| Microexon ID | Bn_scaffoldC02:10485795-10485803:+ |
| Species | Brassica Napus | Coordinates | scaffoldC02:10485795..10485803 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATTTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAACAGTTGCCGAAGAGAAGGCCAAAGCAGAAAAGGAAGACAAGTTTATTTAGGTGGTTATGACAAGGAAGACAAAGCTGCTAGAGCTTATGATCTTGCAGCT |
| Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA |
| Microexon-tag spanning region | 10485537-10486003 |
| Microexon-tag prediction score | 0.9809 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC02T0145300ZSx |
| Reference Transcript ID | BnaC02T0145300ZS |
| Gene ID | BnaC02G0145300ZS |
| Gene Name | NA |
| Transcript ID | BnaC02T0145300ZS |
| Protein ID | |
| Gene ID | BnaC02G0145300ZS |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 1.00E-10 |
| Motif start | 195 |
| Motif end | 252 |
| Protein seq | >BnaC02T0145300ZS MKNNNNTSSYDSSLSPSSSSSSHQNWLSFSLSNNNNFNSSSNPNLATSTSDHPHPSHLSLFQAFSPTPVHRQDESPGASS GDATAVLSMYPGGPKLENFLGGGTTTTTGQMQQGQSLGDVVFSSNVEQPRHPPSAAEIYDYELKSIAASFLGNYSGGHSS EVSSGQKQQNSPTATEVSPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAA RAYDLAALKYWGPTTTTNFPISNYELELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK DLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIASCNLPVGGLNSKPSPATPALDKQVDISPSDPPSLTT PSLTFNVATPVHDHEGTFFHIGIPIKQDPAAHYWSNVFGFPPNLKTETRPVATFGSDLHNFSSGFPIMPAMQDEGNNFGG GFVESEGYNNHSAASSPVSAIPLRSAVDDGNAGYGGNINWISNNTPNSYQTAKSNLSVLQTPVFGLE* |
| CDS seq | >BnaC02T0145300ZS ATGAAGAACAATAACAACACTTCTAGCTATGATTCTTCTTTGTCTCCTTCTTCTTCATCTTCTTCCCACCAGAACTGGCT CTCATTTTCTCTCTCCAACAACAATAACTTCAACTCTTCCTCAAACCCTAATCTCGCCACCTCCACATCTGATCATCCTC ACCCTTCTCACCTCTCTCTCTTTCAAGCTTTCTCCCCAACCCCAGTTCACCGGCAAGATGAGTCACCCGGAGCTTCCAGC GGCGATGCCACAGCGGTTCTTTCCATGTACCCTGGCGGTCCAAAACTCGAGAATTTCCTCGGCGGTGGAACCACAACGAC GACAGGACAAATGCAACAAGGTCAATCTCTCGGCGACGTTGTCTTCTCTTCGAACGTAGAGCAGCCACGTCATCCTCCGT CGGCCGCCGAGATCTATGACTATGAGCTCAAATCCATAGCTGCTAGCTTTCTCGGGAACTATTCAGGTGGACACTCATCG GAAGTATCTAGCGGACAAAAACAACAAAACTCTCCAACTGCCACAGAGGTTTCCCCGACGCCAAAGAAGAATGTAGAGAG TTTCGGACAACGTACTTCGATTTATAGAGGGGTCACAAGGCATAGATGGACTGGAAGATACGAAGCTCATCTATGGGATA ACAGTTGCCGAAGAGAAGGCCAAAGCAGAAAAGGAAGACAAGTTTATTTAGGTGGTTATGACAAGGAAGACAAAGCTGCT AGAGCTTATGATCTTGCAGCTCTTAAGTATTGGGGTCCTACAACTACTACGAATTTCCCAATATCGAATTATGAGCTTGA ACTTGAAGAGATGAAACACATGACTCGACAAGAGTTTGTTGCTTCTCTGAGACGGAAAAGCAGTGGGTTCTCTAGGGGTG CCTCCATGTACAGAGGTGTTACTAGACATCATCAGCATGGTCGATGGCAGGCACGAATTGGAAGGGTTGCAGGAAACAAA GACCTTTACCTTGGCACATTCAGCACTCAAGAGGAGGCTGCAGAGGCTTATGATATAGCGGCTATTAAGTTCCGTGGGCT AAATGCAGTAACAAACTTTGATATCAGCCGCTATGATGTCAAGTCGATCGCTAGCTGTAACCTTCCCGTGGGTGGACTAA ACTCTAAACCATCTCCGGCAACCCCAGCCCTTGACAAACAAGTTGATATATCTCCGTCTGATCCTCCATCTCTGACCACA CCATCACTCACCTTCAACGTGGCAACACCGGTCCATGACCATGAAGGAACTTTTTTCCACATCGGAATACCGATCAAACA AGACCCAGCTGCTCATTACTGGTCTAACGTTTTTGGATTCCCGCCAAACCTGAAAACCGAGACCCGACCAGTAGCAACCT TTGGGTCAGATCTTCACAACTTCTCTTCGGGATTTCCTATAATGCCGGCAATGCAAGACGAAGGAAACAACTTTGGTGGT GGGTTTGTTGAGTCAGAAGGGTATAACAATCATTCAGCTGCATCAAGTCCTGTCTCAGCAATTCCTCTGCGCTCAGCGGT AGATGACGGTAACGCAGGATATGGTGGGAACATAAATTGGATAAGTAACAACACTCCAAATTCTTACCAAACTGCCAAGT CAAATCTCTCCGTCTTGCAAACTCCGGTTTTTGGATTGGAATGA |
Bn_scaffoldC02:10485795-10485803:+ does not have available information here.