| Microexon ID | Bn_scaffoldC01:44671785-44671793:- |
| Species | Brassica Napus | Coordinates | scaffoldC01:44671785..44671793 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTACTTGG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAATAGTTGTAGAAGAGAAGGCCAGTCTAGGAAAGGAAGACAAGTTTACTTGGGTGGGTATGACAAAGAAGATAAAGCAGCGAGATCATATGATCTAGCCGCA |
| Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAA |
| Microexon-tag spanning region | 44671635-44671979 |
| Microexon-tag prediction score | 0.9621 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC01T0385300ZSx |
| Reference Transcript ID | BnaC01T0385300ZS |
| Gene ID | BnaC01G0385300ZS |
| Gene Name | NA |
| Transcript ID | BnaC01T0385300ZS |
| Protein ID | |
| Gene ID | BnaC01G0385300ZS |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 6.30E-10 |
| Motif start | 177 |
| Motif end | 234 |
| Protein seq | >BnaC01T0385300ZS MNSNNWLGFPLPPNQSSLPPHEYNLGLVSDHMDNPFHTQEWNMINPHGGGEGGEVPKVADFLGVSKPDENQTDHLVAYND SDYYFHTNSLMPSVQSNDVVVACDSNTPNNSYELQESANNLQSLTLSMGTTGGNSAAAKASPSEATGDNTSGGALAVVET ATPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALKYWGPSTTTN FPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYD IAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKEAQALESSRKREAEMIALGSSFQYGGGSSSGGSGSSSS RLQLQPYPLSIQQPLEPFLSLQNNDISHYNTNAHDASSFNHHSYIQTQLHLHQQTNNYLQQQSSQNSQQLYNAYLQSNPA LLHGLVSTSIVDNNNGVSNGSYNAAAFLVNHGIGIGSSSTVGSTEEFQTVKTDYDMPPSDGTGEYGGWTGEPVQGSNPGG VFTMWNE* |
| CDS seq | >BnaC01T0385300ZS ATGAATTCAAACAACTGGCTTGGCTTTCCCCTTCCACCAAACCAGTCTTCTTTGCCTCCTCACGAATACAACCTTGGCCT GGTCAGCGACCATATGGACAACCCTTTCCATACACAAGAGTGGAATATGATCAATCCACACGGCGGAGGAGAAGGAGGAG AGGTTCCCAAGGTGGCTGATTTTCTCGGTGTGAGCAAACCAGACGAAAACCAAACCGACCACCTCGTAGCTTACAACGAC TCAGACTACTACTTCCATACCAACAGCTTGATGCCTAGCGTCCAATCAAACGACGTCGTCGTAGCTTGTGACTCTAACAC TCCTAACAATAGCTATGAGCTTCAAGAGAGTGCTAACAATCTACAGTCATTGACTTTGTCCATGGGGACCACCGGTGGTA ATAGCGCCGCAGCCAAAGCTTCGCCGTCGGAGGCCACCGGCGATAACACTAGCGGTGGTGCACTAGCCGTTGTTGAGACG GCCACGCCTAGACGTGCTTTGGACACTTTCGGACAACGAACCTCGATCTATCGTGGTGTCACAAGGCATCGATGGACCGG TCGATATGAAGCTCACCTGTGGGATAATAGTTGTAGAAGAGAAGGCCAGTCTAGGAAAGGAAGACAAGTTTACTTGGGTG GGTATGACAAAGAAGATAAAGCAGCGAGATCATATGATCTAGCCGCACTTAAGTACTGGGGTCCCTCGACTACTACTAAT TTCCCGATAACTAACTACGAGAAAGAAGTAGAGGAAATGAAGCACATGACGAGACAAGAGTTCGTGGCGGCTATTAGAAG GAAAAGTAGTGGATTCTCACGAGGCGCTTCGATGTATCGAGGAGTTACAAGGCATCACCAACATGGAAGATGGCAAGCAA GGATCGGCCGAGTCGCCGGAAACAAAGACCTCTACTTGGGAACTTTTAGCACTGAGGAAGAAGCAGCAGAAGCTTATGAT ATAGCCGCGATAAAGTTCAGAGGACTCAACGCAGTGACCAACTTCGAGATCAACCGGTACGACGTGAAAGCTATCCTAGA GAGCAGCACTCTTCCCATAGGAGGAGGCGCGGCTAAGCGGCTCAAAGAAGCTCAGGCTCTTGAGTCTTCAAGGAAACGCG AGGCGGAGATGATAGCCCTTGGTTCAAGTTTCCAATATGGTGGTGGCTCGAGCTCAGGAGGCTCTGGCTCCAGCTCATCA AGGCTTCAGCTTCAACCTTACCCTCTAAGCATTCAACAACCATTGGAGCCTTTTCTATCTCTACAGAACAATGACATCTC TCACTATAATACCAATGCTCATGATGCTTCCTCCTTTAATCACCATAGCTATATCCAGACGCAGCTTCATCTTCACCAAC AAACCAACAATTACTTGCAGCAACAATCGAGTCAGAACTCGCAGCAGCTCTATAACGCTTATCTTCAAAGCAATCCGGCT TTGCTTCATGGTCTTGTCTCTACCTCAATCGTTGACAATAACAATGGAGTATCTAACGGTAGCTACAACGCTGCAGCGTT TCTTGTGAACCACGGCATTGGTATTGGGTCGAGCTCCACCGTTGGATCTACCGAGGAGTTTCAAACTGTTAAAACAGACT ACGATATGCCTCCGAGTGATGGCACAGGAGAGTACGGTGGTTGGACTGGTGAGCCTGTTCAGGGGTCGAATCCTGGTGGT GTTTTCACTATGTGGAATGAGTGA |
Bn_scaffoldC01:44671785-44671793:- does not have available information here.