| Microexon ID | Bn_scaffoldA05:11632341-11632349:- |
| Species | Brassica Napus | Coordinates | scaffoldA05:11632341..11632349 |
| Microexon Cluster ID | MEP21 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | AP2 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TCTACTTAG |
| Microexon Amino Acid seq | VYLG |
| Microexon-tag DNA Seq | TGGGATAATAGTTGTAGAAGAGAAGGACAATCAAGGAAAGGAAGACAAGTCTACTTAGGTGGGTATGACAAAGAAGAGAAAGCAGCAAGAGCATATGATTTAGCTGCA |
| Microexon-tag Amino Acid Seq | WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA |
| Microexon-tag spanning region | 11632195-11632571 |
| Microexon-tag prediction score | 0.9661 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA05T0174000ZSx |
| Reference Transcript ID | BnaA05T0174000ZS |
| Gene ID | BnaA05G0174000ZS |
| Gene Name | NA |
| Transcript ID | BnaA05T0174000ZS |
| Protein ID | |
| Gene ID | BnaA05G0174000ZS |
| Gene Name | |
| Pfam domain motif | AP2 |
| Motif E-value | 1.70E-11 |
| Motif start | 189 |
| Motif end | 246 |
| Protein seq | >BnaA05T0174000ZS MNSNNWLAFPLSPTHSSLPPLIHSSQTSQFNLGLVNDNMDNPFENQEWNMINPHGGGGEGGEIPKVADFLGVSKSDNHQA DLVPYNDIHQTNDSDYYFQTNSLLPTVVTCASNTPNNYELQESAHNLQSLTLSMGSAGDAAAAAAAVKASPGETSADNSS STTNISGGTTVEAAPRRTVETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLA ALKYWGPSTTTNFPITNYEKEVEEMKNMTRQEFVAAIRRLKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLG TFTTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALSSNFHQYG AASGSSSGLQLQPYPLSIQQPFEHLHHQPLLTLQNNNDVSQYNTNVHDSYSYIQTQLHLHQQQTNNYLQSSSHNSQLYNA YLQSNPGLLHGFVSDNNNTPAVYGNNGIGIGSTSTVGTSAEEEFPTVKVDYDMPPLGGATGCERWTNGEHGQGSNPGGVF TMWNE* |
| CDS seq | >BnaA05T0174000ZS ATGAATTCTAACAACTGGCTTGCCTTTCCTCTATCACCAACCCATTCTTCTTTGCCTCCTCTCATCCACTCCTCACAAAC CTCTCAATTCAATCTCGGCTTGGTCAACGACAATATGGACAACCCTTTTGAAAACCAAGAATGGAATATGATCAATCCAC ACGGTGGAGGCGGAGAAGGAGGAGAGATTCCAAAAGTGGCTGATTTCTTAGGAGTTAGCAAGTCGGACAATCATCAAGCC GACCTCGTACCGTACAACGACATTCATCAAACCAATGACTCAGATTACTACTTCCAAACAAATAGTCTGTTACCTACGGT TGTCACTTGTGCCTCTAACACTCCTAATAACTATGAGCTTCAAGAGAGTGCCCACAATTTGCAATCTCTCACCCTTTCAA TGGGAAGTGCCGGAGACGCCGCTGCTGCAGCGGCGGCCGTTAAAGCCTCGCCTGGTGAGACCAGCGCGGATAATAGTAGT AGCACTACTAACATAAGTGGAGGAACCACCGTTGAAGCTGCACCTAGACGGACCGTGGAAACTTTTGGACAACGAACCTC TATCTATCGTGGTGTTACAAGACATAGATGGACCGGTAGATATGAAGCTCATCTTTGGGATAATAGTTGTAGAAGAGAAG GACAATCAAGGAAAGGAAGACAAGTCTACTTAGGTGGGTATGACAAAGAAGAGAAAGCAGCAAGAGCATATGATTTAGCT GCACTCAAATATTGGGGCCCCTCTACTACTACCAACTTTCCGATTACTAACTATGAGAAGGAAGTTGAGGAGATGAAAAA TATGACGAGACAAGAGTTTGTGGCTGCTATTAGAAGGTTGAAAAGTAGCGGATTCTCGCGTGGTGCATCGATGTATCGAG GAGTAACAAGGCATCATCAACATGGAAGATGGCAAGCAAGGATTGGCCGAGTTGCTGGAAACAAAGATCTCTACTTGGGA ACTTTCACCACAGAGGAAGAAGCAGCAGAAGCATACGACATAGCTGCAATAAAGTTTCGAGGTCTAAACGCGGTTACGAA TTTTGAGATTAACCGGTACGATGTAAAAGCTATCCTAGAGAGCAACACACTTCCTATAGGAGGTGGTGCAGCTAAACGGC TGAAAGAAGCTCAAGCTCTAGAATCATCAAGAAAACGTGAGGAAATGATAGCCCTCAGCTCAAATTTCCATCAGTATGGT GCAGCGAGCGGCTCTAGCTCTGGGCTTCAGCTTCAACCTTACCCACTAAGCATTCAACAACCTTTTGAGCATCTTCATCA CCAGCCTCTACTTACCCTACAGAACAACAACGATGTCTCACAGTATAATACTAACGTTCATGATTCCTACAGTTACATCC AGACGCAGCTTCATCTTCACCAACAACAAACCAACAATTACTTGCAGTCTTCTAGTCACAACTCGCAACTCTACAATGCT TATCTTCAGAGCAATCCTGGTTTGCTTCACGGATTTGTCTCTGATAATAACAACACTCCAGCGGTTTATGGAAACAACGG GATTGGTATTGGGTCAACCTCCACAGTAGGAACATCGGCCGAGGAAGAGTTTCCCACGGTTAAAGTTGATTACGATATGC CTCCTTTAGGTGGAGCCACAGGGTGTGAACGATGGACTAATGGAGAGCATGGTCAGGGGTCAAATCCAGGAGGTGTCTTC ACAATGTGGAATGAATAA |
Bn_scaffoldA05:11632341-11632349:- does not have available information here.