
Microexon ID | Gm_1:52991999-52992007:+ |
Species | Glycine max | Coordinates | 1:52991999..52992007 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAAGAAAGAGGGCCAAGGAAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCAGCAAGAGCTTATGATATGGCCGCA |
Microexon-tag Amino Acid Seq | WDNSCKKEGQGRKGRQVYLGGYDMEEKAARAYDMAA |
Microexon-tag spanning region | 52991761-52992222 |
Microexon-tag prediction score | 0.9721 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH77164x |
Reference Transcript ID | KRH77164 |
Gene ID | GLYMA_01G195900 |
Gene Name | NA |
Transcript ID | KRH77164 |
Protein ID | KRH77164 |
Gene ID | GLYMA_01G195900 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 5.3e-13 |
Motif start | 275 |
Motif end | 333 |
Protein seq | >KRH77164 MKPIENGNTVSINYQNSWLGFSLSPQMNIGVPSHLHQTQPSSAAVEAVPPNFYHHTPLHNYGLYYELEGEHVGMSSSLPI MPLKSNASLSGIEALSRSQAQATTTISAMHSSLNSMLINELLCHGLNNPNNLNHVQEDISQQQFSYYSTLRNQDVILEGS KHQLPCIAEDENPGLKSWFSRDFHARHAEESRMIVPLECNGGESGSIGSITYGDLHSSNLSVSPTSGSSSVTSSPALTNT VATNTKKRWLEMVDQNQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQGRKGRQVYLGGYDMEEKA ARAYDMAALKYWGPSSHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRSQRHHQHGRWQARIGRV AGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMESNNLLSSEQAKRKREMDDGTRSEATVNQKPS TYDHTQETILMQKRCKNQSEWKMVQFPCPQQLDQNQRIESCRTQPFSTDLDNMFRHQVEERSNMGTHLSNPSSLVTSLSS SREESPDKTSMPMLFGMPSTVSKLLANVDSWDLSSNLRTALSMPQMPIFAAWTDA* |
CDS seq | >KRH77164 ATGAAGCCTATAGAAAATGGCAATACCGTTAGCATCAACTATCAAAATAGCTGGTTAGGCTTCTCCCTCTCCCCACAAAT GAATATAGGTGTTCCTTCACACCTTCATCAGACACAGCCTTCATCAGCAGCTGTTGAAGCAGTTCCACCAAACTTTTACC ATCATACACCTCTCCATAATTATGGCCTTTACTATGAACTGGAAGGTGAACACGTTGGAATGAGTTCATCCTTGCCTATC ATGCCCCTTAAGTCCAATGCTTCTCTCTCTGGAATAGAAGCTCTGAGTAGATCACAAGCACAAGCAACGACAACTATTTC AGCAATGCATTCAAGCTTAAATAGTATGCTTATCAACGAACTCTTATGTCATGGACTAAACAATCCAAATAACTTAAATC ACGTTCAAGAGGATATCAGCCAGCAACAATTCTCGTATTACTCTACCTTAAGGAACCAAGATGTGATTTTAGAAGGTTCC AAACACCAGCTCCCATGTATAGCTGAGGATGAAAATCCAGGTTTGAAGAGTTGGTTCTCAAGGGATTTTCATGCTAGACA TGCAGAAGAATCAAGGATGATTGTTCCTTTGGAGTGTAATGGAGGCGAATCTGGATCCATTGGATCAATAACATATGGGG ATTTGCATTCATCGAATTTGTCTGTGAGTCCTACCTCAGGATCAAGCAGTGTTACAAGTTCACCTGCTCTCACTAATACT GTTGCCACTAATACTAAGAAAAGGTGGCTTGAAATGGTGGACCAGAATCAGAAGCAAATAGTTCATAGGAAATCCATAGA TACCTTTGGGCAAAGAACATCTCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTATGGG ACAACAGCTGCAAGAAAGAGGGCCAAGGAAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCA GCAAGAGCTTATGATATGGCCGCACTCAAGTATTGGGGACCCTCCTCTCATATAAATTTCCCATTGGAAAATTATCAAAA CGAACTTGAGGAAATGAAGAACATGACGAGACAAGAATATGTTGCTCATTTACGAAGGAAAAGCAGCGGATTCTCAAGAG GGGCCTCCATGTACAGAGGAGTAACAAGGTCTCAAAGGCACCACCAACATGGAAGGTGGCAAGCTCGAATTGGAAGGGTA GCCGGAAACAAAGATCTATATCTTGGAACCTTTAGTACCCAAGAGGAAGCAGCTGAAGCCTATGACATTGCTGCTATTAA ATTCAGAGGAGTTAATGCTGTCACTAACTTTGATATAACAAGATATGACGTGGAAAAAATTATGGAGAGCAATAACCTTC TTAGCAGTGAACAAGCTAAGCGGAAAAGAGAGATGGATGATGGAACTAGAAGCGAGGCTACCGTTAACCAAAAACCTTCT ACATATGACCACACTCAAGAAACCATTCTAATGCAGAAAAGATGCAAAAACCAATCAGAATGGAAGATGGTTCAGTTTCC ATGCCCCCAACAGCTTGATCAGAATCAAAGAATCGAGAGTTGTAGAACTCAGCCCTTCTCAACGGACTTAGATAACATGT TTCGTCACCAAGTTGAGGAACGGAGCAACATGGGAACACACTTGTCAAATCCTTCTTCTCTGGTGACAAGTTTGAGTAGC TCAAGAGAAGAGAGCCCAGATAAGACAAGCATGCCAATGCTCTTTGGAATGCCTTCAACAGTGTCCAAATTATTGGCTAA CGTGGATTCTTGGGATCTATCTTCCAATCTCAGGACTGCGCTTTCTATGCCTCAGATGCCAATTTTTGCTGCTTGGACAG ATGCATAA |
