| Microexon ID | Bn_scaffoldA10:21556181-21556189:+ |
| Species | Brassica Napus | Coordinates | scaffoldA10:21556181..21556189 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTTATTTGG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAATAGTTGTAAACGAGAAGGCCAAACGCGCAAAGGAAGACAAGTTTATTTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGGGCTTATGATTTAGCCGCA |
| Microexon-tag Amino Acid Seq | WDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAA |
| Microexon-tag spanning region | 21556011-21556342 |
| Microexon-tag prediction score | 0.9619 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA10T0195000ZSx |
| Reference Transcript ID | BnaA10T0195000ZS |
| Gene ID | BnaA10G0195000ZS |
| Gene Name | NA |
| Transcript ID | BnaA10T0195000ZS |
| Protein ID | |
| Gene ID | BnaA10G0195000ZS |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 2.60E-11 |
| Motif start | 211 |
| Motif end | 268 |
| Protein seq | >BnaA10T0195000ZS MNNNWLGFSLSPYEQNHHRKDVCSSTTTTAVDVAGEYCYDPTAASDESSAIQTSFPSPFGVVLDAFTRDNNSHSRDWDIN GSACNNIHNDEQDGPKLENFLGRTTTIYNTNENVGDIDGSGCYGGGDGGGGSLGLSMIKTWLRNQPVDNVDNQENGNGAK GLSLSMNSSTSCDNNNYSSNNLVAQGKTIDDSVEATPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRK GRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEIEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHH QHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPIGSAAKRLKEANRP VPSMMMISNNVSESENNASGWQNAAVQHHQGVDLSLLQQHQERYNGYYYNGGNLSSESARACFKQEDDQHHFLSNTQSLM TNIDHQSSVSDDSVTVCGNVVGYGGYQGFAAPVNCDAYAASEFDYNARNHYYFAQQQQTQHSPGGDFPAAMTNNVGSNMY YHGEGGGEVAPTFTVWNDN* |
| CDS seq | >BnaA10T0195000ZS ATGAATAATAACTGGTTAGGCTTTTCTCTCTCTCCTTATGAACAAAATCACCATCGTAAGGACGTCTGCTCTTCCACCAC CACAACCGCCGTAGATGTCGCCGGAGAGTACTGTTACGATCCGACCGCTGCCTCCGATGAGTCTTCAGCCATCCAAACAT CGTTTCCTTCTCCCTTTGGTGTCGTCCTCGATGCTTTCACCAGAGACAACAATAGTCACTCCCGAGATTGGGACATCAAT GGTAGTGCATGTAATAACATCCACAATGATGAGCAAGATGGACCAAAGCTTGAGAATTTCCTTGGCCGCACCACCACGAT TTACAACACCAACGAAAACGTTGGAGATATCGATGGAAGTGGGTGTTATGGAGGAGGAGACGGTGGTGGTGGCTCACTAG GACTTTCGATGATAAAGACATGGCTGAGAAATCAACCCGTGGATAATGTTGATAATCAAGAAAATGGCAATGGTGCAAAA GGCCTGTCCCTCTCAATGAACTCATCTACTTCTTGTGATAACAACAACTACAGCAGTAACAACCTTGTTGCCCAAGGGAA GACTATTGATGATAGCGTTGAAGCTACACCGAAGAAAACTATTGAGAGTTTTGGACAGAGGACGTCTATATACCGCGGTG TTACAAGGCATCGGTGGACAGGAAGATATGAGGCACATTTATGGGATAATAGTTGTAAACGAGAAGGCCAAACGCGCAAA GGAAGACAAGTTTATTTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGGGCTTATGATTTAGCCGCACTCAAGTATTG GGGAACCACCACTACTACTAACTTCCCCATGAGCGAATATGAGAAAGAGATAGAAGAGATGAAGCACATGACAAGGCAAG AGTATGTTGCCTCACTTCGCAGGAAAAGTAGTGGTTTCTCTCGTGGTGCATCGATTTATCGTGGAGTAACAAGACATCAC CAACATGGAAGATGGCAAGCTAGGATAGGAAGAGTCGCCGGTAACAAAGACCTCTACTTGGGAACTTTTGGCACACAAGA AGAAGCTGCAGAGGCATACGACATTGCGGCCATCAAATTCAGAGGATTAACCGCAGTGACTAACTTCGACATGAACAGAT ACAACGTTAAAGCAATCCTCGAAAGCCCTAGTCTTCCTATTGGTAGCGCCGCAAAACGTCTCAAGGAGGCTAACCGTCCG GTTCCAAGTATGATGATGATCAGTAATAACGTTTCAGAGAGTGAGAATAATGCTAGCGGTTGGCAAAACGCTGCGGTTCA GCATCATCAGGGAGTAGATTTGAGCTTATTGCAGCAACATCAAGAGAGGTACAATGGTTATTATTACAATGGAGGAAACT TGTCTTCGGAGAGTGCTAGGGCTTGTTTCAAACAAGAGGATGATCAACACCATTTCTTGAGCAACACGCAGAGCCTCATG ACTAATATCGATCATCAAAGTTCTGTTTCAGATGATTCGGTTACTGTTTGTGGAAATGTTGTTGGTTATGGTGGTTATCA AGGATTTGCAGCCCCGGTTAACTGCGATGCCTACGCTGCTAGTGAGTTTGACTATAACGCAAGAAACCATTATTACTTTG CTCAGCAGCAGCAGACCCAGCATTCGCCAGGAGGAGATTTTCCCGCGGCAATGACGAATAATGTTGGCTCTAATATGTAT TACCATGGGGAAGGTGGTGGAGAAGTTGCTCCAACATTTACAGTTTGGAACGACAATTAG |
Bn_scaffoldA10:21556181-21556189:+ does not have available information here.