Microexon ID At_5:5744157-5744165:-
Species Arabidopsis thaliana
Coordinates 5:5744157..5744165
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATCTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAATAGTTGCAAAAGAGAAGGCCAGACTCGCAAAGGAAGACAAGTTTATCTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGGGCTTACGATTTAGCCGCA
Microexon-tag Amino Acid Seq WDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAA
Microexon-tag spanning region5744014-5744330
Microexon-tag prediction score0.9713
Overlapped with the annotated transcript (%) 100
New Transcript ID AT5G17430.1x
Reference Transcript ID AT5G17430.1
Gene ID AT5G17430
Gene Name BBM
Transcript ID AT5G17430.1
Protein ID AT5G17430.1
Gene ID AT5G17430
Gene Name BBM
Pfam domain motif AP2
Motif E-value 1e-12
Motif start 210
Motif end 268
Protein seq >AT5G17430.1
MNSMNNWLGFSLSPHDQNHHRTDVDSSTTRTAVDVAGGYCFDLAAPSDESSAVQTSFLSPFGVTLEAFTRDNNSHSRDWD
INGGACNNINNNEQNGPKLENFLGRTTTIYNTNETVVDGNGDCGGGDGGGGGSLGLSMIKTWLSNHSVANANHQDNGNGA
RGLSLSMNSSTSDSNNYNNNDDVVQEKTIVDVVETTPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRK
GRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHH
QHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPIGSSAKRLKDVNNP
VPAMMISNNVSESANNVSGWQNTAFQHHQGMDLSLLQQQQERYVGYYNGGNLSTESTRVCFKQEEEQQHFLRNSPSHMTN
VDHHSSTSDDSVTVCGNVVSYGGYQGFAIPVGTSVNYDPFTAAEIAYNARNHYYYAQHQQQQQIQQSPGGDFPVAISNNH
SSNMYFHGEGGGEGAPTFSVWNDT*
CDS seq >AT5G17430.1
ATGAACTCGATGAATAACTGGTTAGGCTTCTCTCTCTCTCCTCATGATCAAAATCATCACCGTACGGATGTTGACTCCTC
CACCACCAGAACCGCCGTAGATGTTGCCGGAGGGTACTGTTTTGATCTGGCCGCTCCCTCCGATGAATCTTCTGCCGTTC
AAACATCTTTTCTTTCTCCTTTCGGTGTCACCCTCGAAGCTTTCACCAGAGACAATAATAGTCACTCCCGAGATTGGGAC
ATCAATGGTGGTGCATGCAATAACATTAACAATAACGAACAAAATGGACCAAAGCTTGAGAATTTCCTCGGCCGCACCAC
CACGATTTACAATACCAACGAGACCGTTGTAGATGGAAATGGCGATTGTGGAGGAGGAGACGGTGGTGGTGGCGGCTCAC
TAGGCCTTTCGATGATAAAAACATGGCTGAGTAATCATTCGGTTGCTAATGCTAATCATCAAGACAATGGTAACGGTGCA
CGAGGCTTGTCCCTCTCTATGAATTCATCTACTAGTGATAGCAACAACTACAACAACAATGATGATGTCGTCCAAGAGAA
GACTATTGTTGATGTCGTAGAAACTACACCGAAGAAAACTATTGAGAGTTTTGGACAAAGGACGTCTATATACCGCGGTG
TTACAAGGCATCGGTGGACAGGTAGATACGAGGCACATTTATGGGACAATAGTTGCAAAAGAGAAGGCCAGACTCGCAAA
GGAAGACAAGTTTATCTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGGGCTTACGATTTAGCCGCACTAAAGTATTG
GGGAACCACCACTACTACTAACTTCCCCTTGAGTGAATATGAGAAAGAGGTAGAAGAGATGAAGCACATGACGAGGCAAG
AGTATGTTGCCTCTCTGCGCAGGAAAAGTAGTGGTTTCTCTCGTGGTGCATCGATTTATCGAGGAGTAACAAGGCATCAC
CAACATGGAAGGTGGCAAGCTAGGATCGGAAGAGTCGCCGGTAACAAAGACCTCTACTTGGGAACTTTCGGCACACAGGA
AGAGGCTGCTGAGGCTTATGACATTGCAGCCATTAAATTCAGAGGATTAAGCGCAGTGACTAACTTCGACATGAACAGAT
ACAATGTTAAAGCAATCCTCGAGAGCCCGAGTCTACCTATTGGTAGTTCTGCGAAACGTCTCAAGGACGTTAATAATCCG
GTTCCAGCTATGATGATTAGTAATAACGTTTCAGAGAGTGCAAATAATGTTAGCGGTTGGCAAAACACTGCGTTTCAGCA
TCATCAGGGAATGGATTTGAGCTTATTGCAGCAACAGCAGGAGAGGTACGTTGGTTATTACAATGGAGGAAACTTGTCTA
CCGAGAGTACTAGGGTTTGTTTCAAACAAGAGGAGGAACAACAACACTTCTTGAGAAACTCGCCGAGTCACATGACTAAT
GTTGATCATCATAGCTCGACCTCTGATGATTCTGTTACCGTTTGTGGAAATGTTGTTAGTTATGGTGGTTATCAAGGATT
CGCAATCCCTGTTGGAACATCGGTTAATTACGATCCCTTTACTGCTGCTGAGATTGCTTACAACGCAAGAAATCATTATT
