| Microexon ID | Bn_scaffoldC07:60291786-60291794:+ |
| Species | Brassica Napus | Coordinates | scaffoldC07:60291786..60291794 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATCTGG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGACAATAGTTTCAAGAAGGAAGGTCATAGCAGAAAAGGAAGACAAGTTTATCTGGGAGGTTATGATATGGAGGAGAAAGCTGCTCGAGCATATGATCTAGCTGCA |
| Microexon-tag Amino Acid Seq | WDNSFKKEGHSRKGRQVYLGGYDMEEKAARAYDLAA |
| Microexon-tag spanning region | 60291586-60291949 |
| Microexon-tag prediction score | 0.9704 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC07T0540500ZSx |
| Reference Transcript ID | BnaC07T0540500ZS |
| Gene ID | BnaC07G0540500ZS |
| Gene Name | NA |
| Transcript ID | BnaC07T0540500ZS |
| Protein ID | |
| Gene ID | BnaC07G0540500ZS |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 7.60E-12 |
| Motif start | 286 |
| Motif end | 344 |
| Protein seq | >BnaC07T0540500ZS MKSFCDNDDNNHGNTTNLLGFSLSSNMLKMGGGGGEEALYSSSSSAATSSSVPPQLVVGDNSSNYGVCFGSNSAAGGMYS QMSVMPLRSDGSLCLMEALNRSSHSNQHHHTQVSSPKMEDFFGTHQNNTSNKEAMDLSLDSLFYNTTHEPNNNTNFQEFF SFPQARNHHEEETRSYQNDPGLTHGGGSFNVGVYGEFQQSLSLSMSPGSQSSCITGTHHHQNQNHQAQNHHQISEALGVE TSVGFETTTMAAAAKKKRGQEEVMVVGQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSFKKEGHSRKGRQV YLGGYDMEEKAARAYDLAALKYWGPSTHTNFSVENYQKEIEDMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGR WQARIGRVAGNKDLYLGTFGTQEEAAEAYDVAAIKFRGTNAVTNFDISRYDVDRIMASNTLLSGELARRNINSIVVRNNN NEETAVNAAVDGGSNKEVNSPERVLSFPAIFALPQVGQKMFGANMVGNMNSWTTNPNAELKAVSHTLPQMPVFAAWADS* |
| CDS seq | >BnaC07T0540500ZS ATGAAGTCCTTTTGTGACAATGATGATAATAATCATGGCAACACGACCAATTTGCTAGGGTTTTCGTTGTCTTCAAATAT GTTGAAAATGGGAGGAGGAGGAGGAGAAGAAGCTCTATACTCATCTTCTTCTTCAGCTGCTACTTCTTCTTCTGTCCCAC CGCAACTTGTTGTTGGTGATAACAGTAGCAACTATGGAGTTTGCTTTGGATCTAACTCAGCGGCTGGGGGAATGTATTCT CAAATGTCTGTGATGCCACTCAGATCTGACGGCTCTCTTTGCTTAATGGAAGCTCTCAATAGATCTTCTCACTCAAACCA GCATCACCATACTCAAGTTTCATCTCCAAAGATGGAGGATTTCTTTGGGACCCATCAGAACAATACAAGTAACAAAGAAG CCATGGATCTTAGCTTAGATAGTTTATTCTACAACACCACTCATGAGCCAAACAACAACACAAACTTTCAAGAGTTCTTT AGCTTCCCACAAGCCAGAAACCACCATGAGGAAGAAACAAGAAGTTACCAGAATGACCCTGGTTTGACACATGGAGGAGG TTCTTTTAATGTAGGGGTATATGGGGAATTTCAACAGTCACTGAGTTTGTCCATGAGCCCTGGGTCACAATCTAGCTGCA TCACTGGCACTCACCACCACCAAAACCAAAACCACCAAGCTCAAAACCACCATCAGATCTCTGAAGCTTTGGGGGTGGAG ACAAGTGTTGGATTTGAGACAACAACAATGGCGGCTGCTGCAAAGAAGAAGAGAGGACAAGAGGAAGTAATGGTTGTTGG ACAGAAACAGATTGTTCATAGAAAATCTATTGATACCTTTGGACAACGAACTTCTCAATACCGAGGCGTTACAAGACACA GATGGACTGGTAGATATGAAGCTCATCTATGGGACAATAGTTTCAAGAAGGAAGGTCATAGCAGAAAAGGAAGACAAGTT TATCTGGGAGGTTATGATATGGAGGAGAAAGCTGCTCGAGCATATGATCTAGCTGCACTCAAGTACTGGGGTCCCTCTAC TCACACCAATTTCTCTGTGGAGAATTATCAGAAAGAGATTGAGGACATGAAGAACATGACTAGACAAGAATATGTTGCTC ACTTGAGAAGAAAAAGCAGTGGTTTCTCTAGGGGTGCTTCCATCTATAGAGGAGTCACAAGACACCACCAGCATGGAAGG TGGCAAGCTCGGATCGGTAGAGTCGCCGGAAACAAAGATCTCTACCTCGGAACTTTTGGAACTCAAGAAGAAGCTGCGGA AGCCTATGATGTAGCAGCCATCAAGTTCCGTGGCACAAACGCTGTGACTAACTTTGATATATCAAGGTACGACGTTGATC GCATAATGGCTAGTAACACACTCTTGTCTGGAGAGTTAGCTAGAAGGAACATCAACAGCATCGTGGTTCGCAACAACAAC AACGAAGAAACCGCTGTTAACGCTGCCGTGGATGGTGGTTCGAACAAAGAAGTGAATAGTCCGGAGAGAGTTTTGAGTTT TCCGGCGATTTTCGCGTTGCCGCAAGTTGGTCAGAAGATGTTTGGAGCAAATATGGTCGGAAACATGAATTCCTGGACTA CGAACCCTAATGCTGAGCTCAAGGCCGTCTCACATACTTTGCCTCAGATGCCTGTTTTCGCTGCGTGGGCTGATTCTTGA |
Bn_scaffoldC07:60291786-60291794:+ does not have available information here.