
Microexon ID | Gm_1:2248409-2248417:- |
Species | Glycine max | Coordinates | 1:2248409..2248417 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAATAGTTGCAGAAGGGAGGGTCAAGCCAGAAAAGGGCGTCAAGTTTATTTGGGTGGATATGATAAGGAAGAAAAGGCCGCGAGAGCTTATGATTTGGCAGCT |
Microexon-tag Amino Acid Seq | WDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 2248244-2249787 |
Microexon-tag prediction score | 0.9705 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH74476x |
Reference Transcript ID | KRH74476 |
Gene ID | GLYMA_01G022500 |
Gene Name | NA |
Transcript ID | KRH74476 |
Protein ID | KRH74476 |
Gene ID | GLYMA_01G022500 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.6e-13 |
Motif start | 224 |
Motif end | 282 |
Protein seq | >KRH74476 MARATNWLSFSLSPMEMLRTSEPQFLQYDAASATSSHHYYLDNLYTNGWGNGSLKFEQNLNHSDVSFVESSSQSVGHVPP PPPKLEDFLGDSSAVMRYSDSQTETQDSSLTHIYDHHHHHHHHHGSTSYFGGDQQDLKAITGFQAFSTNSGSEVDDSASI GKAQASEFGTHSIESSGNEFAAFSGGTTGTLSLAVALSSEKAVVAAESNSSKKIVDTFGQRTSIYRGVTRHRWTGRYEAH LWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYSKEVEEMKHVTKQEFIASLRRKSSGF SRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIMKSSLPV GGAAKRLRLSLESEQKAPPVNSSSQQQNPQCGNVSGSINFSAIHQPIASIPCGIPFDSTTAYYPHNLFQHFHPTNAGAAA SAVTSANATALTALPASAATEFFIWPHQSY* |
CDS seq | >KRH74476 ATGGCTCGTGCTACTAACTGGCTTTCGTTCTCTCTCTCCCCAATGGAAATGCTCCGAACCTCCGAACCTCAGTTCCTTCA ATACGACGCCGCTTCCGCTACTTCCTCACATCACTACTACCTCGACAACTTGTACACCAACGGGTGGGGCAACGGGAGCC TCAAGTTTGAGCAGAATCTCAACCACAGTGACGTGAGTTTTGTTGAATCTTCGTCGCAGAGCGTCGGCCACGTGCCGCCG CCGCCGCCGAAGCTGGAGGATTTTCTCGGCGACTCCTCCGCCGTGATGCGTTACTCCGACAGCCAGACGGAGACGCAGGA CTCGTCGCTGACGCACATCTACGACCACCACCACCACCACCACCACCACCACGGTTCTACTTCGTACTTCGGCGGTGACC AGCAGGATCTCAAGGCCATTACTGGATTTCAAGCTTTTTCGACCAACTCCGGTTCCGAGGTTGATGATTCTGCATCCATC GGAAAAGCGCAGGCCAGCGAGTTCGGGACTCACTCTATTGAGTCCTCCGGCAACGAGTTCGCCGCGTTCTCCGGTGGCAC AACCGGAACCTTGTCGCTCGCCGTTGCACTGAGCTCCGAGAAGGCCGTTGTCGCGGCGGAGTCCAATAGCTCGAAGAAGA TCGTGGATACCTTCGGCCAGCGGACTTCTATTTACAGAGGTGTTACTAGGCACCGATGGACAGGAAGATATGAAGCGCAT CTATGGGACAATAGTTGCAGAAGGGAGGGTCAAGCCAGAAAAGGGCGTCAAGTTTATTTGGGTGGATATGATAAGGAAGA AAAGGCCGCGAGAGCTTATGATTTGGCAGCTCTAAAGTACTGGGGTCCCACTGCTACCACCAACTTCCCTGTTTCCAATT ATTCGAAGGAAGTGGAGGAGATGAAACATGTAACAAAGCAAGAATTTATTGCATCATTGCGGAGGAAAAGTAGTGGTTTC TCCAGGGGAGCTTCCATATACAGAGGTGTTACAAGGCATCATCAACAGGGTAGGTGGCAAGCAAGAATTGGCCGTGTAGC TGGAAACAAAGATTTATACTTGGGAACATTCGCAACCGAGGAGGAAGCAGCAGAGGCATATGATATTGCAGCCATAAAGT TCAGAGGTGCAAACGCGGTAACCAACTTTGAGATGAATAGATATGATGTGGAAGCTATAATGAAGAGTTCTCTTCCAGTG GGTGGGGCAGCAAAACGCTTGAGGCTTTCCCTTGAATCAGAGCAGAAAGCTCCTCCTGTGAACAGCAGCAGTCAGCAGCA GAATCCACAGTGTGGTAACGTGAGTGGTAGCATCAATTTCTCAGCCATTCATCAGCCAATTGCTTCAATCCCTTGTGGAA TTCCGTTTGATTCAACAACAGCATATTATCCTCACAACCTTTTCCAACATTTTCACCCTACCAACGCTGGTGCAGCAGCG TCTGCTGTTACTTCTGCCAATGCAACCGCACTAACTGCACTGCCAGCATCAGCAGCAACTGAGTTCTTTATTTGGCCTCA TCAGTCTTATTGA |