Microexon DNA seq | TTTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAACAGCTGCAAGAAAGAGGGCCAAGGAAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCAGCAAGAGCTTATGATATGGCCGCA |
Microexon-tag Amino Acid seq | WDNSCKKEGQGRKGRQVYLGGYDMEEKAARAYDMAA |
Transcript ID | KRH77164 |
Gene ID | Gm.1876 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 5.3e-13 |
Motif start | 275 |
Motif end | 333 |
Protein seq | >KRH77164 MKPIENGNTVSINYQNSWLGFSLSPQMNIGVPSHLHQTQPSSAAVEAVPPNFYHHTPLHNYGLYYELEGEHVGMSSSLPI MPLKSNASLSGIEALSRSQAQATTTISAMHSSLNSMLINELLCHGLNNPNNLNHVQEDISQQQFSYYSTLRNQDVILEGS KHQLPCIAEDENPGLKSWFSRDFHARHAEESRMIVPLECNGGESGSIGSITYGDLHSSNLSVSPTSGSSSVTSSPALTNT VATNTKKRWLEMVDQNQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQGRKGRQVYLGGYDMEEKA ARAYDMAALKYWGPSSHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRSQRHHQHGRWQARIGRV AGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMESNNLLSSEQAKRKREMDDGTRSEATVNQKPS TYDHTQETILMQKRCKNQSEWKMVQFPCPQQLDQNQRIESCRTQPFSTDLDNMFRHQVEERSNMGTHLSNPSSLVTSLSS SREESPDKTSMPMLFGMPSTVSKLLANVDSWDLSSNLRTALSMPQMPIFAAWTDA* |
CDS seq | >KRH77164 ATGAAGCCTATAGAAAATGGCAATACCGTTAGCATCAACTATCAAAATAGCTGGTTAGGCTTCTCCCTCTCCCCACAAAT GAATATAGGTGTTCCTTCACACCTTCATCAGACACAGCCTTCATCAGCAGCTGTTGAAGCAGTTCCACCAAACTTTTACC ATCATACACCTCTCCATAATTATGGCCTTTACTATGAACTGGAAGGTGAACACGTTGGAATGAGTTCATCCTTGCCTATC ATGCCCCTTAAGTCCAATGCTTCTCTCTCTGGAATAGAAGCTCTGAGTAGATCACAAGCACAAGCAACGACAACTATTTC AGCAATGCATTCAAGCTTAAATAGTATGCTTATCAACGAACTCTTATGTCATGGACTAAACAATCCAAATAACTTAAATC ACGTTCAAGAGGATATCAGCCAGCAACAATTCTCGTATTACTCTACCTTAAGGAACCAAGATGTGATTTTAGAAGGTTCC AAACACCAGCTCCCATGTATAGCTGAGGATGAAAATCCAGGTTTGAAGAGTTGGTTCTCAAGGGATTTTCATGCTAGACA TGCAGAAGAATCAAGGATGATTGTTCCTTTGGAGTGTAATGGAGGCGAATCTGGATCCATTGGATCAATAACATATGGGG ATTTGCATTCATCGAATTTGTCTGTGAGTCCTACCTCAGGATCAAGCAGTGTTACAAGTTCACCTGCTCTCACTAATACT GTTGCCACTAATACTAAGAAAAGGTGGCTTGAAATGGTGGACCAGAATCAGAAGCAAATAGTTCATAGGAAATCCATAGA TACCTTTGGGCAAAGAACATCTCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTATGGG ACAACAGCTGCAAGAAAGAGGGCCAAGGAAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCA GCAAGAGCTTATGATATGGCCGCACTCAAGTATTGGGGACCCTCCTCTCATATAAATTTCCCATTGGAAAATTATCAAAA CGAACTTGAGGAAATGAAGAACATGACGAGACAAGAATATGTTGCTCATTTACGAAGGAAAAGCAGCGGATTCTCAAGAG GGGCCTCCATGTACAGAGGAGTAACAAGGTCTCAAAGGCACCACCAACATGGAAGGTGGCAAGCTCGAATTGGAAGGGTA GCCGGAAACAAAGATCTATATCTTGGAACCTTTAGTACCCAAGAGGAAGCAGCTGAAGCCTATGACATTGCTGCTATTAA ATTCAGAGGAGTTAATGCTGTCACTAACTTTGATATAACAAGATATGACGTGGAAAAAATTATGGAGAGCAATAACCTTC TTAGCAGTGAACAAGCTAAGCGGAAAAGAGAGATGGATGATGGAACTAGAAGCGAGGCTACCGTTAACCAAAAACCTTCT ACATATGACCACACTCAAGAAACCATTCTAATGCAGAAAAGATGCAAAAACCAATCAGAATGGAAGATGGTTCAGTTTCC ATGCCCCCAACAGCTTGATCAGAATCAAAGAATCGAGAGTTGTAGAACTCAGCCCTTCTCAACGGACTTAGATAACATGT TTCGTCACCAAGTTGAGGAACGGAGCAACATGGGAACACACTTGTCAAATCCTTCTTCTCTGGTGACAAGTTTGAGTAGC TCAAGAGAAGAGAGCCCAGATAAGACAAGCATGCCAATGCTCTTTGGAATGCCTTCAACAGTGTCCAAATTATTGGCTAA CGTGGATTCTTGGGATCTATCTTCCAATCTCAGGACTGCGCTTTCTATGCCTCAGATGCCAATTTTTGCTGCTTGGACAG ATGCATAA |