
Microexon ID | At_5:5744157-5744165:- |
Species | Arabidopsis thaliana | Coordinates | 5:5744157..5744165 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAATAGTTGCAAAAGAGAAGGCCAGACTCGCAAAGGAAGACAAGTTTATCTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGGGCTTACGATTTAGCCGCA |
Microexon-tag Amino Acid Seq | WDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAA |
Microexon-tag spanning region | 5744014-5744330 |
Microexon-tag prediction score | 0.9713 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT5G17430.1x |
Reference Transcript ID | AT5G17430.1 |
Gene ID | AT5G17430 |
Gene Name | BBM |
Transcript ID | AT5G17430.1 |
Protein ID | AT5G17430.1 |
Gene ID | AT5G17430 |
Gene Name | BBM |
Pfam domain motif | AP2 |
Motif E-value | 1e-12 |
Motif start | 210 |
Motif end | 268 |
Protein seq | >AT5G17430.1 MNSMNNWLGFSLSPHDQNHHRTDVDSSTTRTAVDVAGGYCFDLAAPSDESSAVQTSFLSPFGVTLEAFTRDNNSHSRDWD INGGACNNINNNEQNGPKLENFLGRTTTIYNTNETVVDGNGDCGGGDGGGGGSLGLSMIKTWLSNHSVANANHQDNGNGA RGLSLSMNSSTSDSNNYNNNDDVVQEKTIVDVVETTPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRK GRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHH QHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPIGSSAKRLKDVNNP VPAMMISNNVSESANNVSGWQNTAFQHHQGMDLSLLQQQQERYVGYYNGGNLSTESTRVCFKQEEEQQHFLRNSPSHMTN VDHHSSTSDDSVTVCGNVVSYGGYQGFAIPVGTSVNYDPFTAAEIAYNARNHYYYAQHQQQQQIQQSPGGDFPVAISNNH SSNMYFHGEGGGEGAPTFSVWNDT* |
CDS seq | >AT5G17430.1 ATGAACTCGATGAATAACTGGTTAGGCTTCTCTCTCTCTCCTCATGATCAAAATCATCACCGTACGGATGTTGACTCCTC CACCACCAGAACCGCCGTAGATGTTGCCGGAGGGTACTGTTTTGATCTGGCCGCTCCCTCCGATGAATCTTCTGCCGTTC AAACATCTTTTCTTTCTCCTTTCGGTGTCACCCTCGAAGCTTTCACCAGAGACAATAATAGTCACTCCCGAGATTGGGAC ATCAATGGTGGTGCATGCAATAACATTAACAATAACGAACAAAATGGACCAAAGCTTGAGAATTTCCTCGGCCGCACCAC CACGATTTACAATACCAACGAGACCGTTGTAGATGGAAATGGCGATTGTGGAGGAGGAGACGGTGGTGGTGGCGGCTCAC TAGGCCTTTCGATGATAAAAACATGGCTGAGTAATCATTCGGTTGCTAATGCTAATCATCAAGACAATGGTAACGGTGCA CGAGGCTTGTCCCTCTCTATGAATTCATCTACTAGTGATAGCAACAACTACAACAACAATGATGATGTCGTCCAAGAGAA GACTATTGTTGATGTCGTAGAAACTACACCGAAGAAAACTATTGAGAGTTTTGGACAAAGGACGTCTATATACCGCGGTG TTACAAGGCATCGGTGGACAGGTAGATACGAGGCACATTTATGGGACAATAGTTGCAAAAGAGAAGGCCAGACTCGCAAA GGAAGACAAGTTTATCTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGGGCTTACGATTTAGCCGCACTAAAGTATTG GGGAACCACCACTACTACTAACTTCCCCTTGAGTGAATATGAGAAAGAGGTAGAAGAGATGAAGCACATGACGAGGCAAG AGTATGTTGCCTCTCTGCGCAGGAAAAGTAGTGGTTTCTCTCGTGGTGCATCGATTTATCGAGGAGTAACAAGGCATCAC CAACATGGAAGGTGGCAAGCTAGGATCGGAAGAGTCGCCGGTAACAAAGACCTCTACTTGGGAACTTTCGGCACACAGGA AGAGGCTGCTGAGGCTTATGACATTGCAGCCATTAAATTCAGAGGATTAAGCGCAGTGACTAACTTCGACATGAACAGAT ACAATGTTAAAGCAATCCTCGAGAGCCCGAGTCTACCTATTGGTAGTTCTGCGAAACGTCTCAAGGACGTTAATAATCCG GTTCCAGCTATGATGATTAGTAATAACGTTTCAGAGAGTGCAAATAATGTTAGCGGTTGGCAAAACACTGCGTTTCAGCA TCATCAGGGAATGGATTTGAGCTTATTGCAGCAACAGCAGGAGAGGTACGTTGGTTATTACAATGGAGGAAACTTGTCTA CCGAGAGTACTAGGGTTTGTTTCAAACAAGAGGAGGAACAACAACACTTCTTGAGAAACTCGCCGAGTCACATGACTAAT GTTGATCATCATAGCTCGACCTCTGATGATTCTGTTACCGTTTGTGGAAATGTTGTTAGTTATGGTGGTTATCAAGGATT CGCAATCCCTGTTGGAACATCGGTTAATTACGATCCCTTTACTGCTGCTGAGATTGCTTACAACGCAAGAAATCATTATT ACTATGCTCAGCATCAGCAACAACAGCAGATTCAGCAGTCGCCGGGAGGAGATTTTCCGGTGGCGATTTCGAATAACCAT AGCTCTAACATGTACTTTCACGGGGAAGGTGGTGGAGAAGGGGCTCCAACGTTTTCAGTTTGGAACGACACTTAG |