ACTATGCTCAGCATCAGCAACAACAGCAGATTCAGCAGTCGCCGGGAGGAGATTTTCCGGTGGCGATTTCGAATAACCAT
AGCTCTAACATGTACTTTCACGGGGAAGGTGGTGGAGAAGGGGCTCCAACGTTTTCAGTTTGGAACGACACTTAG
Microexon DNA seq TTTATCTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGACAATAGTTGCAAAAGAGAAGGCCAGACTCGCAAAGGAAGACAAGTTTATCTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGGGCTTACGATTTAGCCGCA
Microexon-tag Amino Acid seq WDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAA
Transcript ID AT5G17430.1
Gene ID At.23356
Gene Name BBM
Pfam domain motif AP2
Motif E-value 1e-12
Motif start 210
Motif end 268
Protein seq >AT5G17430.1
MNSMNNWLGFSLSPHDQNHHRTDVDSSTTRTAVDVAGGYCFDLAAPSDESSAVQTSFLSPFGVTLEAFTRDNNSHSRDWD
INGGACNNINNNEQNGPKLENFLGRTTTIYNTNETVVDGNGDCGGGDGGGGGSLGLSMIKTWLSNHSVANANHQDNGNGA
RGLSLSMNSSTSDSNNYNNNDDVVQEKTIVDVVETTPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRK
GRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHH
QHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPIGSSAKRLKDVNNP
VPAMMISNNVSESANNVSGWQNTAFQHHQGMDLSLLQQQQERYVGYYNGGNLSTESTRVCFKQEEEQQHFLRNSPSHMTN
VDHHSSTSDDSVTVCGNVVSYGGYQGFAIPVGTSVNYDPFTAAEIAYNARNHYYYAQHQQQQQIQQSPGGDFPVAISNNH
SSNMYFHGEGGGEGAPTFSVWNDT*
CDS seq >AT5G17430.1
ATGAACTCGATGAATAACTGGTTAGGCTTCTCTCTCTCTCCTCATGATCAAAATCATCACCGTACGGATGTTGACTCCTC
CACCACCAGAACCGCCGTAGATGTTGCCGGAGGGTACTGTTTTGATCTGGCCGCTCCCTCCGATGAATCTTCTGCCGTTC
AAACATCTTTTCTTTCTCCTTTCGGTGTCACCCTCGAAGCTTTCACCAGAGACAATAATAGTCACTCCCGAGATTGGGAC
ATCAATGGTGGTGCATGCAATAACATTAACAATAACGAACAAAATGGACCAAAGCTTGAGAATTTCCTCGGCCGCACCAC
CACGATTTACAATACCAACGAGACCGTTGTAGATGGAAATGGCGATTGTGGAGGAGGAGACGGTGGTGGTGGCGGCTCAC
TAGGCCTTTCGATGATAAAAACATGGCTGAGTAATCATTCGGTTGCTAATGCTAATCATCAAGACAATGGTAACGGTGCA
CGAGGCTTGTCCCTCTCTATGAATTCATCTACTAGTGATAGCAACAACTACAACAACAATGATGATGTCGTCCAAGAGAA
GACTATTGTTGATGTCGTAGAAACTACACCGAAGAAAACTATTGAGAGTTTTGGACAAAGGACGTCTATATACCGCGGTG
TTACAAGGCATCGGTGGACAGGTAGATACGAGGCACATTTATGGGACAATAGTTGCAAAAGAGAAGGCCAGACTCGCAAA
GGAAGACAAGTTTATCTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGGGCTTACGATTTAGCCGCACTAAAGTATTG
GGGAACCACCACTACTACTAACTTCCCCTTGAGTGAATATGAGAAAGAGGTAGAAGAGATGAAGCACATGACGAGGCAAG
AGTATGTTGCCTCTCTGCGCAGGAAAAGTAGTGGTTTCTCTCGTGGTGCATCGATTTATCGAGGAGTAACAAGGCATCAC
CAACATGGAAGGTGGCAAGCTAGGATCGGAAGAGTCGCCGGTAACAAAGACCTCTACTTGGGAACTTTCGGCACACAGGA
AGAGGCTGCTGAGGCTTATGACATTGCAGCCATTAAATTCAGAGGATTAAGCGCAGTGACTAACTTCGACATGAACAGAT
ACAATGTTAAAGCAATCCTCGAGAGCCCGAGTCTACCTATTGGTAGTTCTGCGAAACGTCTCAAGGACGTTAATAATCCG
GTTCCAGCTATGATGATTAGTAATAACGTTTCAGAGAGTGCAAATAATGTTAGCGGTTGGCAAAACACTGCGTTTCAGCA
TCATCAGGGAATGGATTTGAGCTTATTGCAGCAACAGCAGGAGAGGTACGTTGGTTATTACAATGGAGGAAACTTGTCTA
CCGAGAGTACTAGGGTTTGTTTCAAACAAGAGGAGGAACAACAACACTTCTTGAGAAACTCGCCGAGTCACATGACTAAT
GTTGATCATCATAGCTCGACCTCTGATGATTCTGTTACCGTTTGTGGAAATGTTGTTAGTTATGGTGGTTATCAAGGATT
CGCAATCCCTGTTGGAACATCGGTTAATTACGATCCCTTTACTGCTGCTGAGATTGCTTACAACGCAAGAAATCATTATT
ACTATGCTCAGCATCAGCAACAACAGCAGATTCAGCAGTCGCCGGGAGGAGATTTTCCGGTGGCGATTTCGAATAACCAT
AGCTCTAACATGTACTTTCACGGGGAAGGTGGTGGAGAAGGGGCTCCAACGTTTTCAGTTTGGAACGACACTTAG