA GCGTCTGAAAGAAGCTCAAGCTCTAGAATCTTCGAGAAAACGCGAAGAGATGATTGCACTAGGCTCATCTTCCACGTTCC AATACGGAACCTCAGCAAGCTCTTCTAGGCTTCACGCTTACCCTCTAATGCAGCACCACCACCAGTTCGAGCAACCTCAA CCTCTGCTAACTCTTCAAAACCACGACATAAGTTCTTCTCACTTCTCTCACCAGCAAGACCCTTTGCATCATCAGGGTTA CATCCAAACGCAGCTTCAGTTGCACCAGCAGAGTGGCGCTTCTTCTTATAGCTTTCAGAATAATGCTCAGTTCTACAATG GTTACCTTCAGAACCACCCTGCATTGCTTCAGGGAATGATGAACATGGGGTCTTCTTCTTCTTCCTCATCTGTGTTGGAG AATAATAATAGTAACAATAATAATAATAATGTTGGTGGGTTTGTGGGAAGTGGGTTTGGTATGGCTTCGAATGCAACGGC GGGGAACACGGTGGGGACAGCGGAGGAGTTAGGGCTGGTGAAGGTGGACTATGACATGCCGGCTGGAGGTTACGGTGGCT GGTCGGCGGCGGACTCCATGCAGACGTCAAATGGTGGGGTGTTCACAATGTGGAATGATTAA |