Microexon DNA seq | TTTATTTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAATAGTTGCAGAAGGGAGGGTCAAGCCAGAAAAGGGCGTCAAGTTTATTTGGGTGGATATGATAAGGAAGAAAAGGCCGCGAGAGCTTATGATTTGGCAGCT |
Microexon-tag Amino Acid seq | WDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAA |
Transcript ID | Gm.240.1 |
Gene ID | Gm.240 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 9.6e-13 |
Motif start | 224 |
Motif end | 282 |
Protein seq | >Gm.240.1 MARATNWLSFSLSPMEMLRTSEPQFLQYDAASATSSHHYYLDNLYTNGWGNGSLKFEQNLNHSDVSFVESSSQSVGHVPP PPPKLEDFLGDSSAVMRYSDSQTETQDSSLTHIYDHHHHHHHHHGSTSYFGGDQQDLKAITGFQAFSTNSGSEVDDSASI GKAQASEFGTHSIESSGNEFAAFSGGTTGTLSLAVALSSEKAVVAAESNSSKKIVDTFGQRTSIYRGVTRHRWTGRYEAH LWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYSKEVEEMKHVTKQEFIASLRRKSSGF SRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIMKSSLPV GGAAKRLRLSLESEQKAPPVNSSSQQQNPQCGNVSGSINFSAIHQPIASIPCGIPFDSTTAYYPHNLFQHFHPTNAGAAA SAVTSANATALTALPASAATEFFIWPHQSY* |
CDS seq | >Gm.240.1 ATGGCTCGTGCTACTAACTGGCTTTCGTTCTCTCTCTCCCCAATGGAAATGCTCCGAACCTCCGAACCTCAGTTCCTTCA ATACGACGCCGCTTCCGCTACTTCCTCACATCACTACTACCTCGACAACTTGTACACCAACGGGTGGGGCAACGGGAGCC TCAAGTTTGAGCAGAATCTCAACCACAGTGACGTGAGTTTTGTTGAATCTTCGTCGCAGAGCGTCGGCCACGTGCCGCCG CCGCCGCCGAAGCTGGAGGATTTTCTCGGCGACTCCTCCGCCGTGATGCGTTACTCCGACAGCCAGACGGAGACGCAGGA CTCGTCGCTGACGCACATCTACGACCACCACCACCACCACCACCACCACCACGGTTCTACTTCGTACTTCGGCGGTGACC AGCAGGATCTCAAGGCCATTACTGGATTTCAAGCTTTTTCGACCAACTCCGGTTCCGAGGTTGATGATTCTGCATCCATC GGAAAAGCGCAGGCCAGCGAGTTCGGGACTCACTCTATTGAGTCCTCCGGCAACGAGTTCGCCGCGTTCTCCGGTGGCAC AACCGGAACCTTGTCGCTCGCCGTTGCACTGAGCTCCGAGAAGGCCGTTGTCGCGGCGGAGTCCAATAGCTCGAAGAAGA TCGTGGATACCTTCGGCCAGCGGACTTCTATTTACAGAGGTGTTACTAGGCACCGATGGACAGGAAGATATGAAGCGCAT CTATGGGACAATAGTTGCAGAAGGGAGGGTCAAGCCAGAAAAGGGCGTCAAGTTTATTTGGGTGGATATGATAAGGAAGA AAAGGCCGCGAGAGCTTATGATTTGGCAGCTCTAAAGTACTGGGGTCCCACTGCTACCACCAACTTCCCTGTTTCCAATT ATTCGAAGGAAGTGGAGGAGATGAAACATGTAACAAAGCAAGAATTTATTGCATCATTGCGGAGGAAAAGTAGTGGTTTC TCCAGGGGAGCTTCCATATACAGAGGTGTTACAAGGCATCATCAACAGGGTAGGTGGCAAGCAAGAATTGGCCGTGTAGC TGGAAACAAAGATTTATACTTGGGAACATTCGCAACCGAGGAGGAAGCAGCAGAGGCATATGATATTGCAGCCATAAAGT TCAGAGGTGCAAACGCGGTAACCAACTTTGAGATGAATAGATATGATGTGGAAGCTATAATGAAGAGTTCTCTTCCAGTG GGTGGGGCAGCAAAACGCTTGAGGCTTTCCCTTGAATCAGAGCAGAAAGCTCCTCCTGTGAACAGCAGCAGTCAGCAGCA GAATCCACAGTGTGGTAACGTGAGTGGTAGCATCAATTTCTCAGCCATTCATCAGCCAATTGCTTCAATCCCTTGTGGAA TTCCGTTTGATTCAACAACAGCATATTATCCTCACAACCTTTTCCAACATTTTCACCCTACCAACGCTGGTGCAGCAGCG TCTGCTGTTACTTCTGCCAATGCAACCGCACTAACTGCACTGCCAGCATCAGCAGCAACTGAGTTCTTTATTTGGCCTCA TCAGTCTTATTGA |