Microexon DNA seq | TTTATCTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAATAGTTGCAAAAGAGAAGGCCAGACTCGCAAAGGAAGACAAGTTTATCTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGGGCTTACGATTTAGCCGCA |
Microexon-tag Amino Acid seq | WDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAA |
Transcript ID | AT5G17430.1 |
Gene ID | At.23356 |
Gene Name | BBM |
Pfam domain motif | AP2 |
Motif E-value | 1e-12 |
Motif start | 210 |
Motif end | 268 |
Protein seq | >AT5G17430.1 MNSMNNWLGFSLSPHDQNHHRTDVDSSTTRTAVDVAGGYCFDLAAPSDESSAVQTSFLSPFGVTLEAFTRDNNSHSRDWD INGGACNNINNNEQNGPKLENFLGRTTTIYNTNETVVDGNGDCGGGDGGGGGSLGLSMIKTWLSNHSVANANHQDNGNGA RGLSLSMNSSTSDSNNYNNNDDVVQEKTIVDVVETTPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRK GRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHH QHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPIGSSAKRLKDVNNP VPAMMISNNVSESANNVSGWQNTAFQHHQGMDLSLLQQQQERYVGYYNGGNLSTESTRVCFKQEEEQQHFLRNSPSHMTN VDHHSSTSDDSVTVCGNVVSYGGYQGFAIPVGTSVNYDPFTAAEIAYNARNHYYYAQHQQQQQIQQSPGGDFPVAISNNH SSNMYFHGEGGGEGAPTFSVWNDT* |
CDS seq | >AT5G17430.1 ATGAACTCGATGAATAACTGGTTAGGCTTCTCTCTCTCTCCTCATGATCAAAATCATCACCGTACGGATGTTGACTCCTC CACCACCAGAACCGCCGTAGATGTTGCCGGAGGGTACTGTTTTGATCTGGCCGCTCCCTCCGATGAATCTTCTGCCGTTC AAACATCTTTTCTTTCTCCTTTCGGTGTCACCCTCGAAGCTTTCACCAGAGACAATAATAGTCACTCCCGAGATTGGGAC ATCAATGGTGGTGCATGCAATAACATTAACAATAACGAACAAAATGGACCAAAGCTTGAGAATTTCCTCGGCCGCACCAC CACGATTTACAATACCAACGAGACCGTTGTAGATGGAAATGGCGATTGTGGAGGAGGAGACGGTGGTGGTGGCGGCTCAC TAGGCCTTTCGATGATAAAAACATGGCTGAGTAATCATTCGGTTGCTAATGCTAATCATCAAGACAATGGTAACGGTGCA CGAGGCTTGTCCCTCTCTATGAATTCATCTACTAGTGATAGCAACAACTACAACAACAATGATGATGTCGTCCAAGAGAA GACTATTGTTGATGTCGTAGAAACTACACCGAAGAAAACTATTGAGAGTTTTGGACAAAGGACGTCTATATACCGCGGTG TTACAAGGCATCGGTGGACAGGTAGATACGAGGCACATTTATGGGACAATAGTTGCAAAAGAGAAGGCCAGACTCGCAAA GGAAGACAAGTTTATCTGGGAGGTTATGACAAAGAAGAAAAAGCAGCTAGGGCTTACGATTTAGCCGCACTAAAGTATTG GGGAACCACCACTACTACTAACTTCCCCTTGAGTGAATATGAGAAAGAGGTAGAAGAGATGAAGCACATGACGAGGCAAG AGTATGTTGCCTCTCTGCGCAGGAAAAGTAGTGGTTTCTCTCGTGGTGCATCGATTTATCGAGGAGTAACAAGGCATCAC CAACATGGAAGGTGGCAAGCTAGGATCGGAAGAGTCGCCGGTAACAAAGACCTCTACTTGGGAACTTTCGGCACACAGGA AGAGGCTGCTGAGGCTTATGACATTGCAGCCATTAAATTCAGAGGATTAAGCGCAGTGACTAACTTCGACATGAACAGAT ACAATGTTAAAGCAATCCTCGAGAGCCCGAGTCTACCTATTGGTAGTTCTGCGAAACGTCTCAAGGACGTTAATAATCCG GTTCCAGCTATGATGATTAGTAATAACGTTTCAGAGAGTGCAAATAATGTTAGCGGTTGGCAAAACACTGCGTTTCAGCA TCATCAGGGAATGGATTTGAGCTTATTGCAGCAACAGCAGGAGAGGTACGTTGGTTATTACAATGGAGGAAACTTGTCTA CCGAGAGTACTAGGGTTTGTTTCAAACAAGAGGAGGAACAACAACACTTCTTGAGAAACTCGCCGAGTCACATGACTAAT GTTGATCATCATAGCTCGACCTCTGATGATTCTGTTACCGTTTGTGGAAATGTTGTTAGTTATGGTGGTTATCAAGGATT CGCAATCCCTGTTGGAACATCGGTTAATTACGATCCCTTTACTGCTGCTGAGATTGCTTACAACGCAAGAAATCATTATT ACTATGCTCAGCATCAGCAACAACAGCAGATTCAGCAGTCGCCGGGAGGAGATTTTCCGGTGGCGATTTCGAATAACCAT AGCTCTAACATGTACTTTCACGGGGAAGGTGGTGGAGAAGGGGCTCCAACGTTTTCAGTTTGGAACGACACTTAG |